[package - 124i386-quarterly][textproc/R-cran-readxl] Failed for R-cran-readxl-1.4.2 in stage
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Date: Tue, 22 Aug 2023 06:10:34 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: eduardo@FreeBSD.org
Log URL: https://pkg-status.freebsd.org/beefy4/data/124i386-quarterly/f3d8c4bf5c40/logs/R-cran-readxl-1.4.2.log
Build URL: https://pkg-status.freebsd.org/beefy4/build.html?mastername=124i386-quarterly&build=f3d8c4bf5c40
Log:
=>> Building textproc/R-cran-readxl
build started at Tue Aug 22 06:09:58 UTC 2023
port directory: /usr/ports/textproc/R-cran-readxl
package name: R-cran-readxl-1.4.2
building for: FreeBSD 124i386-quarterly-job-01 12.4-RELEASE-p4 FreeBSD 12.4-RELEASE-p4 i386
maintained by: eduardo@FreeBSD.org
Makefile ident:
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eduardo@FreeBSD.org
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=======================<phase: check-sanity >============================
===> License MIT accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> R-cran-readxl-1.4.2 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.19.2.pkg
[124i386-quarterly-job-01] Installing pkg-1.19.2...
[124i386-quarterly-job-01] Extracting pkg-1.19.2: .......... done
===> R-cran-readxl-1.4.2 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of R-cran-readxl-1.4.2
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License MIT accepted by the user
===> Fetching all distfiles required by R-cran-readxl-1.4.2 for building
===========================================================================
=======================<phase: checksum >============================
===> License MIT accepted by the user
===> Fetching all distfiles required by R-cran-readxl-1.4.2 for building
=> SHA256 Checksum OK for readxl_1.4.2.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> License MIT accepted by the user
===> Fetching all distfiles required by R-cran-readxl-1.4.2 for building
===> Extracting for R-cran-readxl-1.4.2
=> SHA256 Checksum OK for readxl_1.4.2.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for R-cran-readxl-1.4.2
===========================================================================
=======================<phase: build-depends >============================
===> R-cran-readxl-1.4.2 depends on package: R-cran-knitr>0 - not found
===> Installing existing package /packages/All/R-cran-knitr-1.43.pkg
[124i386-quarterly-job-01] Installing R-cran-knitr-1.43...
[124i386-quarterly-job-01] `-- Installing R-4.3.1...
[124i386-quarterly-job-01] | `-- Installing cairo-1.17.4_2,3...
[124i386-quarterly-job-01] | | `-- Installing fontconfig-2.14.2,1...
[124i386-quarterly-job-01] | | `-- Installing expat-2.5.0...
[124i386-quarterly-job-01] | | `-- Extracting expat-2.5.0: .......... done
[124i386-quarterly-job-01] | | `-- Installing freetype2-2.12.1_2...
[124i386-quarterly-job-01] | | | `-- Installing brotli-1.0.9,1...
[124i386-quarterly-job-01] | | | `-- Extracting brotli-1.0.9,1: .......... done
[124i386-quarterly-job-01] | | | `-- Installing png-1.6.39...
[124i386-quarterly-job-01] | | | `-- Extracting png-1.6.39: .......... done
<snip>
--
This package installs a script named dvipdf that depends on dvips. If you
want to use this script you need to install print/tex-dvipsk.
=====
Message from libthai-0.1.29:
--
===> NOTICE:
The libthai port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:
https://bugs.freebsd.org/bugzilla
More information about port maintainership is available at:
https://docs.freebsd.org/en/articles/contributing/#ports-contributing
=====
Message from dejavu-2.37_1:
--
Make sure that the freetype module is loaded. If it is not, add the following
line to the "Modules" section of your X Windows configuration file:
Load "freetype"
Add the following line to the "Files" section of X Windows configuration file:
FontPath "/usr/local/share/fonts/dejavu/"
Note: your X Windows configuration file is typically /etc/X11/XF86Config
if you are using XFree86, and /etc/X11/xorg.conf if you are using X.Org.
===> R-cran-readxl-1.4.2 depends on package: R-cran-knitr>0 - found
===> Returning to build of R-cran-readxl-1.4.2
===> R-cran-readxl-1.4.2 depends on package: R-cran-cpp11>=0.4.0 - not found
===> Installing existing package /packages/All/R-cran-cpp11-0.4.3.pkg
[124i386-quarterly-job-01] Installing R-cran-cpp11-0.4.3...
[124i386-quarterly-job-01] Extracting R-cran-cpp11-0.4.3: .......... done
=====
Message from R-cran-cpp11-0.4.3:
--
===> NOTICE:
The R-cran-cpp11 port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:
https://bugs.freebsd.org/bugzilla
More information about port maintainership is available at:
https://docs.freebsd.org/en/articles/contributing/#ports-contributing
===> R-cran-readxl-1.4.2 depends on package: R-cran-cpp11>=0.4.0 - found
===> Returning to build of R-cran-readxl-1.4.2
===> R-cran-readxl-1.4.2 depends on package: R-cran-progress>0 - not found
===> Installing existing package /packages/All/R-cran-progress-1.2.2_3.pkg
[124i386-quarterly-job-01] Installing R-cran-progress-1.2.2_3...
[124i386-quarterly-job-01] `-- Installing R-cran-R6-2.5.1_1...
[124i386-quarterly-job-01] `-- Extracting R-cran-R6-2.5.1_1: .......... done
[124i386-quarterly-job-01] `-- Installing R-cran-crayon-1.5.2_1...
[124i386-quarterly-job-01] `-- Extracting R-cran-crayon-1.5.2_1: .......... done
[124i386-quarterly-job-01] `-- Installing R-cran-hms-1.1.3...
[124i386-quarterly-job-01] | `-- Installing R-cran-lifecycle-1.0.3_1...
[124i386-quarterly-job-01] | | `-- Installing R-cran-cli-3.6.1...
[124i386-quarterly-job-01] | | `-- Extracting R-cran-cli-3.6.1: .......... done
[124i386-quarterly-job-01] | | `-- Installing R-cran-glue-1.6.2_1...
[124i386-quarterly-job-01] | | `-- Extracting R-cran-glue-1.6.2_1: .......... done
[124i386-quarterly-job-01] | | `-- Installing R-cran-rlang-1.1.1...
[124i386-quarterly-job-01] | | `-- Extracting R-cran-rlang-1.1.1: .......... done
[124i386-quarterly-job-01] | `-- Extracting R-cran-lifecycle-1.0.3_1: .......... done
[124i386-quarterly-job-01] | `-- Installing R-cran-pkgconfig-2.0.3_2...
[124i386-quarterly-job-01] | `-- Extracting R-cran-pkgconfig-2.0.3_2: .......... done
[124i386-quarterly-job-01] | `-- Installing R-cran-vctrs-0.6.3...
[124i386-quarterly-job-01] | `-- Extracting R-cran-vctrs-0.6.3: .......... done
[124i386-quarterly-job-01] `-- Extracting R-cran-hms-1.1.3: .......... done
[124i386-quarterly-job-01] `-- Installing R-cran-prettyunits-1.1.1_2...
[124i386-quarterly-job-01] | `-- Installing R-cran-assertthat-0.2.1_3...
[124i386-quarterly-job-01] | `-- Extracting R-cran-assertthat-0.2.1_3: .......... done
[124i386-quarterly-job-01] | `-- Installing R-cran-magrittr-2.0.3_1...
[124i386-quarterly-job-01] | `-- Extracting R-cran-magrittr-2.0.3_1: .......... done
[124i386-quarterly-job-01] `-- Extracting R-cran-prettyunits-1.1.1_2: .......... done
[124i386-quarterly-job-01] Extracting R-cran-progress-1.2.2_3: .......... done
===> R-cran-readxl-1.4.2 depends on package: R-cran-progress>0 - found
===> Returning to build of R-cran-readxl-1.4.2
===> R-cran-readxl-1.4.2 depends on file: /usr/local/bin/R - found
===> R-cran-readxl-1.4.2 depends on executable: gfortran12 - found
===> R-cran-readxl-1.4.2 depends on file: /usr/local/bin/as - found
===========================================================================
=======================<phase: lib-depends >============================
===========================================================================
=======================<phase: configure >============================
===> Configuring for R-cran-readxl-1.4.2
===========================================================================
=======================<phase: build >============================
===========================================================================
=======================<phase: run-depends >============================
===> R-cran-readxl-1.4.2 depends on package: R-cran-cpp11>=0.4.0 - found
===> R-cran-readxl-1.4.2 depends on package: R-cran-tibble>=2.0.1 - not found
===> Installing existing package /packages/All/R-cran-tibble-3.2.1_1.pkg
[124i386-quarterly-job-01] Installing R-cran-tibble-3.2.1_1...
[124i386-quarterly-job-01] `-- Installing R-cran-fansi-1.0.4...
[124i386-quarterly-job-01] `-- Extracting R-cran-fansi-1.0.4: .......... done
[124i386-quarterly-job-01] `-- Installing R-cran-pillar-1.9.0...
[124i386-quarterly-job-01] | `-- Installing R-cran-utf8-1.2.3...
[124i386-quarterly-job-01] | `-- Extracting R-cran-utf8-1.2.3: .......... done
[124i386-quarterly-job-01] `-- Extracting R-cran-pillar-1.9.0: .......... done
[124i386-quarterly-job-01] Extracting R-cran-tibble-3.2.1_1: .......... done
===> R-cran-readxl-1.4.2 depends on package: R-cran-tibble>=2.0.1 - found
===> Returning to build of R-cran-readxl-1.4.2
===> R-cran-readxl-1.4.2 depends on package: R-cran-cellranger>0 - not found
===> Installing existing package /packages/All/R-cran-cellranger-1.1.0_4.pkg
[124i386-quarterly-job-01] Installing R-cran-cellranger-1.1.0_4...
[124i386-quarterly-job-01] `-- Installing R-cran-rematch-1.0.1_4...
[124i386-quarterly-job-01] `-- Extracting R-cran-rematch-1.0.1_4: .......... done
[124i386-quarterly-job-01] Extracting R-cran-cellranger-1.1.0_4: .......... done
=====
Message from R-cran-rematch-1.0.1_4:
--
===> NOTICE:
The R-cran-rematch port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:
https://bugs.freebsd.org/bugzilla
More information about port maintainership is available at:
https://docs.freebsd.org/en/articles/contributing/#ports-contributing
=====
Message from R-cran-cellranger-1.1.0_4:
--
===> NOTICE:
The R-cran-cellranger port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:
https://bugs.freebsd.org/bugzilla
More information about port maintainership is available at:
https://docs.freebsd.org/en/articles/contributing/#ports-contributing
===> R-cran-readxl-1.4.2 depends on package: R-cran-cellranger>0 - found
===> Returning to build of R-cran-readxl-1.4.2
===> R-cran-readxl-1.4.2 depends on package: R-cran-progress>0 - found
===> R-cran-readxl-1.4.2 depends on file: /usr/local/bin/R - found
===> R-cran-readxl-1.4.2 depends on executable: gfortran12 - found
===========================================================================
=======================<phase: stage >============================
===> Staging for R-cran-readxl-1.4.2
===> Generating temporary packing list
* installing *source* package 'readxl' ...
** package 'readxl' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: 'FreeBSD clang version 13.0.0 (git@github.com:llvm/llvm-project.git llvmorg-13.0.0-0-gd7b669b3a303)'
using C++ compiler: 'FreeBSD clang version 13.0.0 (git@github.com:llvm/llvm-project.git llvmorg-13.0.0-0-gd7b669b3a303)'
gmake[1]: Entering directory '/wrkdirs/usr/ports/textproc/R-cran-readxl/work/readxl/src'
c++ -std=gnu++17 -I"/usr/local/lib/R/include" -DNDEBUG -Iunix -I. -I'/usr/local/lib/R/library/cpp11/include' -I'/usr/local/lib/R/library/progress/include' -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c cpp11.cpp -o cpp11.o
PLEASE submit a bug report to https://bugs.freebsd.org/submit/ and include the crash backtrace, preprocessed source, and associated run script.
Stack dump:
0. Program arguments: c++ -std=gnu++17 -I/usr/local/lib/R/include -DNDEBUG -Iunix -I. -I/usr/local/lib/R/library/cpp11/include -I/usr/local/lib/R/library/progress/include -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fvisibility=hidden -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c cpp11.cpp -o cpp11.o
1. <eof> parser at end of file
2. Code generation
3. Running pass 'Function Pass Manager' on module 'cpp11.cpp'.
4. Running pass 'X86 DAG->DAG Instruction Selection' on function '@_readxl_read_xls_'
#0 0x049f5de4 (/usr/bin/c+++0x49f5de4)
#1 0x049f62c0 (/usr/bin/c+++0x49f62c0)
#2 0x049f40ae (/usr/bin/c+++0x49f40ae)
#3 0x049f8103 (/usr/bin/c+++0x49f8103)
#4 0x05b70969 (/usr/bin/c+++0x5b70969)
c++: error: clang frontend command failed with exit code 139 (use -v to see invocation)
FreeBSD clang version 13.0.0 (git@github.com:llvm/llvm-project.git llvmorg-13.0.0-0-gd7b669b3a303)
Target: i386-unknown-freebsd12.4
Thread model: posix
InstalledDir: /usr/bin
c++: note: diagnostic msg:
********************
PLEASE ATTACH THE FOLLOWING FILES TO THE BUG REPORT:
Preprocessed source(s) and associated run script(s) are located at:
c++: note: diagnostic msg: /tmp/cpp11-10d018.cpp
c++: note: diagnostic msg: /tmp/cpp11-10d018.sh
c++: note: diagnostic msg:
********************
gmake[1]: *** [/usr/local/lib/R/etc/Makeconf:198: cpp11.o] Error 139
gmake[1]: Leaving directory '/wrkdirs/usr/ports/textproc/R-cran-readxl/work/readxl/src'
ERROR: compilation failed for package 'readxl'
* removing '/wrkdirs/usr/ports/textproc/R-cran-readxl/work/stage/usr/local/lib/R/library/readxl'
*** Error code 1
Stop.
make: stopped in /usr/ports/textproc/R-cran-readxl