[package - 124i386-quarterly][science/minc2] Failed for minc2-2.2.00_12,1 in lib-depends
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Date: Thu, 25 May 2023 18:54:36 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: ports@FreeBSD.org
Log URL: https://pkg-status.freebsd.org/beefy4/data/124i386-quarterly/56368df6bdde/logs/minc2-2.2.00_12,1.log
Build URL: https://pkg-status.freebsd.org/beefy4/build.html?mastername=124i386-quarterly&build=56368df6bdde
Log:
=>> Building science/minc2
build started at Thu May 25 18:54:15 UTC 2023
port directory: /usr/ports/science/minc2
package name: minc2-2.2.00_12,1
building for: FreeBSD 124i386-quarterly-job-07 12.4-RELEASE-p2 FreeBSD 12.4-RELEASE-p2 i386
maintained by: ports@FreeBSD.org
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=======================<phase: check-sanity >============================
===> NOTICE:
The minc port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:
https://bugs.freebsd.org/bugzilla
More information about port maintainership is available at:
https://docs.freebsd.org/en/articles/contributing/#ports-contributing
===> License MIT accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> minc2-2.2.00_12,1 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.19.1_1.pkg
[124i386-quarterly-job-07] Installing pkg-1.19.1_1...
[124i386-quarterly-job-07] Extracting pkg-1.19.1_1: .......... done
===> minc2-2.2.00_12,1 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of minc2-2.2.00_12,1
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> NOTICE:
The minc port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:
https://bugs.freebsd.org/bugzilla
More information about port maintainership is available at:
https://docs.freebsd.org/en/articles/contributing/#ports-contributing
===> License MIT accepted by the user
===> Fetching all distfiles required by minc2-2.2.00_12,1 for building
===========================================================================
=======================<phase: checksum >============================
===> NOTICE:
The minc port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:
https://bugs.freebsd.org/bugzilla
More information about port maintainership is available at:
https://docs.freebsd.org/en/articles/contributing/#ports-contributing
===> License MIT accepted by the user
===> Fetching all distfiles required by minc2-2.2.00_12,1 for building
=> SHA256 Checksum OK for BIC-MNI-minc-release-2.2.00_GH0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> NOTICE:
The minc port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:
https://bugs.freebsd.org/bugzilla
More information about port maintainership is available at:
https://docs.freebsd.org/en/articles/contributing/#ports-contributing
===> License MIT accepted by the user
===> Fetching all distfiles required by minc2-2.2.00_12,1 for building
===> Extracting for minc2-2.2.00_12,1
=> SHA256 Checksum OK for BIC-MNI-minc-release-2.2.00_GH0.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for minc2-2.2.00_12,1
===> Applying FreeBSD patches for minc2-2.2.00_12,1 from /usr/ports/science/minc2/files
===========================================================================
=======================<phase: build-depends >============================
===> minc2-2.2.00_12,1 depends on executable: bison - not found
===> Installing existing package /packages/All/bison-3.8.2,1.pkg
[124i386-quarterly-job-07] Installing bison-3.8.2,1...
[124i386-quarterly-job-07] `-- Installing gettext-runtime-0.21.1...
[124i386-quarterly-job-07] | `-- Installing indexinfo-0.3.1...
[124i386-quarterly-job-07] | `-- Extracting indexinfo-0.3.1: .... done
[124i386-quarterly-job-07] `-- Extracting gettext-runtime-0.21.1: .......... done
[124i386-quarterly-job-07] `-- Installing libtextstyle-0.21.1...
[124i386-quarterly-job-07] `-- Extracting libtextstyle-0.21.1: .......... done
[124i386-quarterly-job-07] `-- Installing m4-1.4.19,1...
[124i386-quarterly-job-07] `-- Extracting m4-1.4.19,1: .......... done
[124i386-quarterly-job-07] `-- Installing readline-8.2.1...
[124i386-quarterly-job-07] `-- Extracting readline-8.2.1: .......... done
[124i386-quarterly-job-07] Extracting bison-3.8.2,1: .......... done
===> minc2-2.2.00_12,1 depends on executable: bison - found
===> Returning to build of minc2-2.2.00_12,1
===> minc2-2.2.00_12,1 depends on package: gmake>=4.3 - not found
===> Installing existing package /packages/All/gmake-4.3_2.pkg
[124i386-quarterly-job-07] Installing gmake-4.3_2...
[124i386-quarterly-job-07] Extracting gmake-4.3_2: .......... done
===> minc2-2.2.00_12,1 depends on package: gmake>=4.3 - found
===> Returning to build of minc2-2.2.00_12,1
===> minc2-2.2.00_12,1 depends on package: autoconf>=2.71 - not found
===> Installing existing package /packages/All/autoconf-2.71.pkg
[124i386-quarterly-job-07] Installing autoconf-2.71...
[124i386-quarterly-job-07] `-- Installing autoconf-switch-20220527...
[124i386-quarterly-job-07] `-- Extracting autoconf-switch-20220527: .......... done
[124i386-quarterly-job-07] `-- Installing perl5-5.32.1_3...
[124i386-quarterly-job-07] `-- Extracting perl5-5.32.1_3: .......... done
[124i386-quarterly-job-07] Extracting autoconf-2.71: .......... done
===> minc2-2.2.00_12,1 depends on package: autoconf>=2.71 - found
===> Returning to build of minc2-2.2.00_12,1
===> minc2-2.2.00_12,1 depends on package: automake>=1.16.5 - not found
===> Installing existing package /packages/All/automake-1.16.5.pkg
[124i386-quarterly-job-07] Installing automake-1.16.5...
[124i386-quarterly-job-07] Extracting automake-1.16.5: .......... done
===> minc2-2.2.00_12,1 depends on package: automake>=1.16.5 - found
===> Returning to build of minc2-2.2.00_12,1
===> minc2-2.2.00_12,1 depends on executable: libtoolize - not found
===> Installing existing package /packages/All/libtool-2.4.7_1.pkg
[124i386-quarterly-job-07] Installing libtool-2.4.7_1...
[124i386-quarterly-job-07] Extracting libtool-2.4.7_1: .......... done
===> minc2-2.2.00_12,1 depends on executable: libtoolize - found
===> Returning to build of minc2-2.2.00_12,1
===> minc2-2.2.00_12,1 depends on package: perl5>=5.32.r0<5.33 - found
===========================================================================
=======================<phase: lib-depends >============================
===> minc2-2.2.00_12,1 depends on shared library: libhdf5.so - not found
===> Installing existing package /packages/All/hdf5-1.12.2_1,1.pkg
[124i386-quarterly-job-07] Installing hdf5-1.12.2_1,1...
[124i386-quarterly-job-07] `-- Installing gcc12-12.2.0_5...
[124i386-quarterly-job-07] | `-- Installing binutils-2.40_4,1...
[124i386-quarterly-job-07] | | `-- Installing zstd-1.5.4...
[124i386-quarterly-job-07] | | `-- Installing liblz4-1.9.4,1...
[124i386-quarterly-job-07] | | `-- Extracting liblz4-1.9.4,1: .......... done
[124i386-quarterly-job-07] | | `-- Extracting zstd-1.5.4: .......... done
[124i386-quarterly-job-07] | `-- Extracting binutils-2.40_4,1: .......... done
[124i386-quarterly-job-07] | `-- Installing gmp-6.2.1...
[124i386-quarterly-job-07] | `-- Extracting gmp-6.2.1: .......... done
[124i386-quarterly-job-07] | `-- Installing mpc-1.2.1...
[124i386-quarterly-job-07] | | `-- Installing mpfr-4.2.0,1...
[124i386-quarterly-job-07] | | `-- Extracting mpfr-4.2.0,1: .......... done
[124i386-quarterly-job-07] | `-- Extracting mpc-1.2.1: ......... done
[124i386-quarterly-job-07] `-- Extracting gcc12-12.2.0_5: .......... done
[124i386-quarterly-job-07] `-- Installing libaec-1.0.6...
[124i386-quarterly-job-07] `-- Extracting libaec-1.0.6: .......... done
[124i386-quarterly-job-07] Extracting hdf5-1.12.2_1,1: .......... done
=====
Message from gcc12-12.2.0_5:
--
To ensure binaries built with this toolchain find appropriate versions
of the necessary run-time libraries, you may want to link using
-Wl,-rpath=/usr/local/lib/gcc12
For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
transparently.
===> minc2-2.2.00_12,1 depends on shared library: libhdf5.soSegmentation fault
- not found
*** Error code 1
Stop.
make: stopped in /usr/ports/science/minc2