[package - main-amd64-default][math/spooles-mpich] Failed for spooles-mpich-2.2_15 in build
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Date: Mon, 20 Feb 2023 01:23:22 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: ports@FreeBSD.org
Log URL: https://pkg-status.freebsd.org/beefy18/data/main-amd64-default/p9d6358b286b5_sff8da9b2ba/logs/spooles-mpich-2.2_15.log
Build URL: https://pkg-status.freebsd.org/beefy18/build.html?mastername=main-amd64-default&build=p9d6358b286b5_sff8da9b2ba
Log:
=>> Building math/spooles-mpich
build started at Mon Feb 20 01:23:13 UTC 2023
port directory: /usr/ports/math/spooles-mpich
package name: spooles-mpich-2.2_15
building for: FreeBSD main-amd64-default-job-01 14.0-CURRENT FreeBSD 14.0-CURRENT 1400081 amd64
maintained by: ports@FreeBSD.org
Makefile ident:
Poudriere version: 3.2.8-23-ga7f8d188
Host OSVERSION: 1400073
Jail OSVERSION: 1400081
Job Id: 01
!!! Jail is newer than host. (Jail: 1400081, Host: 1400073) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!
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SHELL=/bin/sh
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UNAME_v=FreeBSD 14.0-CURRENT 1400081
UNAME_r=14.0-CURRENT
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P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
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PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---
---Begin OPTIONS List---
===> The following configuration options are available for spooles-mpich-2.2_15:
DOCS=on: Build and/or install documentation
===> Use 'make config' to modify these settings
---End OPTIONS List---
--MAINTAINER--
ports@FreeBSD.org
--End MAINTAINER--
--CONFIGURE_ARGS--
--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/math/spooles-mpich/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/spooles-mpich/work XDG_CACHE_HOME=/wrkdirs/usr/ports/math/spooles-mpich/work/.cache HOME=/wrkdirs/usr/ports/math/spooles-mpich/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/math/spooles-mpich/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/math/spooles-mpich/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--
--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/math/spooles-mpich/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/spooles-mpich/work XDG_CACHE_HOME=/wrkdirs/usr/ports/math/spooles-mpich/work/.cache HOME=/wrkdirs/usr/ports/math/spooles-mpich/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/math/spooles-mpich/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/math/spooles-mpich/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_
INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444"
--End MAKE_ENV--
--PLIST_SUB--
MPI="" MT="@comment " PORTDOCS="" OSREL=14.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/spooles" EXAMPLESDIR="share/examples/spooles" DATADIR="share/spooles" WWWDIR="www/spooles" ETCDIR="etc/spooles"
--End PLIST_SUB--
--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/spooles DOCSDIR=/usr/local/share/doc/spooles EXAMPLESDIR=/usr/local/share/examples/spooles WWWDIR=/usr/local/www/spooles ETCDIR=/usr/local/etc/spooles
--End SUB_LIST--
---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
#### /usr/local/etc/poudriere.d/make.conf ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure. It currently retries the same
# failed mirror and then fails rather then trying another. It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
#### /usr/ports/Mk/Scripts/ports_env.sh ####
_CCVERSION_921dbbb2=FreeBSD clang version 15.0.7 (https://github.com/llvm/llvm-project.git llvmorg-15.0.7-0-g8dfdcc7b7bf6) Target: x86_64-unknown-freebsd14.0 Thread model: posix InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 15.0.7 (https://github.com/llvm/llvm-project.git llvmorg-15.0.7-0-g8dfdcc7b7bf6) Target: x86_64-unknown-freebsd14.0 Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o"
CC_OUTPUT_921dbbb2_58173849=yes
CC_OUTPUT_921dbbb2_9bdba57c=yes
CC_OUTPUT_921dbbb2_6a4fe7f5=yes
CC_OUTPUT_921dbbb2_6bcac02b=yes
CC_OUTPUT_921dbbb2_67d20829=yes
CC_OUTPUT_921dbbb2_bfa62e83=yes
CC_OUTPUT_921dbbb2_f0b4d593=yes
CC_OUTPUT_921dbbb2_308abb44=yes
CC_OUTPUT_921dbbb2_f00456e5=yes
CC_OUTPUT_921dbbb2_65ad290d=yes
CC_OUTPUT_921dbbb2_f2776b26=yes
CC_OUTPUT_921dbbb2_53255a77=yes
CC_OUTPUT_921dbbb2_911cfe02=yes
CC_OUTPUT_921dbbb2_b2657cc3=yes
CC_OUTPUT_921dbbb2_380987f7=yes
CC_OUTPUT_921dbbb2_160933ec=yes
CC_OUTPUT_921dbbb2_fb62803b=yes
CC_OUTPUT_921dbbb2_af59ad06=yes
CC_OUTPUT_921dbbb2_a15f3fcf=yes
_OBJC_CCVERSION_921dbbb2=FreeBSD clang version 15.0.7 (https://github.com/llvm/llvm-project.git llvmorg-15.0.7-0-g8dfdcc7b7bf6) Target: x86_64-unknown-freebsd14.0 Thread model: posix InstalledDir: /usr/bin
_OBJC_ALTCCVERSION_921dbbb2=none
ARCH=amd64
OPSYS=FreeBSD
_OSRELEASE=14.0-CURRENT
OSREL=14.0
OSVERSION=1400081
PYTHONBASE=/usr/local
HAVE_COMPAT_IA32_KERN=YES
CONFIGURE_MAX_CMD_LEN=524288
HAVE_PORTS_ENV=1
#### Misc Poudriere ####
GID=0
UID=0
---End make.conf---
--Resource limits--
cpu time (seconds, -t) unlimited
file size (512-blocks, -f) unlimited
data seg size (kbytes, -d) 33554432
stack size (kbytes, -s) 524288
core file size (512-blocks, -c) unlimited
max memory size (kbytes, -m) unlimited
locked memory (kbytes, -l) unlimited
max user processes (-u) 89999
open files (-n) 1024
virtual mem size (kbytes, -v) unlimited
swap limit (kbytes, -w) unlimited
socket buffer size (bytes, -b) unlimited
pseudo-terminals (-p) unlimited
kqueues (-k) unlimited
umtx shared locks (-o) unlimited
--End resource limits--
=======================<phase: check-sanity >============================
===> NOTICE:
The spooles port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:
https://bugs.freebsd.org/bugzilla
More information about port maintainership is available at:
https://docs.freebsd.org/en/articles/contributing/#ports-contributing
===> License PD accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> spooles-mpich-2.2_15 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.19.1_1.pkg
[main-amd64-default-job-01] Installing pkg-1.19.1_1...
[main-amd64-default-job-01] Extracting pkg-1.19.1_1: .......... done
===> spooles-mpich-2.2_15 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of spooles-mpich-2.2_15
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> NOTICE:
The spooles port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:
https://bugs.freebsd.org/bugzilla
More information about port maintainership is available at:
https://docs.freebsd.org/en/articles/contributing/#ports-contributing
===> License PD accepted by the user
===> Fetching all distfiles required by spooles-mpich-2.2_15 for building
===========================================================================
=======================<phase: checksum >============================
===> NOTICE:
The spooles port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:
https://bugs.freebsd.org/bugzilla
More information about port maintainership is available at:
https://docs.freebsd.org/en/articles/contributing/#ports-contributing
===> License PD accepted by the user
===> Fetching all distfiles required by spooles-mpich-2.2_15 for building
=> SHA256 Checksum OK for spooles/spooles.2.2.tgz.
=> SHA256 Checksum OK for spooles/AllInOne.ps.gz.
=> SHA256 Checksum OK for spooles/Eigen.ps.gz.
=> SHA256 Checksum OK for spooles/Install.ps.gz.
=> SHA256 Checksum OK for spooles/LinSol.ps.gz.
=> SHA256 Checksum OK for spooles/Ordering.ps.gz.
=> SHA256 Checksum OK for spooles/PP99.ps.gz.
=> SHA256 Checksum OK for spooles/ReferenceManual.ps.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> NOTICE:
The spooles port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:
https://bugs.freebsd.org/bugzilla
More information about port maintainership is available at:
https://docs.freebsd.org/en/articles/contributing/#ports-contributing
===> License PD accepted by the user
===> Fetching all distfiles required by spooles-mpich-2.2_15 for building
===> Extracting for spooles-mpich-2.2_15
=> SHA256 Checksum OK for spooles/spooles.2.2.tgz.
=> SHA256 Checksum OK for spooles/AllInOne.ps.gz.
=> SHA256 Checksum OK for spooles/Eigen.ps.gz.
=> SHA256 Checksum OK for spooles/Install.ps.gz.
=> SHA256 Checksum OK for spooles/LinSol.ps.gz.
=> SHA256 Checksum OK for spooles/Ordering.ps.gz.
=> SHA256 Checksum OK for spooles/PP99.ps.gz.
=> SHA256 Checksum OK for spooles/ReferenceManual.ps.gz.
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for spooles-mpich-2.2_15
===> Applying FreeBSD patches for spooles-mpich-2.2_15 from /usr/ports/math/spooles-mpich/../spooles/files
===========================================================================
=======================<phase: build-depends >============================
===> spooles-mpich-2.2_15 depends on package: gmake>=4.3 - not found
===> Installing existing package /packages/All/gmake-4.3_2.pkg
[main-amd64-default-job-01] Installing gmake-4.3_2...
[main-amd64-default-job-01] `-- Installing gettext-runtime-0.21.1...
[main-amd64-default-job-01] | `-- Installing indexinfo-0.3.1...
[main-amd64-default-job-01] | `-- Extracting indexinfo-0.3.1: .... done
[main-amd64-default-job-01] `-- Extracting gettext-runtime-0.21.1: .......... done
[main-amd64-default-job-01] Extracting gmake-4.3_2: .......... done
===> spooles-mpich-2.2_15 depends on package: gmake>=4.3 - found
===> Returning to build of spooles-mpich-2.2_15
===========================================================================
=======================<phase: lib-depends >============================
===> spooles-mpich-2.2_15 depends on shared library: libmpich.so - not found
===> Installing existing package /packages/All/mpich-3.4.3_1.pkg
[main-amd64-default-job-01] Installing mpich-3.4.3_1...
[main-amd64-default-job-01] `-- Installing bash-5.2.15...
[main-amd64-default-job-01] | `-- Installing readline-8.2.0...
[main-amd64-default-job-01] | `-- Extracting readline-8.2.0: .......... done
[main-amd64-default-job-01] `-- Extracting bash-5.2.15: .......... done
[main-amd64-default-job-01] `-- Installing gcc12-12.2.0_5...
[main-amd64-default-job-01] | `-- Installing binutils-2.39,1...
[main-amd64-default-job-01] | `-- Extracting binutils-2.39,1: .......... done
[main-amd64-default-job-01] | `-- Installing gmp-6.2.1...
[main-amd64-default-job-01] | `-- Extracting gmp-6.2.1: .......... done
[main-amd64-default-job-01] | `-- Installing mpc-1.2.1...
[main-amd64-default-job-01] | | `-- Installing mpfr-4.2.0,1...
[main-amd64-default-job-01] | | `-- Extracting mpfr-4.2.0,1: .......... done
[main-amd64-default-job-01] | `-- Extracting mpc-1.2.1: ......... done
[main-amd64-default-job-01] `-- Extracting gcc12-12.2.0_5: .......... done
[main-amd64-default-job-01] `-- Installing hwloc2-2.8.0...
[main-amd64-default-job-01] | `-- Installing level-zero-1.9.4...
[main-amd64-default-job-01] | `-- Extracting level-zero-1.9.4: .......... done
[main-amd64-default-job-01] | `-- Installing libpciaccess-0.16...
[main-amd64-default-job-01] | | `-- Installing pciids-20230126...
[main-amd64-default-job-01] | | `-- Extracting pciids-20230126: ..... done
[main-amd64-default-job-01] | `-- Extracting libpciaccess-0.16: ......... done
[main-amd64-default-job-01] | `-- Installing libxml2-2.10.3_1...
[main-amd64-default-job-01] | `-- Extracting libxml2-2.10.3_1: .......... done
[main-amd64-default-job-01] `-- Extracting hwloc2-2.8.0: .......... done
[main-amd64-default-job-01] `-- Installing json-c-0.16...
[main-amd64-default-job-01] `-- Extracting json-c-0.16: .......... done
[main-amd64-default-job-01] `-- Installing libepoll-shim-0.0.20220703...
[main-amd64-default-job-01] `-- Extracting libepoll-shim-0.0.20220703: .......... done
[main-amd64-default-job-01] `-- Installing libfabric-1.15.1...
[main-amd64-default-job-01] `-- Extracting libfabric-1.15.1: .......... done
[main-amd64-default-job-01] `-- Installing perl5-5.32.1_3...
[main-amd64-default-job-01] `-- Extracting perl5-5.32.1_3: .......... done
[main-amd64-default-job-01] `-- Installing slurm-wlm-20.02.7_2...
[main-amd64-default-job-01] | `-- Installing hdf5-1.12.2_1,1...
[main-amd64-default-job-01] | | `-- Installing libaec-1.0.6...
[main-amd64-default-job-01] | | `-- Extracting libaec-1.0.6: .......... done
[main-amd64-default-job-01] | `-- Extracting hdf5-1.12.2_1,1: .......... done
[main-amd64-default-job-01] | `-- Installing liblz4-1.9.4,1...
[main-amd64-default-job-01] | `-- Extracting liblz4-1.9.4,1: .......... done
[main-amd64-default-job-01] | `-- Installing libsysinfo-0.0.3_2...
[main-amd64-default-job-01] | `-- Extracting libsysinfo-0.0.3_2: ......... done
[main-amd64-default-job-01] | `-- Installing lua54-5.4.4...
[main-amd64-default-job-01] | | `-- Installing libedit-3.1.20221030,1...
[main-amd64-default-job-01] | | `-- Extracting libedit-3.1.20221030,1: .......... done
[main-amd64-default-job-01] | `-- Extracting lua54-5.4.4: .......... done
[main-amd64-default-job-01] | `-- Installing munge-0.5.14_1...
[main-amd64-default-job-01] | `-- Extracting munge-0.5.14_1: ......... done
===> Creating groups.
Creating group 'slurm' with gid '468'.
===> Creating users
Creating user 'slurm' with uid '468'.
[main-amd64-default-job-01] `-- Extracting slurm-wlm-20.02.7_2: .......... done
[main-amd64-default-job-01] Extracting mpich-3.4.3_1: .......... done
=====
Message from gcc12-12.2.0_5:
--
To ensure binaries built with this toolchain find appropriate versions
of the necessary run-time libraries, you may want to link using
-Wl,-rpath=/usr/local/lib/gcc12
For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
transparently.
=====
Message from slurm-wlm-20.02.7_2:
--
===> NOTICE:
The slurm-wlm port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:
https://bugs.freebsd.org/bugzilla
More information about port maintainership is available at:
https://docs.freebsd.org/en/articles/contributing/#ports-contributing
=====
Message from mpich-3.4.3_1:
--
===> NOTICE:
The mpich port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:
https://bugs.freebsd.org/bugzilla
More information about port maintainership is available at:
https://docs.freebsd.org/en/articles/contributing/#ports-contributing
===> spooles-mpich-2.2_15 depends on shared library: libmpich.so - found (/usr/local/lib/libmpich.so)
===> Returning to build of spooles-mpich-2.2_15
===========================================================================
=======================<phase: configure >============================
===> Configuring for spooles-mpich-2.2_15
===========================================================================
=======================<phase: build >============================
===> Building for spooles-mpich-2.2_15
gmake[1]: Entering directory '/wrkdirs/usr/ports/math/spooles-mpich/work/spooles.2.2/MPI/src'
cc -c -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I/usr/local/include aggListMPI.c -o MPI_aggListMPI.o
aggListMPI.c:40:55: warning: format specifies type 'void *' but the argument has type 'MPI_Comm' (aka 'int') [-Wformat]
"\n bad input\n", frontmtx, frontOwnersIV, comm) ;
^~~~
1 warning generated.
cc -c -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I/usr/local/include colmapMPI.c -o MPI_colmapMPI.o
cc -c -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I/usr/local/include DenseMtx_gather.c -o MPI_DenseMtx_gather.o
cc -c -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I/usr/local/include DenseMtx_scatterAdd.c -o MPI_DenseMtx_scatterAdd.o
cc -c -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I/usr/local/include ETree_Bcast.c -o MPI_ETree_Bcast.o
cc -c -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I/usr/local/include factorMPI.c -o MPI_factorMPI.o
factorMPI.c:668:14: error: incompatible pointer to integer conversion assigning to 'MPI_Request' (aka 'int') from 'void *' [-Wint-conversion]
msg->req = NULL ;
^ ~~~~
1 error generated.
gmake[1]: *** [makeGlobalLib:35: factorMPI.o] Error 1
gmake[1]: Leaving directory '/wrkdirs/usr/ports/math/spooles-mpich/work/spooles.2.2/MPI/src'
*** Error code 2
Stop.
make: stopped in /usr/ports/math/spooles-mpich