From nobody Fri Nov 25 21:00:03 2022 X-Original-To: pkg-fallout@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4NJnLW4XLsz4hRfw for ; Fri, 25 Nov 2022 21:00:03 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4NJnLW2Z4vz3LJq; Fri, 25 Nov 2022 21:00:03 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1669410003; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:cc; bh=cAL+p+G/7R5crzraCYL6JthlEJBBqIHwhIXU5DXVp5k=; b=xynzcpSU358PEq6vsoal4/DLoJb1DVYDOOaJiU3AMO4K6sFVNDhWkprBbCPsBoQfw+qSwf J33vVZQm/d0CzQ0M9kwhGMkePSMUl/NScNQ2n+f2Rc4Ww/88zBMmk8++wz2yCu8bT7UGQO fEgvQ9MQg1qYcvsWbCPq916fLHAc9x2kOWWbLk4VoX0sC1rbROHN19Pe0zIYnOEZF2UNdq jaeE95vDKFe38J7/3d+jZB+dgshUxnizdqy0O9pvfbn4LoNGUcJxAoY8fD3gTtgrxpdF16 EJCOZ10snmQN//vstVuGuHcSwaC0ctxxAknAPDlvV93JmR4GNP14sFqhMarCjw== ARC-Authentication-Results: i=1; mx1.freebsd.org; none ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1669410003; a=rsa-sha256; cv=none; b=OHKUHf/KEXr0fPm9EKIVZirkgoKaigFvHDD+UMxrf0syCmg0VSdSVRls7K6OtvqJ7WSgOI tTjERAUCuxSLkxIjPDBWO/66BS+yZOE9tVy7XeQw29BsPHDb6WmO2EVy26hUWqwRUvt7xL uYul/LhqS5ndmB7IzOW+Y02wo5eh6GB4R566GtSzS5pRrCIPrraQF6EGVvDO68KROUr2PJ Y9kqhKwygzTKgKgmmY7i6qIBy7iSW6uUH382uXUCNb52pKYach+3zc3JRVtQNY1UsJrAd/ lyy3+U01Q6JuzekkTPXYeoEcD7DObdQGS6nz57UQLTAXqeQtZA7ubusXBrbmFQ== Received: from beefy5.nyi.freebsd.org (beefy5.nyi.freebsd.org [IPv6:2610:1c1:1:6080::16:14]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 4NJnLW1czMzv5C; Fri, 25 Nov 2022 21:00:03 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from beefy5.nyi.freebsd.org (localhost [127.0.0.1]) by beefy5.nyi.freebsd.org (8.16.1/8.16.1) with ESMTP id 2APL03SW043363; Fri, 25 Nov 2022 21:00:03 GMT (envelope-from pkg-fallout@FreeBSD.org) Received: (from root@localhost) by beefy5.nyi.freebsd.org (8.16.1/8.16.1/Submit) id 2APL03Fq043362; Fri, 25 Nov 2022 21:00:03 GMT (envelope-from pkg-fallout@FreeBSD.org) Date: Fri, 25 Nov 2022 21:00:03 GMT From: pkg-fallout@FreeBSD.org Message-Id: <202211252100.2APL03Fq043362@beefy5.nyi.freebsd.org> To: yuri@FreeBSD.org Subject: [package - 123i386-default][science/cif-tools] Failed for cif-tools-1.0.3 in build Cc: pkg-fallout@FreeBSD.org X-ThisMailContainsUnwantedMimeParts: N List-Id: Fallout logs from package building List-Archive: https://lists.freebsd.org/archives/freebsd-pkg-fallout List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-freebsd-pkg-fallout@freebsd.org You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: yuri@FreeBSD.org Log URL: https://pkg-status.freebsd.org/beefy5/data/123i386-default/62230210f012/logs/cif-tools-1.0.3.log Build URL: https://pkg-status.freebsd.org/beefy5/build.html?mastername=123i386-default&build=62230210f012 Log: =>> Building science/cif-tools build started at Fri Nov 25 20:59:34 UTC 2022 port directory: /usr/ports/science/cif-tools package name: cif-tools-1.0.3 building for: FreeBSD 123i386-default-job-04 12.3-RELEASE-p9 FreeBSD 12.3-RELEASE-p9 i386 maintained by: yuri@FreeBSD.org Makefile ident: Poudriere version: 3.2.8-23-ga7f8d188 Host OSVERSION: 1400073 Jail OSVERSION: 1203000 Job Id: 04 ---Begin Environment--- SHELL=/bin/csh UNAME_p=i386 UNAME_m=i386 OSVERSION=1203000 UNAME_v=FreeBSD 12.3-RELEASE-p9 UNAME_r=12.3-RELEASE-p9 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-23-ga7f8d188 MASTERMNT=/usr/local/poudriere/data/.m/123i386-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/123i386-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=123i386-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/123i386-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/science/cif-tools/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/cif-tools/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/cif-tools/work/.cache HOME=/wrkdirs/usr/ports/science/cif-tools/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/cif-tools/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/cif-tools/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- NINJA_STATUS="[%p %s/%t] " XDG_DATA_HOME=/wrkdirs/usr/ports/science/cif-tools/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/cif-tools/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/cif-tools/work/.cache HOME=/wrkdirs/usr/ports/science/cif-tools/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/cif-tools/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/cif-tools/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES DESTDIR=/wrkdirs/usr/ports/science/cif-tools/work/stage PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_ INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- CMAKE_BUILD_TYPE="release" OSREL=12.3 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/cif-tools" EXAMPLESDIR="share/examples/cif-tools" DATADIR="share/cif-tools" WWWDIR="www/cif-tools" ETCDIR="etc/cif-tools" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/cif-tools DOCSDIR=/usr/local/share/doc/cif-tools EXAMPLESDIR=/usr/local/share/examples/cif-tools WWWDIR=/usr/local/www/cif-tools ETCDIR=/usr/local/etc/cif-tools --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes MACHINE=i386 MACHINE_ARCH=i386 ARCH=${MACHINE_ARCH} #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_921dbbb2=FreeBSD clang version 10.0.1 (git@github.com:llvm/llvm-project.git llvmorg-10.0.1-0-gef32c611aa2) Target: i386-unknown-freebsd12.3 Thread model: posix InstalledDir: /usr/bin _ALTCCVERSION_921dbbb2=none _CXXINTERNAL_acaad9ca=FreeBSD clang version 10.0.1 (git@github.com:llvm/llvm-project.git llvmorg-10.0.1-0-gef32c611aa2) Target: i386-unknown-freebsd12.3 Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-m" "elf_i386_fbsd" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_921dbbb2_58173849=yes CC_OUTPUT_921dbbb2_9bdba57c=yes CC_OUTPUT_921dbbb2_6a4fe7f5=yes CC_OUTPUT_921dbbb2_6bcac02b=yes CC_OUTPUT_921dbbb2_67d20829=yes CC_OUTPUT_921dbbb2_bfa62e83=yes CC_OUTPUT_921dbbb2_f0b4d593=yes CC_OUTPUT_921dbbb2_308abb44=yes CC_OUTPUT_921dbbb2_f00456e5=yes CC_OUTPUT_921dbbb2_65ad290d=yes CC_OUTPUT_921dbbb2_f2776b26=yes CC_OUTPUT_921dbbb2_53255a77=yes CC_OUTPUT_921dbbb2_911cfe02=error: invalid value 'c++2b' in '-std=c++2b' note: use 'c++98' or 'c++03' for 'ISO C++ 1998 with amendments' standard note: use 'gnu++98' or 'gnu++03' for 'ISO C++ 1998 with amendments and GNU extensions' standard note: use 'c++11' for 'ISO C++ 2011 with amendments' standard note: use 'gnu++11' for 'ISO C++ 2011 with amendments and GNU extensions' standard note: use 'c++14' for 'ISO C++ 2014 with amendments' standard note: use 'gnu++14' for 'ISO C++ 2014 with amendments and GNU extensions' standard note: use 'c++17' for 'ISO C++ 2017 with amendments' standard note: use 'gnu++17' for 'ISO C++ 2017 with amendments and GNU extensions' standard note: use 'c++20' for 'ISO C++ 2020 DIS' standard note: use 'gnu++20' for 'ISO C++ 2020 DIS with GNU extensions' standard CC_OUTPUT_921dbbb2_b2657cc3=yes CC_OUTPUT_921dbbb2_380987f7=yes CC_OUTPUT_921dbbb2_160933ec=yes CC_OUTPUT_921dbbb2_fb62803b=yes CC_OUTPUT_921dbbb2_af59ad06=yes CC_OUTPUT_921dbbb2_a15f3fcf=error: invalid value 'gnu++2b' in '-std=gnu++2b' note: use 'c++98' or 'c++03' for 'ISO C++ 1998 with amendments' standard note: use 'gnu++98' or 'gnu++03' for 'ISO C++ 1998 with amendments and GNU extensions' standard note: use 'c++11' for 'ISO C++ 2011 with amendments' standard note: use 'gnu++11' for 'ISO C++ 2011 with amendments and GNU extensions' standard note: use 'c++14' for 'ISO C++ 2014 with amendments' standard note: use 'gnu++14' for 'ISO C++ 2014 with amendments and GNU extensions' standard note: use 'c++17' for 'ISO C++ 2017 with amendments' standard note: use 'gnu++17' for 'ISO C++ 2017 with amendments and GNU extensions' standard note: use 'c++20' for 'ISO C++ 2020 DIS' standard note: use 'gnu++20' for 'ISO C++ 2020 DIS with GNU extensions' standard _OBJC_CCVERSION_921dbbb2=FreeBSD clang version 10.0.1 (git@github.com:llvm/llvm-project.git llvmorg-10.0.1-0-gef32c611aa2) Target: i386-unknown-freebsd12.3 Thread model: posix InstalledDir: /usr/bin _OBJC_ALTCCVERSION_921dbbb2=none ARCH=i386 OPSYS=FreeBSD _OSRELEASE=12.3-RELEASE-p9 OSREL=12.3 OSVERSION=1203000 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=524288 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 524288 stack size (kbytes, -s) 65536 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =================================================== ===> License BSD2CLAUSE accepted by the user =========================================================================== =================================================== ===> cif-tools-1.0.3 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.18.4.pkg [123i386-default-job-04] Installing pkg-1.18.4... [123i386-default-job-04] Extracting pkg-1.18.4: .......... done ===> cif-tools-1.0.3 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of cif-tools-1.0.3 =========================================================================== =================================================== =========================================================================== =================================================== ===> License BSD2CLAUSE accepted by the user ===> Fetching all distfiles required by cif-tools-1.0.3 for building =========================================================================== =================================================== ===> License BSD2CLAUSE accepted by the user ===> Fetching all distfiles required by cif-tools-1.0.3 for building => SHA256 Checksum OK for PDB-REDO-cif-tools-v1.0.3_GH0.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> License BSD2CLAUSE accepted by the user ===> Fetching all distfiles required by cif-tools-1.0.3 for building ===> Extracting for cif-tools-1.0.3 => SHA256 Checksum OK for PDB-REDO-cif-tools-v1.0.3_GH0.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Patching for cif-tools-1.0.3 ===> Applying FreeBSD patches for cif-tools-1.0.3 from /usr/ports/science/cif-tools/files =========================================================================== =================================================== ===> cif-tools-1.0.3 depends on file: /usr/local/bin/cmake - not found ===> Installing existing package /packages/All/cmake-core-3.24.3_2.pkg [123i386-default-job-04] Installing cmake-core-3.24.3_2... [123i386-default-job-04] `-- Installing expat-2.5.0... [123i386-default-job-04] `-- Extracting expat-2.5.0: .......... done [123i386-default-job-04] `-- Installing jsoncpp-1.9.5... [123i386-default-job-04] `-- Extracting jsoncpp-1.9.5: .......... done [123i386-default-job-04] `-- Installing libuv-1.44.2... [123i386-default-job-04] `-- Extracting libuv-1.44.2: .......... done [123i386-default-job-04] `-- Installing rhash-1.4.3... [123i386-default-job-04] | `-- Installing gettext-runtime-0.21... [123i386-default-job-04] | | `-- Installing indexinfo-0.3.1... [123i386-default-job-04] | | `-- Extracting indexinfo-0.3.1: .... done [123i386-default-job-04] | `-- Extracting gettext-runtime-0.21: .......... done [123i386-default-job-04] `-- Extracting rhash-1.4.3: .......... done [123i386-default-job-04] Extracting cmake-core-3.24.3_2: .......... done ===> cif-tools-1.0.3 depends on file: /usr/local/bin/cmake - found ===> Returning to build of cif-tools-1.0.3 ===> cif-tools-1.0.3 depends on executable: ninja - not found ===> Installing existing package /packages/All/ninja-1.11.1,2.pkg [123i386-default-job-04] Installing ninja-1.11.1,2... [123i386-default-job-04] `-- Installing python39-3.9.15_1... [123i386-default-job-04] | `-- Installing libffi-3.4.3... [123i386-default-job-04] | `-- Extracting libffi-3.4.3: .......... done [123i386-default-job-04] | `-- Installing mpdecimal-2.5.1... [123i386-default-job-04] | `-- Extracting mpdecimal-2.5.1: .......... done [123i386-default-job-04] | `-- Installing readline-8.2.0... [123i386-default-job-04] | `-- Extracting readline-8.2.0: .......... done [123i386-default-job-04] `-- Extracting python39-3.9.15_1: .......... done [123i386-default-job-04] Extracting ninja-1.11.1,2: ........ done ===== Message from python39-3.9.15_1: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py39-gdbm databases/py-gdbm@py39 py39-sqlite3 databases/py-sqlite3@py39 py39-tkinter x11-toolkits/py-tkinter@py39 ===> cif-tools-1.0.3 depends on executable: ninja - found ===> Returning to build of cif-tools-1.0.3 =========================================================================== =================================================== ===> cif-tools-1.0.3 depends on shared library: libboost_iostreams.so - not found ===> Installing existing package /packages/All/boost-libs-1.80.0_1.pkg [123i386-default-job-04] Installing boost-libs-1.80.0_1... [123i386-default-job-04] `-- Installing icu-72.1,1... [123i386-default-job-04] `-- Extracting icu-72.1,1: .......... done [123i386-default-job-04] Extracting boost-libs-1.80.0_1: .......... done ===== Message from boost-libs-1.80.0_1: -- You have built the Boost library with thread support. Don't forget to add -pthread to your linker options when linking your code. ===> cif-tools-1.0.3 depends on shared library: libboost_iostreams.so - found (/usr/local/lib/libboost_iostreams.so) ===> Returning to build of cif-tools-1.0.3 ===> cif-tools-1.0.3 depends on shared library: libcifpp.so - not found ===> Installing existing package /packages/All/libcifpp-5.0.3.1.pkg [123i386-default-job-04] Installing libcifpp-5.0.3.1... [123i386-default-job-04] `-- Installing bash-5.2.9_1... [123i386-default-job-04] `-- Extracting bash-5.2.9_1: .......... done [123i386-default-job-04] Extracting libcifpp-5.0.3.1: .......... done ===> cif-tools-1.0.3 depends on shared library: libcifpp.so - found (/usr/local/lib/libcifpp.so) ===> Returning to build of cif-tools-1.0.3 =========================================================================== =================================================== ===> Configuring for cif-tools-1.0.3 ===> Performing out-of-source build /bin/mkdir -p /wrkdirs/usr/ports/science/cif-tools/work/.build -- The CXX compiler identification is Clang 10.0.1 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Looking for C++ include filesystem -- Looking for C++ include filesystem - found -- Performing Test CXX_FILESYSTEM_NO_LINK_NEEDED -- Performing Test CXX_FILESYSTEM_NO_LINK_NEEDED - Success CMake Warning at CMakeLists.txt:112 (find_package): By not providing "FindMrc.cmake" in CMAKE_MODULE_PATH this project has asked CMake to find a package configuration file provided by "Mrc", but CMake did not find one. Could not find a package configuration file provided by "Mrc" with any of the following names: MrcConfig.cmake mrc-config.cmake Add the installation prefix of "Mrc" to CMAKE_PREFIX_PATH or set "Mrc_DIR" to a directory containing one of the above files. If "Mrc" provides a separate development package or SDK, be sure it has been installed. CMake Warning at CMakeLists.txt:117 (message): Not using resources since mrc was not found -- Found Boost: /usr/local/include (found suitable version "1.80.0", minimum required is "1.70.0") found components: program_options -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Found ZLIB: /usr/lib/libz.so (found version "1.2.11") -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_COLOR_MAKEFILE CMAKE_C_COMPILER CMAKE_C_FLAGS CMAKE_C_FLAGS_DEBUG CMAKE_C_FLAGS_RELEASE CMAKE_MODULE_LINKER_FLAGS CMAKE_SHARED_LINKER_FLAGS CMAKE_VERBOSE_MAKEFILE FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /wrkdirs/usr/ports/science/cif-tools/work/.build =========================================================================== =================================================== ===> Building for cif-tools-1.0.3 [ 4% 1/24] /usr/bin/c++ -DCACHE_DIR=\"/usr/local/var/cache/libcifpp\" -DDATA_DIR=\"/usr/local/share/libcifpp\" -I/wrkdirs/usr/ports/science/cif-tools/work/.build -I/wrkdirs/usr/ports/science/cif-tools/work/cif-tools-1.0.3/PRIVATE -I/wrkdirs/usr/ports/science/cif-tools/work/cif-tools-1.0.3/cifpp::cifpp -I/wrkdirs/usr/ports/science/cif-tools/work/cif-tools-1.0.3/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -pthread -std=gnu++17 -MD -MT CMakeFiles/pdb2cif.dir/src/pdb2cif.cpp.o -MF CMakeFiles/pdb2cif.dir/src/pdb2cif.cpp.o.d -o CMakeFiles/pdb2cif.dir/src/pdb2cif.cpp.o -c /wrkdirs/usr/ports/science/cif-tools/work/cif-tools-1.0.3/src/pdb2cif.cpp FAILED: CMakeFiles/pdb2cif.dir/src/pdb2cif.cpp.o /usr/bin/c++ -DCACHE_DIR=\"/usr/local/var/cache/libcifpp\" -DDATA_DIR=\"/usr/local/share/libcifpp\" -I/wrkdirs/usr/ports/science/cif-tools/work/.build -I/wrkdirs/usr/ports/science/cif-tools/work/cif-tools-1.0.3/PRIVATE -I/wrkdirs/usr/ports/science/cif-tools/work/cif-tools-1.0.3/cifpp::cifpp -I/wrkdirs/usr/ports/science/cif-tools/work/cif-tools-1.0.3/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -pthread -std=gnu++17 -MD -MT CMakeFiles/pdb2cif.dir/src/pdb2cif.cpp.o -MF CMakeFiles/pdb2cif.dir/src/pdb2cif.cpp.o.d -o CMakeFiles/pdb2cif.dir/src/pdb2cif.cpp.o -c /wrkdirs/usr/ports/science/cif-tools/work/cif-tools-1.0.3/src/pdb2cif.cpp /wrkdirs/usr/ports/science/cif-tools/work/cif-tools-1.0.3/src/pdb2cif.cpp:41:10: fatal error: 'cif++/Cif++.hpp' file not found #include "cif++/Cif++.hpp" ^~~~~~~~~~~~~~~~~ 1 error generated. ninja: build stopped: subcommand failed. *** Error code 1 Stop. make: stopped in /usr/ports/science/cif-tools