[package - main-armv7-default][science/nest] Failed for nest-3.3_2 in build
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Date: Fri, 07 Jul 2023 06:16:42 UTC
You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: yuri@FreeBSD.org Log URL: https://pkg-status.freebsd.org/ampere2/data/main-armv7-default/p7520ea4fbadd_sfd774e065c/logs/nest-3.3_2.log Build URL: https://pkg-status.freebsd.org/ampere2/build.html?mastername=main-armv7-default&build=p7520ea4fbadd_sfd774e065c Log: =>> Building science/nest build started at Fri Jul 7 06:03:00 UTC 2023 port directory: /usr/ports/science/nest package name: nest-3.3_2 building for: FreeBSD main-armv7-default-job-06 14.0-CURRENT FreeBSD 14.0-CURRENT 1400092 arm maintained by: yuri@FreeBSD.org Makefile ident: Poudriere version: 3.2.8-23-ga7f8d188 Host OSVERSION: 1400089 Jail OSVERSION: 1400092 Job Id: 06 !!! Jail is newer than host. (Jail: 1400092, Host: 1400089) !!! !!! This is not supported. !!! !!! Host kernel must be same or newer than jail. !!! !!! Expect build failures. !!! ---Begin Environment--- SHELL=/bin/sh OSVERSION=1400092 UNAME_v=FreeBSD 14.0-CURRENT 1400092 UNAME_r=14.0-CURRENT BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-23-ga7f8d188 MASTERMNT=/usr/local/poudriere/data/.m/main-armv7-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/main-armv7-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=main-armv7-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/main-armv7-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for nest-3.3_2: DOCS=on: Build and/or install documentation PYTHON=on: Python bindings or support ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- PKG_CONFIG=pkgconf PYTHON="/usr/local/bin/python3.9" XDG_DATA_HOME=/wrkdirs/usr/ports/science/nest/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/nest/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/nest/work/.cache HOME=/wrkdirs/usr/ports/science/nest/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/nest/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/nest/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- NINJA_STATUS="[%p %s/%t] " 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PACKAGE_BUILDING_FLAVORS=yes #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. 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[main-armv7-default-job-06] Extracting pkg-1.19.1_3: .......... done ===> nest-3.3_2 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of nest-3.3_2 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by nest-3.3_2 for building =========================================================================== =======================<phase: checksum >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by nest-3.3_2 for building => SHA256 Checksum OK for nest-nest-simulator-v3.3_GH0.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by nest-3.3_2 for building ===> Extracting for nest-3.3_2 => SHA256 Checksum OK for nest-nest-simulator-v3.3_GH0.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for nest-3.3_2 ===> Applying FreeBSD patches for nest-3.3_2 from /usr/ports/science/nest/files =========================================================================== =======================<phase: build-depends >============================ ===> nest-3.3_2 depends on file: /usr/local/bin/cmake - not found <snip> -------------------------------------------------------------------------------- Build type : Release Target System : FreeBSD Cross Compiling : FALSE C compiler : GNU 12.2.0 (/usr/local/bin/gcc12) C compiler flags : -O2 -pipe -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc12 -fno-strict-aliasing -O2 -Wall -fopenmp -fdiagnostics-color=auto -O2 -pipe -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc12 -fno-strict-aliasing -DNDEBUG C++ compiler : GNU 12.2.0 (/usr/local/bin/g++12) C++ compiler flags : -O2 -pipe -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc12 -stdlib=libc++ -Wl,-rpath=/usr/local/lib/gcc12 -O2 -std=c++11 -Wall -fopenmp -fdiagnostics-color=auto -O2 -pipe -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc12 -stdlib=libc++ -Wl,-rpath=/usr/local/lib/gcc12 -DNDEBUG Build dynamic : ON Built-in modules : models User modules : None Python bindings : Yes (Python 3.9.17: /usr/local/bin/python3.9) Includes : /usr/local/include/python3.9/ Libraries : Cython bindings : Yes (Cython 0.29.35: /usr/local/bin/cython-3.9) MPI4PY header : NO Use threading : Yes (OpenMP: -fopenmp) Use GSL : Yes (GSL 2.7.1) Includes : /usr/local/include Libraries : /usr/local/lib/libgsl.so;/usr/local/lib/libgslcblas.so Use Readline : Yes (GNU Readline 8.2) Includes : /usr/local/include Libraries : /usr/local/lib/libreadline.so;/usr/lib/libncurses.so Use libltdl : Yes (LTDL ) Includes : /usr/local/include Libraries : /usr/local/lib/libltdl.so Use doxygen : No Use MPI : No Detailed timers : No Use MUSIC : No Use libneurosim : No Use Boost : Yes (Boost 1.82.0) Includes : /usr/local/include Libraries : Use SIONlib : No -------------------------------------------------------------------------------- The NEST executable will be installed to: /usr/local/bin/ NEST dynamic libraries and user modules will be installed to: /usr/local/lib/nest/ Documentation and examples will be installed to: /usr/local/share/doc/nest/ PyNEST will be installed to: /usr/local/lib/python3.9/site-packages To set necessary environment variables, add the following line to your ~/.bashrc : source /usr/local/bin/nest_vars.sh -------------------------------------------------------------------------------- You can now build and install NEST with make make install make installcheck If you experience problems with the installation or the use of NEST, please see https://www.nest-simulator.org/frequently_asked_questions or go to https://www.nest-simulator.org/community to find out how to join the user mailing list. -- Configuring done (45.1s) -- Generating done (0.2s) CMake Warning: Manually-specified variables were not used by the project: BOOST_PYTHON_SUFFIX CMAKE_COLOR_MAKEFILE CMAKE_VERBOSE_MAKEFILE FETCHCONTENT_FULLY_DISCONNECTED Python_ADDITIONAL_VERSIONS THREADS_HAVE_PTHREAD_ARG -- Build files have been written to: /wrkdirs/usr/ports/science/nest/work/.build =========================================================================== 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-fopenmp -MD -MT models/CMakeFiles/models.dir/modelsmodule.cpp.o -MF models/CMakeFiles/models.dir/modelsmodule.cpp.o.d -o models/CMakeFiles/models.dir/modelsmodule.cpp.o -c /wrkdirs/usr/ports/science/nest/work/nest-simulator-3.3/models/modelsmodule.cpp FAILED: models/CMakeFiles/models.dir/modelsmodule.cpp.o /usr/local/bin/g++12 -Dmodels_EXPORTS -I/wrkdirs/usr/ports/science/nest/work/nest-simulator-3.3/thirdparty -I/wrkdirs/usr/ports/science/nest/work/nest-simulator-3.3/libnestutil -I/wrkdirs/usr/ports/science/nest/work/.build/libnestutil -I/wrkdirs/usr/ports/science/nest/work/nest-simulator-3.3/sli -I/wrkdirs/usr/ports/science/nest/work/nest-simulator-3.3/nestkernel -O2 -pipe -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc12 -stdlib=libc++ -Wl,-rpath=/usr/local/lib/gcc12 -O2 -std=c++11 -Wall -fopenmp -fdiagnostics-color=auto -O2 -pipe -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc12 -stdlib=libc++ -Wl,-rpath=/usr/local/lib/gcc12 -DNDEBUG -fPIC -fopenmp -MD -MT models/CMakeFiles/models.dir/modelsmodule.cpp.o -MF models/CMakeFiles/models.dir/modelsmodule.cpp.o.d -o models/CMakeFiles/models.dir/modelsmodule.cpp.o -c /wrkdirs/usr/ports/science/nest/work/nest-simulator-3.3/models/modelsmodule.cpp virtual memory exhausted: Cannot allocate memory [ 40% 94/232] /usr/local/bin/g++12 -Dmodels_EXPORTS -I/wrkdirs/usr/ports/science/nest/work/nest-simulator-3.3/thirdparty -I/wrkdirs/usr/ports/science/nest/work/nest-simulator-3.3/libnestutil -I/wrkdirs/usr/ports/science/nest/work/.build/libnestutil -I/wrkdirs/usr/ports/science/nest/work/nest-simulator-3.3/sli -I/wrkdirs/usr/ports/science/nest/work/nest-simulator-3.3/nestkernel -O2 -pipe -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc12 -stdlib=libc++ -Wl,-rpath=/usr/local/lib/gcc12 -O2 -std=c++11 -Wall -fopenmp -fdiagnostics-color=auto -O2 -pipe -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc12 -stdlib=libc++ -Wl,-rpath=/usr/local/lib/gcc12 -DNDEBUG -fPIC -fopenmp -MD -MT models/CMakeFiles/models.dir/step_current_generator.cpp.o -MF models/CMakeFiles/models.dir/step_current_generator.cpp.o.d -o models/CMakeFiles/models.dir/step_current_generator.cpp.o -c /wrkdirs/usr/ports/science/nest/work/nest-simulator-3.3/models/step_current_generator.cpp ninja: build stopped: subcommand failed. ===> Compilation failed unexpectedly. Try to set MAKE_JOBS_UNSAFE=yes and rebuild before reporting the failure to the maintainer. *** Error code 1 Stop. make: stopped in /usr/ports/science/nest