[package - main-amd64-default][science/cantera] Failed for cantera-2.6.0_3 in build
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Date: Wed, 07 Jun 2023 06:30:48 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: yuri@FreeBSD.org
Log URL: https://pkg-status.freebsd.org/beefy18/data/main-amd64-default/p24b08fa76284_sd66540e829/logs/cantera-2.6.0_3.log
Build URL: https://pkg-status.freebsd.org/beefy18/build.html?mastername=main-amd64-default&build=p24b08fa76284_sd66540e829
Log:
=>> Building science/cantera
build started at Wed Jun 7 06:30:30 UTC 2023
port directory: /usr/ports/science/cantera
package name: cantera-2.6.0_3
building for: FreeBSD main-amd64-default-job-12 14.0-CURRENT FreeBSD 14.0-CURRENT 1400089 amd64
maintained by: yuri@FreeBSD.org
Makefile ident:
Poudriere version: 3.2.8-23-ga7f8d188
Host OSVERSION: 1400073
Jail OSVERSION: 1400089
Job Id: 12
!!! Jail is newer than host. (Jail: 1400089, Host: 1400073) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!
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---Begin OPTIONS List---
===> The following configuration options are available for cantera-2.6.0_3:
OCTAVE=off: Octave support
PYTHON=off: Python bindings or support
===> Use 'make config' to modify these settings
---End OPTIONS List---
--MAINTAINER--
yuri@FreeBSD.org
--End MAINTAINER--
--CONFIGURE_ARGS--
--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/science/cantera/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/cantera/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/cantera/work/.cache HOME=/wrkdirs/usr/ports/science/cantera/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/cantera/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/cantera/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--
--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/science/cantera/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/cantera/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/cantera/work/.cache HOME=/wrkdirs/usr/ports/science/cantera/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/cantera/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/cantera/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="inst
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--SUB_LIST--
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--End SUB_LIST--
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=======================<phase: check-sanity >============================
===> License BSD3CLAUSE accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> cantera-2.6.0_3 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.19.1_1.pkg
[main-amd64-default-job-12] Installing pkg-1.19.1_1...
[main-amd64-default-job-12] Extracting pkg-1.19.1_1: .......... done
===> cantera-2.6.0_3 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of cantera-2.6.0_3
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by cantera-2.6.0_3 for building
===========================================================================
=======================<phase: checksum >============================
===> License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by cantera-2.6.0_3 for building
=> SHA256 Checksum OK for Cantera-cantera-v2.6.0_GH0.tar.gz.
=> SHA256 Checksum OK for LLNL-sundials-887af43_GH0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by cantera-2.6.0_3 for building
===> Extracting for cantera-2.6.0_3
=> SHA256 Checksum OK for Cantera-cantera-v2.6.0_GH0.tar.gz.
=> SHA256 Checksum OK for LLNL-sundials-887af43_GH0.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for cantera-2.6.0_3
===> Applying FreeBSD patches for cantera-2.6.0_3 from /usr/ports/science/cantera/files
===========================================================================
=======================<phase: build-depends >============================
===> cantera-2.6.0_3 depends on package: googletest>0 - not found
===> Installing existing package /packages/All/googletest-1.13.0.pkg
[main-amd64-default-job-12] Installing googletest-1.13.0...
[main-amd64-default-job-12] Extracting googletest-1.13.0: .......... done
===> cantera-2.6.0_3 depends on package: googletest>0 - found
===> Returning to build of cantera-2.6.0_3
===> cantera-2.6.0_3 depends on file: /usr/local/include/boost/algorithm/string.hpp - not found
===> Installing existing package /packages/All/boost-libs-1.82.0_1.pkg
[main-amd64-default-job-12] Installing boost-libs-1.82.0_1...
[main-amd64-default-job-12] `-- Installing icu-73.1,1...
[main-amd64-default-job-12] `-- Extracting icu-73.1,1: .......... done
[main-amd64-default-job-12] Extracting boost-libs-1.82.0_1: .......... done
=====
Message from boost-libs-1.82.0_1:
--
You have built the Boost library with thread support.
Don't forget to add -pthread to your linker options when
linking your code.
===> cantera-2.6.0_3 depends on file: /usr/local/include/boost/algorithm/string.hpp - found
===> Returning to build of cantera-2.6.0_3
===> cantera-2.6.0_3 depends on file: /usr/local/libdata/pkgconfig/eigen3.pc - not found
===> Installing existing package /packages/All/eigen-3.4.0_2.pkg
[main-amd64-default-job-12] Installing eigen-3.4.0_2...
[main-amd64-default-job-12] `-- Installing blas-3.11.0_1...
[main-amd64-default-job-12] | `-- Installing gcc12-12.2.0_6...
[main-amd64-default-job-12] | | `-- Installing binutils-2.40_4,1...
[main-amd64-default-job-12] | | `-- Installing gettext-runtime-0.21.1...
[main-amd64-default-job-12] | | | `-- Installing indexinfo-0.3.1...
[main-amd64-default-job-12] | | | `-- Extracting indexinfo-0.3.1: .... done
[main-amd64-default-job-12] | | `-- Extracting gettext-runtime-0.21.1: .......... done
[main-amd64-default-job-12] | | `-- Installing zstd-1.5.5...
[main-amd64-default-job-12] | | | `-- Installing liblz4-1.9.4,1...
[main-amd64-default-job-12] | | | `-- Extracting liblz4-1.9.4,1: .......... done
[main-amd64-default-job-12] | | `-- Extracting zstd-1.5.5: .......... done
[main-amd64-default-job-12] | | `-- Extracting binutils-2.40_4,1: .......... done
[main-amd64-default-job-12] | | `-- Installing gmp-6.2.1...
[main-amd64-default-job-12] | | `-- Extracting gmp-6.2.1: .......... done
[main-amd64-default-job-12] | | `-- Installing mpc-1.3.1_1...
[main-amd64-default-job-12] | | `-- Installing mpfr-4.2.0_1,1...
[main-amd64-default-job-12] | | `-- Extracting mpfr-4.2.0_1,1: .......... done
[main-amd64-default-job-12] | | `-- Extracting mpc-1.3.1_1: ......... done
[main-amd64-default-job-12] | `-- Extracting gcc12-12.2.0_6: .......... done
[main-amd64-default-job-12] `-- Extracting blas-3.11.0_1: ........ done
[main-amd64-default-job-12] `-- Installing lapack-3.11.0_1...
[main-amd64-default-job-12] `-- Extracting lapack-3.11.0_1: .......... done
[main-amd64-default-job-12] Extracting eigen-3.4.0_2: .......... done
=====
Message from gcc12-12.2.0_6:
--
To ensure binaries built with this toolchain find appropriate versions
of the necessary run-time libraries, you may want to link using
-Wl,-rpath=/usr/local/lib/gcc12
For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
transparently.
===> cantera-2.6.0_3 depends on file: /usr/local/libdata/pkgconfig/eigen3.pc - found
===> Returning to build of cantera-2.6.0_3
===> cantera-2.6.0_3 depends on file: /usr/local/bin/scons-3.9 - not found
===> Installing existing package /packages/All/scons-py39-4.4.0.pkg
[main-amd64-default-job-12] Installing scons-py39-4.4.0...
[main-amd64-default-job-12] `-- Installing py39-setuptools-63.1.0...
[main-amd64-default-job-12] | `-- Installing python39-3.9.16_2...
[main-amd64-default-job-12] | | `-- Installing libffi-3.4.4...
[main-amd64-default-job-12] | | `-- Extracting libffi-3.4.4: .......... done
[main-amd64-default-job-12] | | `-- Installing mpdecimal-2.5.1...
[main-amd64-default-job-12] | | `-- Extracting mpdecimal-2.5.1: .......... done
[main-amd64-default-job-12] | | `-- Installing readline-8.2.1...
[main-amd64-default-job-12] | | `-- Extracting readline-8.2.1: .......... done
[main-amd64-default-job-12] | `-- Extracting python39-3.9.16_2: .......... done
[main-amd64-default-job-12] `-- Extracting py39-setuptools-63.1.0: .......... done
[main-amd64-default-job-12] Extracting scons-py39-4.4.0: .......... done
=====
Message from python39-3.9.16_2:
--
Note that some standard Python modules are provided as separate ports
as they require additional dependencies. They are available as:
py39-gdbm databases/py-gdbm@py39
py39-sqlite3 databases/py-sqlite3@py39
py39-tkinter x11-toolkits/py-tkinter@py39
===> cantera-2.6.0_3 depends on file: /usr/local/bin/scons-3.9 - found
===> Returning to build of cantera-2.6.0_3
===========================================================================
=======================<phase: lib-depends >============================
===> cantera-2.6.0_3 depends on shared library: libfmt.so - not found
===> Installing existing package /packages/All/libfmt-9.1.0.pkg
[main-amd64-default-job-12] Installing libfmt-9.1.0...
[main-amd64-default-job-12] Extracting libfmt-9.1.0: .......... done
===> cantera-2.6.0_3 depends on shared library: libfmt.so - found (/usr/local/lib/libfmt.so)
===> Returning to build of cantera-2.6.0_3
===> cantera-2.6.0_3 depends on shared library: libyaml-cpp.so - not found
===> Installing existing package /packages/All/yaml-cpp-0.7.0.pkg
[main-amd64-default-job-12] Installing yaml-cpp-0.7.0...
[main-amd64-default-job-12] Extracting yaml-cpp-0.7.0: .......... done
===> cantera-2.6.0_3 depends on shared library: libyaml-cpp.so - found (/usr/local/lib/libyaml-cpp.so)
===> Returning to build of cantera-2.6.0_3
===========================================================================
=======================<phase: configure >============================
===> Configuring for cantera-2.6.0_3
===========================================================================
=======================<phase: build >============================
===> Building for cantera-2.6.0_3
scons: Reading SConscript files ...
INFO: SCons 4.4.0 is using the following Python interpreter:
/usr/local/bin/python3.9 (Python 3.9)
INFO: Configuration variables read from 'cantera.conf' and command line:
CXX = 'c++'
cc_flags = '-O2 -pipe -fstack-protector-strong -fno-strict-aliasing '
python_package = 'none'
system_eigen = 'y'
system_fmt = 'y'
system_yamlcpp = 'y'
system_sundials = 'n'
sundials_include = '/usr/local/include/sundials'
googletest = 'system'
debug = False
extra_inc_dirs = '/usr/local/include:/usr/local/include/eigen3'
extra_lib_dirs = '/usr/local/lib'
Checking for C++ header file cmath... yes
Checking for C++ header file fmt/ostream.h... yes
INFO: Using system installation of fmt library.
INFO: Found fmt version 9.1.0
Checking for YAML::Node().Mark()... yes
INFO: Using system installation of yaml-cpp library.
Checking for C++ header file gtest/gtest.h... no
Checking for C++ header file gmock/gmock.h... no
ERROR: Expected system installation of Googletest-1.8.0, but it could not be found.
See 'config.log' for details.
===> Compilation failed unexpectedly.
Try to set MAKE_JOBS_UNSAFE=yes and rebuild before reporting the failure to
the maintainer.
*** Error code 1
Stop.
make: stopped in /usr/ports/science/cantera