[package - 131releng-armv7-default][biology/jalview] Failed for jalview-2.11.2.5 in build
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Date: Sat, 28 Jan 2023 19:11:21 UTC
You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: yuri@FreeBSD.org Log URL: https://pkg-status.freebsd.org/ampere3/data/131releng-armv7-default/08587f681899/logs/jalview-2.11.2.5.log Build URL: https://pkg-status.freebsd.org/ampere3/build.html?mastername=131releng-armv7-default&build=08587f681899 Log: =>> Building biology/jalview build started at Sat Jan 28 19:08:43 UTC 2023 port directory: /usr/ports/biology/jalview package name: jalview-2.11.2.5 building for: FreeBSD 131releng-armv7-default-job-12 13.1-RELEASE-p5 FreeBSD 13.1-RELEASE-p5 1301000 arm maintained by: yuri@FreeBSD.org Makefile ident: Poudriere version: 3.2.8-23-ga7f8d188 Host OSVERSION: 1400073 Jail OSVERSION: 1301000 Job Id: 12 ---Begin Environment--- SHELL=/bin/csh OSVERSION=1301000 UNAME_v=FreeBSD 13.1-RELEASE-p5 1301000 UNAME_r=13.1-RELEASE-p5 BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-23-ga7f8d188 MASTERMNT=/usr/local/poudriere/data/.m/131releng-armv7-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/131releng-armv7-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=131releng-armv7-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/131releng-armv7-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/biology/jalview/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/jalview/work XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/jalview/work/.cache HOME=/wrkdirs/usr/ports/biology/jalview/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/jalview/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/jalview/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh LANG=en_US.UTF-8 LC_ALL=en_US.UTF-8 --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/biology/jalview/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/jalview/work XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/jalview/work/.cache HOME=/wrkdirs/usr/ports/biology/jalview/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/jalview/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/jalview/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES LANG=en_US.UTF-8 LC_ALL=en_US.UTF-8 PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="inst all -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- JAVASHAREDIR="share/java" JAVAJARDIR="share/java/classes" OSREL=13.1 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/jalview" EXAMPLESDIR="share/examples/jalview" DATADIR="share/java/jalview" WWWDIR="www/jalview" ETCDIR="etc/jalview" --End PLIST_SUB-- --SUB_LIST-- JAVA=/usr/local/openjdk11/bin/java JAVASHAREDIR="/usr/local/share/java" JAVAJARDIR="/usr/local/share/java/classes" JAVALIBDIR="/usr/local/share/java/classes" JAVA_VERSION="11" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/java/jalview DOCSDIR=/usr/local/share/doc/jalview EXAMPLESDIR=/usr/local/share/examples/jalview WWWDIR=/usr/local/www/jalview ETCDIR=/usr/local/etc/jalview --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_921dbbb2=FreeBSD clang version 13.0.0 (git@github.com:llvm/llvm-project.git llvmorg-13.0.0-0-gd7b669b3a303) Target: armv7-unknown-freebsd13.1-gnueabihf Thread model: posix InstalledDir: /usr/bin _ALTCCVERSION_921dbbb2=none _CXXINTERNAL_acaad9ca=FreeBSD clang version 13.0.0 (git@github.com:llvm/llvm-project.git llvmorg-13.0.0-0-gd7b669b3a303) Target: armv7-unknown-freebsd13.1-gnueabihf Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_921dbbb2_58173849=yes CC_OUTPUT_921dbbb2_9bdba57c=yes CC_OUTPUT_921dbbb2_6a4fe7f5=yes CC_OUTPUT_921dbbb2_6bcac02b=yes CC_OUTPUT_921dbbb2_67d20829=yes CC_OUTPUT_921dbbb2_bfa62e83=yes CC_OUTPUT_921dbbb2_f0b4d593=yes CC_OUTPUT_921dbbb2_308abb44=yes CC_OUTPUT_921dbbb2_f00456e5=yes CC_OUTPUT_921dbbb2_65ad290d=yes CC_OUTPUT_921dbbb2_f2776b26=yes CC_OUTPUT_921dbbb2_53255a77=yes CC_OUTPUT_921dbbb2_911cfe02=yes CC_OUTPUT_921dbbb2_b2657cc3=yes CC_OUTPUT_921dbbb2_380987f7=yes CC_OUTPUT_921dbbb2_160933ec=yes CC_OUTPUT_921dbbb2_fb62803b=yes CC_OUTPUT_921dbbb2_af59ad06=yes CC_OUTPUT_921dbbb2_a15f3fcf=yes _OBJC_CCVERSION_921dbbb2=FreeBSD clang version 13.0.0 (git@github.com:llvm/llvm-project.git llvmorg-13.0.0-0-gd7b669b3a303) Target: armv7-unknown-freebsd13.1-gnueabihf Thread model: posix InstalledDir: /usr/bin _OBJC_ALTCCVERSION_921dbbb2=none ARCH=armv7 OPSYS=FreeBSD _OSRELEASE=13.1-RELEASE-p5 OSREL=13.1 OSVERSION=1301000 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=524288 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 1048576 stack size (kbytes, -s) 1048576 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License GPLv3 accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> jalview-2.11.2.5 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.19.0.pkg [131releng-armv7-default-job-12] Installing pkg-1.19.0... [131releng-armv7-default-job-12] Extracting pkg-1.19.0: .......... done ===> jalview-2.11.2.5 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of jalview-2.11.2.5 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License GPLv3 accepted by the user ===> Fetching all distfiles required by jalview-2.11.2.5 for building =========================================================================== =======================<phase: checksum >============================ ===> License GPLv3 accepted by the user ===> Fetching all distfiles required by jalview-2.11.2.5 for building => SHA256 Checksum OK for jalview_2_11_2_5.tar.gz. => SHA256 Checksum OK for jalview-2.11.2.5-deps.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License GPLv3 accepted by the user ===> Fetching all distfiles required by jalview-2.11.2.5 for building ===> Extracting for jalview-2.11.2.5 => SHA256 Checksum OK for jalview_2_11_2_5.tar.gz. => SHA256 Checksum OK for jalview-2.11.2.5-deps.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for jalview-2.11.2.5 =========================================================================== =======================<phase: build-depends >============================ ===> jalview-2.11.2.5 depends on executable: gradle - not found ===> Installing existing package /packages/All/gradle-7.6.pkg [131releng-armv7-default-job-12] Installing gradle-7.6... [131releng-armv7-default-job-12] `-- Installing openjdk8-8.362.09.1... [131releng-armv7-default-job-12] | `-- Installing alsa-lib-1.2.2_1... [131releng-armv7-default-job-12] | `-- Extracting alsa-lib-1.2.2_1: .......... done [131releng-armv7-default-job-12] | `-- Installing dejavu-2.37_1... [131releng-armv7-default-job-12] | | `-- Installing fontconfig-2.14.0,1... [131releng-armv7-default-job-12] | | `-- Installing expat-2.5.0... [131releng-armv7-default-job-12] | | `-- Extracting expat-2.5.0: .......... done [131releng-armv7-default-job-12] | | `-- Installing freetype2-2.12.1_2... [131releng-armv7-default-job-12] | | | `-- Installing brotli-1.0.9,1... [131releng-armv7-default-job-12] | | | `-- Extracting brotli-1.0.9,1: .......... done [131releng-armv7-default-job-12] | | | `-- Installing png-1.6.39... <snip> at jdk.compiler/com.sun.tools.javac.parser.JavacParser.classDeclaration(JavacParser.java:3494) at jdk.compiler/com.sun.tools.javac.parser.JavacParser.classOrInterfaceOrEnumDeclaration(JavacParser.java:3448) at jdk.compiler/com.sun.tools.javac.parser.JavacParser.typeDeclaration(JavacParser.java:3437) at jdk.compiler/com.sun.tools.javac.parser.JavacParser.parseCompilationUnit(JavacParser.java:3281) at jdk.compiler/com.sun.tools.javac.main.JavaCompiler.parse(JavaCompiler.java:639) at jdk.compiler/com.sun.tools.javac.main.JavaCompiler.parse(JavaCompiler.java:676) at jdk.compiler/com.sun.tools.javac.main.JavaCompiler.parseFiles(JavaCompiler.java:1026) at jdk.compiler/com.sun.tools.javac.main.JavaCompiler.compile(JavaCompiler.java:939) at jdk.compiler/com.sun.tools.javac.api.JavacTaskImpl.lambda$doCall$0(JavacTaskImpl.java:104) at jdk.compiler/com.sun.tools.javac.api.JavacTaskImpl.handleExceptions(JavacTaskImpl.java:147) at jdk.compiler/com.sun.tools.javac.api.JavacTaskImpl.doCall(JavacTaskImpl.java:100) at jdk.compiler/com.sun.tools.javac.api.JavacTaskImpl.call(JavacTaskImpl.java:94) at org.gradle.internal.compiler.java.IncrementalCompileTask.call(IncrementalCompileTask.java:89) at org.gradle.api.internal.tasks.compile.AnnotationProcessingCompileTask.call(AnnotationProcessingCompileTask.java:94) at org.gradle.api.internal.tasks.compile.ResourceCleaningCompilationTask.call(ResourceCleaningCompilationTask.java:57) at org.gradle.api.internal.tasks.compile.JdkJavaCompiler.execute(JdkJavaCompiler.java:54) at org.gradle.api.internal.tasks.compile.JdkJavaCompiler.execute(JdkJavaCompiler.java:39) at org.gradle.api.internal.tasks.compile.NormalizingJavaCompiler.delegateAndHandleErrors(NormalizingJavaCompiler.java:98) at org.gradle.api.internal.tasks.compile.NormalizingJavaCompiler.execute(NormalizingJavaCompiler.java:52) at org.gradle.api.internal.tasks.compile.NormalizingJavaCompiler.execute(NormalizingJavaCompiler.java:38) at org.gradle.api.internal.tasks.compile.AnnotationProcessorDiscoveringCompiler.execute(AnnotationProcessorDiscoveringCompiler.java:51) at org.gradle.api.internal.tasks.compile.AnnotationProcessorDiscoveringCompiler.execute(AnnotationProcessorDiscoveringCompiler.java:37) at org.gradle.api.internal.tasks.compile.ModuleApplicationNameWritingCompiler.execute(ModuleApplicationNameWritingCompiler.java:46) at org.gradle.api.internal.tasks.compile.ModuleApplicationNameWritingCompiler.execute(ModuleApplicationNameWritingCompiler.java:36) at org.gradle.jvm.toolchain.internal.DefaultToolchainJavaCompiler.execute(DefaultToolchainJavaCompiler.java:57) at org.gradle.api.tasks.compile.JavaCompile.lambda$createToolchainCompiler$1(JavaCompile.java:237) at org.gradle.api.internal.tasks.compile.CleaningJavaCompiler.execute(CleaningJavaCompiler.java:53) at org.gradle.api.internal.tasks.compile.incremental.IncrementalCompilerFactory.lambda$createRebuildAllCompiler$0(IncrementalCompilerFactory.java:52) at org.gradle.api.internal.tasks.compile.incremental.SelectiveCompiler.execute(SelectiveCompiler.java:70) at org.gradle.api.internal.tasks.compile.incremental.SelectiveCompiler.execute(SelectiveCompiler.java:44) at org.gradle.api.internal.tasks.compile.incremental.IncrementalResultStoringCompiler.execute(IncrementalResultStoringCompiler.java:66) at org.gradle.api.internal.tasks.compile.incremental.IncrementalResultStoringCompiler.execute(IncrementalResultStoringCompiler.java:52) at org.gradle.api.internal.tasks.compile.CompileJavaBuildOperationReportingCompiler$2.call(CompileJavaBuildOperationReportingCompiler.java:59) at org.gradle.api.internal.tasks.compile.CompileJavaBuildOperationReportingCompiler$2.call(CompileJavaBuildOperationReportingCompiler.java:51) at org.gradle.internal.operations.DefaultBuildOperationRunner$CallableBuildOperationWorker.execute(DefaultBuildOperationRunner.java:204) at org.gradle.internal.operations.DefaultBuildOperationRunner$CallableBuildOperationWorker.execute(DefaultBuildOperationRunner.java:199) at org.gradle.internal.operations.DefaultBuildOperationRunner$2.execute(DefaultBuildOperationRunner.java:66) at org.gradle.internal.operations.DefaultBuildOperationRunner$2.execute(DefaultBuildOperationRunner.java:59) at org.gradle.internal.operations.DefaultBuildOperationRunner.execute(DefaultBuildOperationRunner.java:157) at org.gradle.internal.operations.DefaultBuildOperationRunner.execute(DefaultBuildOperationRunner.java:59) at org.gradle.internal.operations.DefaultBuildOperationRunner.call(DefaultBuildOperationRunner.java:53) at org.gradle.internal.operations.DefaultBuildOperationExecutor.call(DefaultBuildOperationExecutor.java:73) at org.gradle.api.internal.tasks.compile.CompileJavaBuildOperationReportingCompiler.execute(CompileJavaBuildOperationReportingCompiler.java:51) at org.gradle.api.tasks.compile.JavaCompile.performCompilation(JavaCompile.java:288) at org.gradle.api.tasks.compile.JavaCompile.performIncrementalCompilation(JavaCompile.java:170) at org.gradle.api.tasks.compile.JavaCompile.compile(JavaCompile.java:148) at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.base/java.lang.reflect.Method.invoke(Method.java:566) at org.gradle.internal.reflect.JavaMethod.invoke(JavaMethod.java:125) at org.gradle.api.internal.project.taskfactory.IncrementalInputsTaskAction.doExecute(IncrementalInputsTaskAction.java:32) at org.gradle.api.internal.project.taskfactory.StandardTaskAction.execute(StandardTaskAction.java:51) at org.gradle.api.internal.project.taskfactory.AbstractIncrementalTaskAction.execute(AbstractIncrementalTaskAction.java:25) at org.gradle.api.internal.project.taskfactory.StandardTaskAction.execute(StandardTaskAction.java:29) at org.gradle.api.internal.tasks.execution.TaskExecution$3.run(TaskExecution.java:236) at org.gradle.internal.operations.DefaultBuildOperationRunner$1.execute(DefaultBuildOperationRunner.java:29) at org.gradle.internal.operations.DefaultBuildOperationRunner$1.execute(DefaultBuildOperationRunner.java:26) at org.gradle.internal.operations.DefaultBuildOperationRunner$2.execute(DefaultBuildOperationRunner.java:66) at org.gradle.internal.operations.DefaultBuildOperationRunner$2.execute(DefaultBuildOperationRunner.java:59) at org.gradle.internal.operations.DefaultBuildOperationRunner.execute(DefaultBuildOperationRunner.java:157) at org.gradle.internal.operations.DefaultBuildOperationRunner.execute(DefaultBuildOperationRunner.java:59) at org.gradle.internal.operations.DefaultBuildOperationRunner.run(DefaultBuildOperationRunner.java:47) at org.gradle.internal.operations.DefaultBuildOperationExecutor.run(DefaultBuildOperationExecutor.java:68) at org.gradle.api.internal.tasks.execution.TaskExecution.executeAction(TaskExecution.java:221) at org.gradle.api.internal.tasks.execution.TaskExecution.executeActions(TaskExecution.java:204) at org.gradle.api.internal.tasks.execution.TaskExecution.executeWithPreviousOutputFiles(TaskExecution.java:187) at org.gradle.api.internal.tasks.execution.TaskExecution.execute(TaskExecution.java:165) at org.gradle.internal.execution.steps.ExecuteStep.executeInternal(ExecuteStep.java:89) at org.gradle.internal.execution.steps.ExecuteStep.access$000(ExecuteStep.java:40) at org.gradle.internal.execution.steps.ExecuteStep$1.call(ExecuteStep.java:53) at org.gradle.internal.execution.steps.ExecuteStep$1.call(ExecuteStep.java:50) at org.gradle.internal.operations.DefaultBuildOperationRunner$CallableBuildOperationWorker.execute(DefaultBuildOperationRunner.java:204) at org.gradle.internal.operations.DefaultBuildOperationRunner$CallableBuildOperationWorker.execute(DefaultBuildOperationRunner.java:199) at org.gradle.internal.operations.DefaultBuildOperationRunner$2.execute(DefaultBuildOperationRunner.java:66) at org.gradle.internal.operations.DefaultBuildOperationRunner$2.execute(DefaultBuildOperationRunner.java:59) at org.gradle.internal.operations.DefaultBuildOperationRunner.execute(DefaultBuildOperationRunner.java:157) at org.gradle.internal.operations.DefaultBuildOperationRunner.execute(DefaultBuildOperationRunner.java:59) at org.gradle.internal.operations.DefaultBuildOperationRunner.call(DefaultBuildOperationRunner.java:53) at org.gradle.internal.operations.DefaultBuildOperationExecutor.call(DefaultBuildOperationExecutor.java:73) at org.gradle.internal.execution.steps.ExecuteStep.execute(ExecuteStep.java:50) at org.gradle.internal.execution.steps.ExecuteStep.execute(ExecuteStep.java:40) at org.gradle.internal.execution.steps.RemovePreviousOutputsStep.execute(RemovePreviousOutputsStep.java:68) at org.gradle.internal.execution.steps.RemovePreviousOutputsStep.execute(RemovePreviousOutputsStep.java:38) at org.gradle.internal.execution.steps.CancelExecutionStep.execute(CancelExecutionStep.java:41) at org.gradle.internal.execution.steps.TimeoutStep.executeWithoutTimeout(TimeoutStep.java:74) at org.gradle.internal.execution.steps.TimeoutStep.execute(TimeoutStep.java:55) at org.gradle.internal.execution.steps.CreateOutputsStep.execute(CreateOutputsStep.java:51) at org.gradle.internal.execution.steps.CreateOutputsStep.execute(CreateOutputsStep.java:29) at org.gradle.internal.execution.steps.CaptureStateAfterExecutionStep.executeDelegateBroadcastingChanges(CaptureStateAfterExecutionStep.java:124) at org.gradle.internal.execution.steps.CaptureStateAfterExecutionStep.execute(CaptureStateAfterExecutionStep.java:80) at org.gradle.internal.execution.steps.CaptureStateAfterExecutionStep.execute(CaptureStateAfterExecutionStep.java:58) at org.gradle.internal.execution.steps.ResolveInputChangesStep.execute(ResolveInputChangesStep.java:48) at org.gradle.internal.execution.steps.ResolveInputChangesStep.execute(ResolveInputChangesStep.java:36) at org.gradle.internal.execution.steps.BuildCacheStep.executeWithoutCache(BuildCacheStep.java:181) at org.gradle.internal.execution.steps.BuildCacheStep.lambda$execute$1(BuildCacheStep.java:71) at org.gradle.internal.Either$Right.fold(Either.java:175) at org.gradle.internal.execution.caching.CachingState.fold(CachingState.java:59) at org.gradle.internal.execution.steps.BuildCacheStep.execute(BuildCacheStep.java:69) at org.gradle.internal.execution.steps.BuildCacheStep.execute(BuildCacheStep.java:47) at org.gradle.internal.execution.steps.StoreExecutionStateStep.execute(StoreExecutionStateStep.java:36) at org.gradle.internal.execution.steps.StoreExecutionStateStep.execute(StoreExecutionStateStep.java:25) at org.gradle.internal.execution.steps.RecordOutputsStep.execute(RecordOutputsStep.java:36) at org.gradle.internal.execution.steps.RecordOutputsStep.execute(RecordOutputsStep.java:22) at org.gradle.internal.execution.steps.SkipUpToDateStep.executeBecause(SkipUpToDateStep.java:110) at org.gradle.internal.execution.steps.SkipUpToDateStep.lambda$execute$2(SkipUpToDateStep.java:56) at java.base/java.util.Optional.orElseGet(Optional.java:369) at org.gradle.internal.execution.steps.SkipUpToDateStep.execute(SkipUpToDateStep.java:56) at org.gradle.internal.execution.steps.SkipUpToDateStep.execute(SkipUpToDateStep.java:38) at org.gradle.internal.execution.steps.ResolveChangesStep.execute(ResolveChangesStep.java:73) at org.gradle.internal.execution.steps.ResolveChangesStep.execute(ResolveChangesStep.java:44) at org.gradle.internal.execution.steps.legacy.MarkSnapshottingInputsFinishedStep.execute(MarkSnapshottingInputsFinishedStep.java:37) at org.gradle.internal.execution.steps.legacy.MarkSnapshottingInputsFinishedStep.execute(MarkSnapshottingInputsFinishedStep.java:27) at org.gradle.internal.execution.steps.ResolveCachingStateStep.execute(ResolveCachingStateStep.java:89) at org.gradle.internal.execution.steps.ResolveCachingStateStep.execute(ResolveCachingStateStep.java:50) at org.gradle.internal.execution.steps.ValidateStep.execute(ValidateStep.java:102) at org.gradle.internal.execution.steps.ValidateStep.execute(ValidateStep.java:57) at org.gradle.internal.execution.steps.CaptureStateBeforeExecutionStep.execute(CaptureStateBeforeExecutionStep.java:76) at org.gradle.internal.execution.steps.CaptureStateBeforeExecutionStep.execute(CaptureStateBeforeExecutionStep.java:50) at org.gradle.internal.execution.steps.SkipEmptyWorkStep.executeWithNoEmptySources(SkipEmptyWorkStep.java:254) at org.gradle.internal.execution.steps.SkipEmptyWorkStep.executeWithNoEmptySources(SkipEmptyWorkStep.java:209) at org.gradle.internal.execution.steps.SkipEmptyWorkStep.execute(SkipEmptyWorkStep.java:88) at org.gradle.internal.execution.steps.SkipEmptyWorkStep.execute(SkipEmptyWorkStep.java:56) at org.gradle.internal.execution.steps.RemoveUntrackedExecutionStateStep.execute(RemoveUntrackedExecutionStateStep.java:32) at org.gradle.internal.execution.steps.RemoveUntrackedExecutionStateStep.execute(RemoveUntrackedExecutionStateStep.java:21) at org.gradle.internal.execution.steps.legacy.MarkSnapshottingInputsStartedStep.execute(MarkSnapshottingInputsStartedStep.java:38) at org.gradle.internal.execution.steps.LoadPreviousExecutionStateStep.execute(LoadPreviousExecutionStateStep.java:43) at org.gradle.internal.execution.steps.LoadPreviousExecutionStateStep.execute(LoadPreviousExecutionStateStep.java:31) at org.gradle.internal.execution.steps.AssignWorkspaceStep.lambda$execute$0(AssignWorkspaceStep.java:40) at org.gradle.api.internal.tasks.execution.TaskExecution$4.withWorkspace(TaskExecution.java:281) at org.gradle.internal.execution.steps.AssignWorkspaceStep.execute(AssignWorkspaceStep.java:40) at org.gradle.internal.execution.steps.AssignWorkspaceStep.execute(AssignWorkspaceStep.java:30) at org.gradle.internal.execution.steps.IdentityCacheStep.execute(IdentityCacheStep.java:37) at org.gradle.internal.execution.steps.IdentityCacheStep.execute(IdentityCacheStep.java:27) at org.gradle.internal.execution.steps.IdentifyStep.execute(IdentifyStep.java:44) at org.gradle.internal.execution.steps.IdentifyStep.execute(IdentifyStep.java:33) at org.gradle.internal.execution.impl.DefaultExecutionEngine$1.execute(DefaultExecutionEngine.java:76) at org.gradle.api.internal.tasks.execution.ExecuteActionsTaskExecuter.executeIfValid(ExecuteActionsTaskExecuter.java:139) at org.gradle.api.internal.tasks.execution.ExecuteActionsTaskExecuter.execute(ExecuteActionsTaskExecuter.java:128) at org.gradle.api.internal.tasks.execution.CleanupStaleOutputsExecuter.execute(CleanupStaleOutputsExecuter.java:77) at org.gradle.api.internal.tasks.execution.FinalizePropertiesTaskExecuter.execute(FinalizePropertiesTaskExecuter.java:46) at org.gradle.api.internal.tasks.execution.ResolveTaskExecutionModeExecuter.execute(ResolveTaskExecutionModeExecuter.java:51) at org.gradle.api.internal.tasks.execution.SkipTaskWithNoActionsExecuter.execute(SkipTaskWithNoActionsExecuter.java:57) at org.gradle.api.internal.tasks.execution.SkipOnlyIfTaskExecuter.execute(SkipOnlyIfTaskExecuter.java:57) at org.gradle.api.internal.tasks.execution.CatchExceptionTaskExecuter.execute(CatchExceptionTaskExecuter.java:36) at org.gradle.api.internal.tasks.execution.EventFiringTaskExecuter$1.executeTask(EventFiringTaskExecuter.java:77) at org.gradle.api.internal.tasks.execution.EventFiringTaskExecuter$1.call(EventFiringTaskExecuter.java:55) at org.gradle.api.internal.tasks.execution.EventFiringTaskExecuter$1.call(EventFiringTaskExecuter.java:52) at org.gradle.internal.operations.DefaultBuildOperationRunner$CallableBuildOperationWorker.execute(DefaultBuildOperationRunner.java:204) at org.gradle.internal.operations.DefaultBuildOperationRunner$CallableBuildOperationWorker.execute(DefaultBuildOperationRunner.java:199) at org.gradle.internal.operations.DefaultBuildOperationRunner$2.execute(DefaultBuildOperationRunner.java:66) at org.gradle.internal.operations.DefaultBuildOperationRunner$2.execute(DefaultBuildOperationRunner.java:59) at org.gradle.internal.operations.DefaultBuildOperationRunner.execute(DefaultBuildOperationRunner.java:157) at org.gradle.internal.operations.DefaultBuildOperationRunner.execute(DefaultBuildOperationRunner.java:59) at org.gradle.internal.operations.DefaultBuildOperationRunner.call(DefaultBuildOperationRunner.java:53) at org.gradle.internal.operations.DefaultBuildOperationExecutor.call(DefaultBuildOperationExecutor.java:73) at org.gradle.api.internal.tasks.execution.EventFiringTaskExecuter.execute(EventFiringTaskExecuter.java:52) at org.gradle.execution.plan.LocalTaskNodeExecutor.execute(LocalTaskNodeExecutor.java:69) at org.gradle.execution.taskgraph.DefaultTaskExecutionGraph$InvokeNodeExecutorsAction.execute(DefaultTaskExecutionGraph.java:322) at org.gradle.execution.taskgraph.DefaultTaskExecutionGraph$InvokeNodeExecutorsAction.execute(DefaultTaskExecutionGraph.java:309) at org.gradle.execution.taskgraph.DefaultTaskExecutionGraph$BuildOperationAwareExecutionAction.execute(DefaultTaskExecutionGraph.java:302) at org.gradle.execution.taskgraph.DefaultTaskExecutionGraph$BuildOperationAwareExecutionAction.execute(DefaultTaskExecutionGraph.java:288) at org.gradle.execution.plan.DefaultPlanExecutor$ExecutorWorker.execute(DefaultPlanExecutor.java:462) at org.gradle.execution.plan.DefaultPlanExecutor$ExecutorWorker.run(DefaultPlanExecutor.java:379) at org.gradle.internal.concurrent.ExecutorPolicy$CatchAndRecordFailures.onExecute(ExecutorPolicy.java:64) at org.gradle.internal.concurrent.ManagedExecutorImpl$1.run(ManagedExecutorImpl.java:49) at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128) at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628) at java.base/java.lang.Thread.run(Thread.java:829) > Task :compileJava FAILED FAILURE: Build failed with an exception. * What went wrong: Execution failed for task ':compileJava'. > Compilation failed; see the compiler error output for details. * Try: > Run with --stacktrace option to get the stack trace. > Run with --info or --debug option to get more log output. > Run with --scan to get full insights. * Get more help at https://help.gradle.org Deprecated Gradle features were used in this build, making it incompatible with Gradle 8.0. You can use '--warning-mode all' to show the individual deprecation warnings and determine if they come from your own scripts or plugins. See https://docs.gradle.org/7.6/userguide/command_line_interface.html#sec:command_line_warnings Execution optimizations have been disabled for 2 invalid unit(s) of work during this build to ensure correctness. Please consult deprecation warnings for more details. BUILD FAILED in 1m 42s 9 actionable tasks: 9 executed *** Error code 1 Stop. make: stopped in /usr/ports/biology/jalview