[package - 124i386-quarterly][science/tfel-edf] Failed for tfel-mfront-edf-3.2.1.1_4 in configure
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Date: Tue, 22 Aug 2023 09:56:48 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: thierry@FreeBSD.org
Log URL: https://pkg-status.freebsd.org/beefy4/data/124i386-quarterly/f3d8c4bf5c40/logs/tfel-mfront-edf-3.2.1.1_4.log
Build URL: https://pkg-status.freebsd.org/beefy4/build.html?mastername=124i386-quarterly&build=f3d8c4bf5c40
Log:
=>> Building science/tfel-edf
build started at Tue Aug 22 09:55:40 UTC 2023
port directory: /usr/ports/science/tfel-edf
package name: tfel-mfront-edf-3.2.1.1_4
building for: FreeBSD 124i386-quarterly-job-01 12.4-RELEASE-p4 FreeBSD 12.4-RELEASE-p4 i386
maintained by: thierry@FreeBSD.org
Makefile ident:
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===> The following configuration options are available for tfel-mfront-edf-3.2.1.1_4:
DOCS=on: Build and/or install documentation
===> Use 'make config' to modify these settings
---End OPTIONS List---
--MAINTAINER--
thierry@FreeBSD.org
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--End MAKE_ENV--
--PLIST_SUB--
PORTDOCS="" DOCS="" NO_DOCS="@comment " CMAKE_BUILD_TYPE="release" PYTHON_INCLUDEDIR=include/python3.9 PYTHON_LIBDIR=lib/python3.9 PYTHON_PLATFORM=freebsd12 PYTHON_SITELIBDIR=lib/python3.9/site-packages PYTHON_SUFFIX=39 PYTHON_EXT_SUFFIX=.cpython-39 PYTHON_VER=3.9 PYTHON_VERSION=python3.9 PYTHON2="@comment " PYTHON3="" OSREL=12.4 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/tfel" EXAMPLESDIR="share/examples/tfel" DATADIR="share/tfel" WWWDIR="www/tfel" ETCDIR="etc/tfel"
--End PLIST_SUB--
--SUB_LIST--
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--End resource limits--
=======================<phase: check-sanity >============================
===> License GPLv3 accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> tfel-mfront-edf-3.2.1.1_4 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.19.2.pkg
[124i386-quarterly-job-01] Installing pkg-1.19.2...
[124i386-quarterly-job-01] Extracting pkg-1.19.2: .......... done
===> tfel-mfront-edf-3.2.1.1_4 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of tfel-mfront-edf-3.2.1.1_4
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License GPLv3 accepted by the user
=> aster-full-src-14.6.0-1.noarch.tar.gz doesn't seem to exist in /portdistfiles/.
=> Attempting to fetch http://www.code-aster.org/FICHIERS/aster-full-src-14.6.0-1.noarch.tar.gz
aster-full-src-14.6.0-1.noarch.tar.gz 258 MB 40 MBps 06s
===> Fetching all distfiles required by tfel-mfront-edf-3.2.1.1_4 for building
===========================================================================
=======================<phase: checksum >============================
===> License GPLv3 accepted by the user
===> Fetching all distfiles required by tfel-mfront-edf-3.2.1.1_4 for building
=> SHA256 Checksum OK for aster-full-src-14.6.0-1.noarch.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> License GPLv3 accepted by the user
===> Fetching all distfiles required by tfel-mfront-edf-3.2.1.1_4 for building
===> Extracting for tfel-mfront-edf-3.2.1.1_4
=> SHA256 Checksum OK for aster-full-src-14.6.0-1.noarch.tar.gz.
(cd /wrkdirs/usr/ports/science/tfel-edf/work && /usr/bin/tar -xf /wrkdirs/usr/ports/science/tfel-edf/work/aster-full-src-14.6.0/SRC/tfel-3.2.1-1.tar.gz --no-same-owner --no-same-permissions)
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for tfel-mfront-edf-3.2.1.1_4
===> Applying FreeBSD patches for tfel-mfront-edf-3.2.1.1_4 from /usr/ports/science/tfel-edf/files
===========================================================================
=======================<phase: build-depends >============================
===> tfel-mfront-edf-3.2.1.1_4 depends on executable: gnuplot - not found
===> Installing existing package /packages/All/gnuplot-5.4.1_2.pkg
[124i386-quarterly-job-01] Installing gnuplot-5.4.1_2...
[124i386-quarterly-job-01] `-- Installing at-spi2-core-2.48.0...
[124i386-quarterly-job-01] | `-- Installing dbus-1.14.6,1...
<snip>
with the SMB option. To use it, you must install a
port that provides NTLM, like net/samba412 or net/samba413.
===> tfel-mfront-edf-3.2.1.1_4 depends on executable: gnuplot - found
===> Returning to build of tfel-mfront-edf-3.2.1.1_4
===> tfel-mfront-edf-3.2.1.1_4 depends on package: py39-numpy>=1.16,1<1.25,1 - not found
===> Installing existing package /packages/All/py39-numpy-1.24.1_4,1.pkg
[124i386-quarterly-job-01] Installing py39-numpy-1.24.1_4,1...
[124i386-quarterly-job-01] `-- Installing gcc12-12.2.0_6...
[124i386-quarterly-job-01] | `-- Installing binutils-2.40_4,1...
[124i386-quarterly-job-01] | `-- Extracting binutils-2.40_4,1: .......... done
[124i386-quarterly-job-01] | `-- Installing mpc-1.3.1_1...
[124i386-quarterly-job-01] | | `-- Installing mpfr-4.2.0_1,1...
[124i386-quarterly-job-01] | | `-- Extracting mpfr-4.2.0_1,1: .......... done
[124i386-quarterly-job-01] | `-- Extracting mpc-1.3.1_1: ......... done
[124i386-quarterly-job-01] `-- Extracting gcc12-12.2.0_6: .......... done
[124i386-quarterly-job-01] `-- Installing openblas-0.3.20_1,1...
[124i386-quarterly-job-01] `-- Extracting openblas-0.3.20_1,1: .......... done
[124i386-quarterly-job-01] `-- Installing py39-setuptools-63.1.0_1...
[124i386-quarterly-job-01] `-- Extracting py39-setuptools-63.1.0_1: .......... done
[124i386-quarterly-job-01] `-- Installing suitesparse-umfpack-6.1.0_1...
[124i386-quarterly-job-01] | `-- Installing metis-5.1.0_9...
[124i386-quarterly-job-01] | `-- Extracting metis-5.1.0_9: .......... done
[124i386-quarterly-job-01] | `-- Installing suitesparse-amd-3.0.3_1...
[124i386-quarterly-job-01] | | `-- Installing suitesparse-config-7.0.1_1...
[124i386-quarterly-job-01] | | `-- Extracting suitesparse-config-7.0.1_1: .......... done
[124i386-quarterly-job-01] | `-- Extracting suitesparse-amd-3.0.3_1: .......... done
[124i386-quarterly-job-01] | `-- Installing suitesparse-camd-3.0.3_1...
[124i386-quarterly-job-01] | `-- Extracting suitesparse-camd-3.0.3_1: .......... done
[124i386-quarterly-job-01] | `-- Installing suitesparse-ccolamd-3.0.3_1...
[124i386-quarterly-job-01] | `-- Extracting suitesparse-ccolamd-3.0.3_1: .......... done
[124i386-quarterly-job-01] | `-- Installing suitesparse-cholmod-4.0.3_1...
[124i386-quarterly-job-01] | | `-- Installing suitesparse-colamd-3.0.3_1...
[124i386-quarterly-job-01] | | `-- Extracting suitesparse-colamd-3.0.3_1: .......... done
[124i386-quarterly-job-01] | `-- Extracting suitesparse-cholmod-4.0.3_1: .......... done
[124i386-quarterly-job-01] `-- Extracting suitesparse-umfpack-6.1.0_1: .......... done
[124i386-quarterly-job-01] Extracting py39-numpy-1.24.1_4,1: .......... done
=====
Message from gcc12-12.2.0_6:
--
To ensure binaries built with this toolchain find appropriate versions
of the necessary run-time libraries, you may want to link using
-Wl,-rpath=/usr/local/lib/gcc12
For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
transparently.
=====
Message from metis-5.1.0_9:
--
===> NOTICE:
The metis port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:
https://bugs.freebsd.org/bugzilla
More information about port maintainership is available at:
https://docs.freebsd.org/en/articles/contributing/#ports-contributing
===> tfel-mfront-edf-3.2.1.1_4 depends on package: py39-numpy>=1.16,1<1.25,1 - found
===> Returning to build of tfel-mfront-edf-3.2.1.1_4
===> tfel-mfront-edf-3.2.1.1_4 depends on file: /usr/local/bin/cmake - not found
===> Installing existing package /packages/All/cmake-core-3.26.1_1.pkg
[124i386-quarterly-job-01] Installing cmake-core-3.26.1_1...
[124i386-quarterly-job-01] `-- Installing jsoncpp-1.9.5...
[124i386-quarterly-job-01] `-- Extracting jsoncpp-1.9.5: .......... done
[124i386-quarterly-job-01] `-- Installing libuv-1.46.0...
[124i386-quarterly-job-01] `-- Extracting libuv-1.46.0: .......... done
[124i386-quarterly-job-01] `-- Installing rhash-1.4.3...
[124i386-quarterly-job-01] `-- Extracting rhash-1.4.3: .......... done
[124i386-quarterly-job-01] Extracting cmake-core-3.26.1_1: .......... done
===> tfel-mfront-edf-3.2.1.1_4 depends on file: /usr/local/bin/cmake - found
===> Returning to build of tfel-mfront-edf-3.2.1.1_4
===> tfel-mfront-edf-3.2.1.1_4 depends on executable: gfortran12 - found
===> tfel-mfront-edf-3.2.1.1_4 depends on file: /usr/local/bin/python3.9 - found
===> tfel-mfront-edf-3.2.1.1_4 depends on file: /usr/local/bin/as - found
===========================================================================
=======================<phase: lib-depends >============================
===> tfel-mfront-edf-3.2.1.1_4 depends on shared library: libboost_python39.so - not found
===> Installing existing package /packages/All/py39-boost-libs-1.82.0.pkg
[124i386-quarterly-job-01] Installing py39-boost-libs-1.82.0...
[124i386-quarterly-job-01] `-- Installing boost-libs-1.82.0_1...
[124i386-quarterly-job-01] `-- Extracting boost-libs-1.82.0_1: .......... done
[124i386-quarterly-job-01] Extracting py39-boost-libs-1.82.0: .......... done
=====
Message from boost-libs-1.82.0_1:
--
You have built the Boost library with thread support.
Don't forget to add -pthread to your linker options when
linking your code.
=====
Message from py39-boost-libs-1.82.0:
--
You have built the Boost library with thread support.
Don't forget to add -pthread to your linker options when
linking your code.
===> tfel-mfront-edf-3.2.1.1_4 depends on shared library: libboost_python39.so - found (/usr/local/lib/libboost_python39.so)
===> Returning to build of tfel-mfront-edf-3.2.1.1_4
===> tfel-mfront-edf-3.2.1.1_4 depends on shared library: libboost_thread.so - found (/usr/local/lib/libboost_thread.so)
===========================================================================
=======================<phase: configure >============================
===> Configuring for tfel-mfront-edf-3.2.1.1_4
===> Performing out-of-source build
/bin/mkdir -p /wrkdirs/usr/ports/science/tfel-edf/work/.build
CMake Warning (dev) in CMakeLists.txt:
No project() command is present. The top-level CMakeLists.txt file must
contain a literal, direct call to the project() command. Add a line of
code such as
project(ProjectName)
near the top of the file, but after cmake_minimum_required().
CMake is pretending there is a "project(Project)" command on the first
line.
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) in CMakeLists.txt:
cmake_minimum_required() should be called prior to this top-level project()
call. Please see the cmake-commands(7) manual for usage documentation of
both commands.
This warning is for project developers. Use -Wno-dev to suppress it.
-- The C compiler identification is unknown
-- The CXX compiler identification is unknown
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - failed
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc - broken
CMake Error at /usr/local/share/cmake/Modules/CMakeTestCCompiler.cmake:67 (message):
The C compiler
"/usr/bin/cc"
is not able to compile a simple test program.
It fails with the following output:
Change Dir: /wrkdirs/usr/ports/science/tfel-edf/work/.build/CMakeFiles/CMakeScratch/TryCompile-LRwQ1m
Run Build Command(s):/usr/local/bin/cmake -E env VERBOSE=1 /usr/bin/make -f Makefile cmTC_7b07c/fast && /usr/bin/make -f CMakeFiles/cmTC_7b07c.dir/build.make CMakeFiles/cmTC_7b07c.dir/build
Building C object CMakeFiles/cmTC_7b07c.dir/testCCompiler.c.o
/usr/bin/cc -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -o CMakeFiles/cmTC_7b07c.dir/testCCompiler.c.o -c /wrkdirs/usr/ports/science/tfel-edf/work/.build/CMakeFiles/CMakeScratch/TryCompile-LRwQ1m/testCCompiler.c
PLEASE submit a bug report to https://bugs.freebsd.org/submit/ and include the crash backtrace, preprocessed source, and associated run script.
Stack dump:
0. Program arguments: /usr/bin/cc -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -o CMakeFiles/cmTC_7b07c.dir/testCCompiler.c.o -c /wrkdirs/usr/ports/science/tfel-edf/work/.build/CMakeFiles/CMakeScratch/TryCompile-LRwQ1m/testCCompiler.c
1. <eof> parser at end of file
2. Code generation
3. Running pass 'Function Pass Manager' on module '/wrkdirs/usr/ports/science/tfel-edf/work/.build/CMakeFiles/CMakeScratch/TryCompile-LRwQ1m/testCCompiler.c'.
4. Running pass 'X86 DAG->DAG Instruction Selection' on function '@main'
#0 0x049f5de4 (/usr/bin/cc+0x49f5de4)
#1 0x049f62c0 (/usr/bin/cc+0x49f62c0)
#2 0x049f40ae (/usr/bin/cc+0x49f40ae)
#3 0x049f8103 (/usr/bin/cc+0x49f8103)
#4 0x05b70969 (/usr/bin/cc+0x5b70969)
cc: error: clang frontend command failed with exit code 139 (use -v to see invocation)
FreeBSD clang version 13.0.0 (git@github.com:llvm/llvm-project.git llvmorg-13.0.0-0-gd7b669b3a303)
Target: i386-unknown-freebsd12.4
Thread model: posix
InstalledDir: /usr/bin
cc: note: diagnostic msg:
********************
PLEASE ATTACH THE FOLLOWING FILES TO THE BUG REPORT:
Preprocessed source(s) and associated run script(s) are located at:
cc: note: diagnostic msg: /tmp/testCCompiler-653b3e.c
cc: note: diagnostic msg: /tmp/testCCompiler-653b3e.sh
cc: note: diagnostic msg:
********************
*** Error code 139
Stop.
make[2]: stopped in /wrkdirs/usr/ports/science/tfel-edf/work/.build/CMakeFiles/CMakeScratch/TryCompile-LRwQ1m
*** Error code 1
Stop.
make[1]: stopped in /wrkdirs/usr/ports/science/tfel-edf/work/.build/CMakeFiles/CMakeScratch/TryCompile-LRwQ1m
CMake will not be able to correctly generate this project.
Call Stack (most recent call first):
CMakeLists.txt
-- Configuring incomplete, errors occurred!
*** Error code 1
Stop.
make: stopped in /usr/ports/science/tfel-edf