From nobody Tue Jul 11 20:28:55 2023 X-Original-To: pkg-fallout@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4R0ssN04XFz2tpsV for ; Tue, 11 Jul 2023 20:28:56 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4R0ssM5bypz3pcH for ; Tue, 11 Jul 2023 20:28:55 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1689107335; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:cc; bh=cEeNsUdPTHGurYSu8WYL74jHaL3B04Yapgk3ZZNFVqg=; b=cg9X2Bct8O+dFAGs+jOGH6vhKYOHCaJ0EtP6MT3URAFTzN7GopfP4djVsHOA6oVd2TX438 SUgLcSdSeZsUcMq7P3WUDkfefHMVCALBjj9hAPcaPGCZRHZhAfA8glrVyF+ey0U0AoTQkp Yzu9KoOxq5D91h8kAaAibjEb+iVMlLSOsECt87NIqEZ54gvBcuoIW6kFD2E10JdKkh+Cde VehGzySL6IVkAVQySi0Va20VeFSKdiz+YhKvtf56fYaXf+m+yCulPvnzpGvCykYCg5X1qh QBMkPJh0s5jKMMHycCji4+4stdT/zeNkZn/0HJilauOwYAsBMGyyNh0AkgVfAA== ARC-Authentication-Results: i=1; mx1.freebsd.org; none ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1689107335; a=rsa-sha256; cv=none; b=X4r0Hsruas9OmrlHANj5xau4Km+XAtqVCgWi3WxDl3lblpQhRAScIWuBcnu/X93KzvXDeS J+YEi9naRXbnJil2/IIeXh2p7JH6PvrpHO9Yuys549HqQt+UQ6IjW4qOpfM36IAO7T+IHB cINGHdLVeUb0N+ntqsu+uuhzdme4cJdg6M9a5IMCQh4oKZrCm1af8mYx+KVFldxdh3xts7 l7RflcbaejcNTQhenOhvzeZeg7/Wc1tpgFbCJaggLv9RBX58nB1gpDJcotwzsmn7IoKEc3 9KE/mZTs+g6a/BEEPdTaIG5g+Dow/FAzGPf/53WPGvgS4S3w8dJHBKR3l2GUUQ== Received: from beefy4.nyi.freebsd.org (beefy4.nyi.freebsd.org [IPv6:2610:1c1:1:6080::16:13]) by mxrelay.nyi.freebsd.org (Postfix) with ESMTP id 4R0ssM4h50zgjN for ; Tue, 11 Jul 2023 20:28:55 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from root (uid 0) (envelope-from pkg-fallout@FreeBSD.org) id bbf by beefy4.nyi.freebsd.org (DragonFly Mail Agent v0.13+ on beefy4.nyi.freebsd.org); Tue, 11 Jul 2023 20:28:55 +0000 To: jwb@FreeBSD.org Subject: [package - 124i386-quarterly][biology/py-dnaio] Failed for py39-dnaio-0.5.1 in build Cc: pkg-fallout@FreeBSD.org Date: Tue, 11 Jul 2023 20:28:55 +0000 Message-Id: <64adbb87.bbf.5d643bac@beefy4.nyi.freebsd.org> From: X-ThisMailContainsUnwantedMimeParts: N List-Id: Fallout logs from package building List-Archive: https://lists.freebsd.org/archives/freebsd-pkg-fallout List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-freebsd-pkg-fallout@freebsd.org You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: jwb@FreeBSD.org Log URL: https://pkg-status.freebsd.org/beefy4/data/124i386-quarterly/6777c48daefc/logs/py39-dnaio-0.5.1.log Build URL: https://pkg-status.freebsd.org/beefy4/build.html?mastername=124i386-quarterly&build=6777c48daefc Log: =>> Building biology/py-dnaio build started at Tue Jul 11 20:28:49 UTC 2023 port directory: /usr/ports/biology/py-dnaio package name: py39-dnaio-0.5.1 building for: FreeBSD 124i386-quarterly-job-09 12.4-RELEASE-p3 FreeBSD 12.4-RELEASE-p3 i386 maintained by: jwb@FreeBSD.org Makefile ident: Poudriere version: 3.2.8-23-ga7f8d188 Host OSVERSION: 1400089 Jail OSVERSION: 1204000 Job Id: 09 ---Begin Environment--- SHELL=/bin/csh UNAME_p=i386 UNAME_m=i386 OSVERSION=1204000 UNAME_v=FreeBSD 12.4-RELEASE-p3 UNAME_r=12.4-RELEASE-p3 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-23-ga7f8d188 MASTERMNT=/usr/local/poudriere/data/.m/124i386-quarterly/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/124i386-quarterly/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=124i386-quarterly SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/124i386-quarterly/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR=py39 DEPENDS_ARGS= MAKE_ARGS= FLAVOR=py39 ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- jwb@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- PYTHON="/usr/local/bin/python3.9" XDG_DATA_HOME=/wrkdirs/usr/ports/biology/py-dnaio/work-py39 XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/py-dnaio/work-py39 XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/py-dnaio/work-py39/.cache HOME=/wrkdirs/usr/ports/biology/py-dnaio/work-py39 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/py-dnaio/work-py39/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/py-dnaio/work-py39/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/biology/py-dnaio/work-py39 XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/py-dnaio/work-py39 XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/py-dnaio/work-py39/.cache HOME=/wrkdirs/usr/ports/biology/py-dnaio/work-py39 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/py-dnaio/work-py39/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/py-dnaio/work-py39/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES LDSHARED="cc -shared" PYTHONDONTWRITEBYTECODE= PYTHONOPTIMIZE= PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PYTHON_INCLUDEDIR=include/python3.9 PYTHON_LIBDIR=lib/python3.9 PYTHON_PLATFORM=freebsd12 PYTHON_SITELIBDIR=lib/python3.9/site-packages PYTHON_SUFFIX=39 PYTHON_EXT_SUFFIX=.cpython-39 PYTHON_VER=3.9 PYTHON_VERSION=python3.9 PYTHON2="@comment " PYTHON3="" OSREL=12.4 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/dnaio" EXAMPLESDIR="share/examples/dnaio" DATADIR="share/dnaio" WWWDIR="www/dnaio" ETCDIR="etc/dnaio" --End PLIST_SUB-- --SUB_LIST-- PYTHON_INCLUDEDIR=/usr/local/include/python3.9 PYTHON_LIBDIR=/usr/local/lib/python3.9 PYTHON_PLATFORM=freebsd12 PYTHON_SITELIBDIR=/usr/local/lib/python3.9/site-packages PYTHON_SUFFIX=39 PYTHON_EXT_SUFFIX=.cpython-39 PYTHON_VER=3.9 PYTHON_VERSION=python3.9 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/dnaio DOCSDIR=/usr/local/share/doc/dnaio EXAMPLESDIR=/usr/local/share/examples/dnaio WWWDIR=/usr/local/www/dnaio ETCDIR=/usr/local/etc/dnaio --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes MACHINE=i386 MACHINE_ARCH=i386 ARCH=${MACHINE_ARCH} #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_921dbbb2=FreeBSD clang version 13.0.0 (git@github.com:llvm/llvm-project.git llvmorg-13.0.0-0-gd7b669b3a303) Target: i386-unknown-freebsd12.4 Thread model: posix InstalledDir: /usr/bin _ALTCCVERSION_921dbbb2=none _CXXINTERNAL_acaad9ca=FreeBSD clang version 13.0.0 (git@github.com:llvm/llvm-project.git llvmorg-13.0.0-0-gd7b669b3a303) Target: i386-unknown-freebsd12.4 Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-m" "elf_i386_fbsd" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_921dbbb2_58173849=yes CC_OUTPUT_921dbbb2_9bdba57c=yes CC_OUTPUT_921dbbb2_6a4fe7f5=yes CC_OUTPUT_921dbbb2_6bcac02b=yes CC_OUTPUT_921dbbb2_67d20829=yes CC_OUTPUT_921dbbb2_bfa62e83=yes CC_OUTPUT_921dbbb2_f0b4d593=yes CC_OUTPUT_921dbbb2_308abb44=yes CC_OUTPUT_921dbbb2_f00456e5=yes CC_OUTPUT_921dbbb2_65ad290d=yes CC_OUTPUT_921dbbb2_f2776b26=yes CC_OUTPUT_921dbbb2_53255a77=yes CC_OUTPUT_921dbbb2_911cfe02=yes CC_OUTPUT_921dbbb2_b2657cc3=yes CC_OUTPUT_921dbbb2_380987f7=yes CC_OUTPUT_921dbbb2_160933ec=yes CC_OUTPUT_921dbbb2_fb62803b=yes CC_OUTPUT_921dbbb2_af59ad06=yes CC_OUTPUT_921dbbb2_a15f3fcf=yes _OBJC_CCVERSION_921dbbb2=FreeBSD clang version 13.0.0 (git@github.com:llvm/llvm-project.git llvmorg-13.0.0-0-gd7b669b3a303) Target: i386-unknown-freebsd12.4 Thread model: posix InstalledDir: /usr/bin _OBJC_ALTCCVERSION_921dbbb2=none ARCH=i386 OPSYS=FreeBSD _OSRELEASE=12.4-RELEASE-p3 OSREL=12.4 OSVERSION=1204000 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=524288 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 524288 stack size (kbytes, -s) 65536 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =================================================== ===> License MIT accepted by the user =========================================================================== =================================================== ===> py39-dnaio-0.5.1 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.19.2.pkg [124i386-quarterly-job-09] Installing pkg-1.19.2... [124i386-quarterly-job-09] Extracting pkg-1.19.2: .......... done ===> py39-dnaio-0.5.1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of py39-dnaio-0.5.1 =========================================================================== =================================================== =========================================================================== =================================================== ===> License MIT accepted by the user ===> Fetching all distfiles required by py39-dnaio-0.5.1 for building =========================================================================== =================================================== ===> License MIT accepted by the user ===> Fetching all distfiles required by py39-dnaio-0.5.1 for building => SHA256 Checksum OK for dnaio-0.5.1.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> License MIT accepted by the user ===> Fetching all distfiles required by py39-dnaio-0.5.1 for building ===> Extracting for py39-dnaio-0.5.1 => SHA256 Checksum OK for dnaio-0.5.1.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Patching for py39-dnaio-0.5.1 =========================================================================== =================================================== ===> py39-dnaio-0.5.1 depends on package: py39-setuptools_scm>0 - not found ===> Installing existing package /packages/All/py39-setuptools_scm-6.4.2.pkg [124i386-quarterly-job-09] Installing py39-setuptools_scm-6.4.2... [124i386-quarterly-job-09] `-- Installing py39-packaging-23.1... [124i386-quarterly-job-09] | `-- Installing python39-3.9.17... [124i386-quarterly-job-09] | | `-- Installing gettext-runtime-0.21.1... [124i386-quarterly-job-09] | | `-- Installing indexinfo-0.3.1... [124i386-quarterly-job-09] | | `-- Extracting indexinfo-0.3.1: .... done [124i386-quarterly-job-09] | | `-- Extracting gettext-runtime-0.21.1: .......... done [124i386-quarterly-job-09] | | `-- Installing libffi-3.4.4... [124i386-quarterly-job-09] | | `-- Extracting libffi-3.4.4: .......... done [124i386-quarterly-job-09] | | `-- Installing mpdecimal-2.5.1... [124i386-quarterly-job-09] | | `-- Extracting mpdecimal-2.5.1: .......... done [124i386-quarterly-job-09] | | `-- Installing readline-8.2.1... [124i386-quarterly-job-09] | | `-- Extracting readline-8.2.1: .......... done [124i386-quarterly-job-09] | `-- Extracting python39-3.9.17: .......... done [124i386-quarterly-job-09] `-- Extracting py39-packaging-23.1: .......... done [124i386-quarterly-job-09] `-- Installing py39-setuptools-63.1.0_1... [124i386-quarterly-job-09] `-- Extracting py39-setuptools-63.1.0_1: .......... done [124i386-quarterly-job-09] `-- Installing py39-tomli-2.0.1_2... [124i386-quarterly-job-09] `-- Extracting py39-tomli-2.0.1_2: .......... done [124i386-quarterly-job-09] Extracting py39-setuptools_scm-6.4.2: .......... done ===== Message from python39-3.9.17: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py39-gdbm databases/py-gdbm@py39 py39-sqlite3 databases/py-sqlite3@py39 py39-tkinter x11-toolkits/py-tkinter@py39 ===> py39-dnaio-0.5.1 depends on package: py39-setuptools_scm>0 - found ===> Returning to build of py39-dnaio-0.5.1 ===> py39-dnaio-0.5.1 depends on package: py39-setuptools>=63.1.0 - found ===> py39-dnaio-0.5.1 depends on file: /usr/local/bin/python3.9 - found =========================================================================== =================================================== =========================================================================== =================================================== ===> Configuring for py39-dnaio-0.5.1 running config =========================================================================== =================================================== ===> Building for py39-dnaio-0.5.1 running build running build_py creating build creating build/lib.freebsd-12.4-RELEASE-p3-i386-cpython-39 creating build/lib.freebsd-12.4-RELEASE-p3-i386-cpython-39/dnaio copying src/dnaio/_util.py -> build/lib.freebsd-12.4-RELEASE-p3-i386-cpython-39/dnaio copying src/dnaio/__init__.py -> build/lib.freebsd-12.4-RELEASE-p3-i386-cpython-39/dnaio copying src/dnaio/writers.py -> build/lib.freebsd-12.4-RELEASE-p3-i386-cpython-39/dnaio copying src/dnaio/readers.py -> build/lib.freebsd-12.4-RELEASE-p3-i386-cpython-39/dnaio copying src/dnaio/chunks.py -> build/lib.freebsd-12.4-RELEASE-p3-i386-cpython-39/dnaio copying src/dnaio/exceptions.py -> build/lib.freebsd-12.4-RELEASE-p3-i386-cpython-39/dnaio copying src/dnaio/_version.py -> build/lib.freebsd-12.4-RELEASE-p3-i386-cpython-39/dnaio copying src/dnaio/py.typed -> build/lib.freebsd-12.4-RELEASE-p3-i386-cpython-39/dnaio copying src/dnaio/_version.pyi -> build/lib.freebsd-12.4-RELEASE-p3-i386-cpython-39/dnaio copying src/dnaio/_core.pyi -> build/lib.freebsd-12.4-RELEASE-p3-i386-cpython-39/dnaio running build_ext building 'dnaio._core' extension creating build/temp.freebsd-12.4-RELEASE-p3-i386-cpython-39 creating build/temp.freebsd-12.4-RELEASE-p3-i386-cpython-39/src creating build/temp.freebsd-12.4-RELEASE-p3-i386-cpython-39/src/dnaio cc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -I/usr/local/include/python3.9 -c src/dnaio/_core.c -o build/temp.freebsd-12.4-RELEASE-p3-i386-cpython-39/src/dnaio/_core.o error: command '/usr/bin/cc' failed with exit code -11 *** Error code 1 Stop. make: stopped in /usr/ports/biology/py-dnaio