[package - main-amd64-default][math/combblas] Failed for CombBLAS-1.6.2_5 in build
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Date: Tue, 22 Mar 2022 07:40:19 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: yuri@FreeBSD.org
Log URL: http://beefy18.nyi.freebsd.org/data/main-amd64-default/pfa63d4de0a02_sfd6ca665d2/logs/CombBLAS-1.6.2_5.log
Build URL: http://beefy18.nyi.freebsd.org/build.html?mastername=main-amd64-default&build=pfa63d4de0a02_sfd6ca665d2
Log:
=>> Building math/combblas
build started at Tue Mar 22 07:39:49 UTC 2022
port directory: /usr/ports/math/combblas
package name: CombBLAS-1.6.2_5
building for: FreeBSD main-amd64-default-job-03 14.0-CURRENT FreeBSD 14.0-CURRENT 1400053 amd64
maintained by: yuri@FreeBSD.org
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=======================<phase: check-sanity >============================
===> License MIT accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> CombBLAS-1.6.2_5 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.17.5_1.pkg
[main-amd64-default-job-03] Installing pkg-1.17.5_1...
[main-amd64-default-job-03] Extracting pkg-1.17.5_1: .......... done
===> CombBLAS-1.6.2_5 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of CombBLAS-1.6.2_5
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License MIT accepted by the user
===> Fetching all distfiles required by CombBLAS-1.6.2_5 for building
===========================================================================
=======================<phase: checksum >============================
===> License MIT accepted by the user
===> Fetching all distfiles required by CombBLAS-1.6.2_5 for building
=> SHA256 Checksum OK for CombBLAS_beta_16_2.tgz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> License MIT accepted by the user
===> Fetching all distfiles required by CombBLAS-1.6.2_5 for building
===> Extracting for CombBLAS-1.6.2_5
=> SHA256 Checksum OK for CombBLAS_beta_16_2.tgz.
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for CombBLAS-1.6.2_5
===> Applying extra patch /usr/ports/math/combblas/files/extra-patch-CMakeLists.txt
===> Applying FreeBSD patches for CombBLAS-1.6.2_5 from /usr/ports/math/combblas/files
===========================================================================
=======================<phase: build-depends >============================
===> CombBLAS-1.6.2_5 depends on file: /usr/local/bin/cmake - not found
===> Installing existing package /packages/All/cmake-3.22.2.pkg
[main-amd64-default-job-03] Installing cmake-3.22.2...
[main-amd64-default-job-03] `-- Installing curl-7.81.0...
[main-amd64-default-job-03] | `-- Installing ca_root_nss-3.76...
[main-amd64-default-job-03] | `-- Extracting ca_root_nss-3.76: ........ done
[main-amd64-default-job-03] | `-- Installing libnghttp2-1.46.0...
<snip>
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/CombBLAS.h:113:
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/SpParMat.h:54:
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/DistEdgeList.h:129:
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/DistEdgeList.cpp:32:
/wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/ParFriends.h:1087:59: warning: 'bind2nd<std::plus<int>, int>' is deprecated [-Wdeprecated-declarations]
std::transform(trxinds, trxinds+trxlocnz, trxinds, std::bind2nd(std::plus<int32_t>(), roffset)); // fullydist indexing (p pieces) -> matrix indexing (sqrt(p) pieces)
^
/usr/include/c++/v1/__functional/binder2nd.h:45:1: note: 'bind2nd<std::plus<int>, int>' has been explicitly marked deprecated here
_LIBCPP_DEPRECATED_IN_CXX11 inline _LIBCPP_INLINE_VISIBILITY
^
/usr/include/c++/v1/__config:1004:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
# define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
^
/usr/include/c++/v1/__config:993:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/ReleaseTests/MultTest.cpp:36:
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/CombBLAS.h:119:
/wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/BFSFriends.h:136:82: warning: 'bind2nd<std::minus<int>, int>' is deprecated [-Wdeprecated-declarations]
std::transform(indy[i].begin(), indy[i].end(), indy[i].begin(), std::bind2nd(std::minus<int32_t>(), perproc*beg_rec));
^
/usr/include/c++/v1/__functional/binder2nd.h:45:1: note: 'bind2nd<std::minus<int>, int>' has been explicitly marked deprecated here
_LIBCPP_DEPRECATED_IN_CXX11 inline _LIBCPP_INLINE_VISIBILITY
^
/usr/include/c++/v1/__config:1004:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
# define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
^
/usr/include/c++/v1/__config:993:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
/wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/ReleaseTests/MultTest.cpp:186:13: warning: 'bind1st<std::multiplies<double>, int>' is deprecated [-Wdeprecated-declarations]
spx.Apply(bind1st (multiplies<double>(), 100));
^
/usr/include/c++/v1/__functional/binder1st.h:45:1: note: 'bind1st<std::multiplies<double>, int>' has been explicitly marked deprecated here
_LIBCPP_DEPRECATED_IN_CXX11 inline _LIBCPP_INLINE_VISIBILITY
^
/usr/include/c++/v1/__config:1004:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
# define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
^
/usr/include/c++/v1/__config:993:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/ReleaseTests/MultTest.cpp:36:
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/CombBLAS.h:110:
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/SpTuples.h:38:
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/SpMat.h:178:
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/SpMat.cpp:32:
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/Friends.h:35:
/wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/SpHelper.h:156:55: warning: format specifies type 'long long *' but the argument has type 'int64_t *' (aka 'long *') [-Wformat]
sscanf(itr->c_str(), "%lld %lld %lg", &ii, &jj, &vv);
~~~~ ^~~
%ld
/wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/SpParMat.cpp:3516:15: note: in instantiation of function template specialization 'combblas::SpHelper::ProcessLines<long, double>' requested here
SpHelper::ProcessLines(rows, cols, vals, lines, symmetric, type, onebased);
^
/wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/ReleaseTests/MultTest.cpp:108:5: note: in instantiation of function template specialization 'combblas::SpParMat<long, double, combblas::SpDCCols<long, double>>::ParallelReadMM<combblas::maximum<double>>' requested here
A.ParallelReadMM(Aname, true, maximum<double>());
^
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/ReleaseTests/MultTest.cpp:36:
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/CombBLAS.h:110:
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/SpTuples.h:38:
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/SpMat.h:178:
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/SpMat.cpp:32:
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/Friends.h:35:
/wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/SpHelper.h:156:60: warning: format specifies type 'long long *' but the argument has type 'int64_t *' (aka 'long *') [-Wformat]
sscanf(itr->c_str(), "%lld %lld %lg", &ii, &jj, &vv);
~~~~ ^~~
%ld
/wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/SpHelper.h:165:56: warning: format specifies type 'long long *' but the argument has type 'int64_t *' (aka 'long *') [-Wformat]
sscanf(itr->c_str(), "%lld %lld %lld", &ii, &jj, &vv);
~~~~ ^~~
%ld
/wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/SpHelper.h:165:61: warning: format specifies type 'long long *' but the argument has type 'int64_t *' (aka 'long *') [-Wformat]
sscanf(itr->c_str(), "%lld %lld %lld", &ii, &jj, &vv);
~~~~ ^~~
%ld
/wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/SpHelper.h:165:66: warning: format specifies type 'long long *' but the argument has type 'int64_t *' (aka 'long *') [-Wformat]
sscanf(itr->c_str(), "%lld %lld %lld", &ii, &jj, &vv);
~~~~ ^~~
%ld
/wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/SpHelper.h:174:51: warning: format specifies type 'long long *' but the argument has type 'int64_t *' (aka 'long *') [-Wformat]
sscanf(itr->c_str(), "%lld %lld", &ii, &jj);
~~~~ ^~~
%ld
/wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/SpHelper.h:174:56: warning: format specifies type 'long long *' but the argument has type 'int64_t *' (aka 'long *') [-Wformat]
sscanf(itr->c_str(), "%lld %lld", &ii, &jj);
~~~~ ^~~
%ld
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/ReleaseTests/MultTest.cpp:36:
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/CombBLAS.h:111:
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/SpDCCols.h:39:
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/dcsc.h:134:
/wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/dcsc.cpp:1055:46: warning: 'bind2nd<std::minus<long>, long>' is deprecated [-Wdeprecated-declarations]
transform(B->jc, B->jc + (nzc-pos), B->jc, bind2nd(std::minus<IT>(), cut));
^
/wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/SpDCCols.cpp:881:9: note: in instantiation of member function 'combblas::Dcsc<long, double>::Split' requested here
dcsc->Split(Adcsc, Bdcsc, cut);
^
/wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/ParFriends.h:635:13: note: in instantiation of member function 'combblas::SpDCCols<long, double>::Split' requested here
(A.spSeq)->Split( *A1seq, *A2seq);
^
/wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/ReleaseTests/MultTest.cpp:173:7: note: in instantiation of function template specialization 'combblas::Mult_AnXBn_DoubleBuff<combblas::PlusTimesSRing<double, double>, double, combblas::SpDCCols<long, double>, long, double, double, combblas::SpDCCols<long, double>, combblas::SpDCCols<long, double>>' requested here
C = Mult_AnXBn_DoubleBuff<PTDOUBLEDOUBLE, double, PSpMat<double>::DCCols >(A,B);
^
/usr/include/c++/v1/__functional/binder2nd.h:45:1: note: 'bind2nd<std::minus<long>, long>' has been explicitly marked deprecated here
_LIBCPP_DEPRECATED_IN_CXX11 inline _LIBCPP_INLINE_VISIBILITY
^
/usr/include/c++/v1/__config:1004:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
# define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
^
/usr/include/c++/v1/__config:993:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/ReleaseTests/MultTest.cpp:36:
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/CombBLAS.h:111:
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/SpDCCols.h:39:
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/dcsc.h:134:
/wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/dcsc.cpp:1057:48: warning: 'bind2nd<std::minus<long>, long>' is deprecated [-Wdeprecated-declarations]
transform(B->cp, B->cp + (nzc-pos+1), B->cp, bind2nd(std::minus<IT>(), cp[pos]));
^
/usr/include/c++/v1/__functional/binder2nd.h:45:1: note: 'bind2nd<std::minus<long>, long>' has been explicitly marked deprecated here
_LIBCPP_DEPRECATED_IN_CXX11 inline _LIBCPP_INLINE_VISIBILITY
^
/usr/include/c++/v1/__config:1004:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
# define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
^
/usr/include/c++/v1/__config:993:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/ReleaseTests/MultTest.cpp:36:
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/CombBLAS.h:111:
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/SpDCCols.h:469:
/wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/SpDCCols.cpp:1003:71: warning: 'bind2nd<std::plus<long>, long>' is deprecated [-Wdeprecated-declarations]
std::transform(Cdcsc->jc, Cdcsc->jc + Cdcsc->nzc, Cdcsc->jc, std::bind2nd(std::plus<IT>(), partA.n));
^
/wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/ParFriends.h:763:14: note: in instantiation of member function 'combblas::SpDCCols<long, double>::Merge' requested here
(A.spSeq)->Merge(*A1seq, *A2seq);
^
/wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/ReleaseTests/MultTest.cpp:173:7: note: in instantiation of function template specialization 'combblas::Mult_AnXBn_DoubleBuff<combblas::PlusTimesSRing<double, double>, double, combblas::SpDCCols<long, double>, long, double, double, combblas::SpDCCols<long, double>, combblas::SpDCCols<long, double>>' requested here
C = Mult_AnXBn_DoubleBuff<PTDOUBLEDOUBLE, double, PSpMat<double>::DCCols >(A,B);
^
/usr/include/c++/v1/__functional/binder2nd.h:45:1: note: 'bind2nd<std::plus<long>, long>' has been explicitly marked deprecated here
_LIBCPP_DEPRECATED_IN_CXX11 inline _LIBCPP_INLINE_VISIBILITY
^
/usr/include/c++/v1/__config:1004:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
# define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
^
/usr/include/c++/v1/__config:993:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/ReleaseTests/MultTest.cpp:36:
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/CombBLAS.h:111:
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/SpDCCols.h:39:
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/dcsc.h:134:
/wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/dcsc.cpp:1145:50: warning: 'bind2nd<std::plus<long>, long>' is deprecated [-Wdeprecated-declarations]
transform(jc + A->nzc, jc + cnzc, jc + A->nzc, bind2nd(std::plus<IT>(), cut));
^
/wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/SpDCCols.cpp:1011:10: note: in instantiation of member function 'combblas::Dcsc<long, double>::Merge' requested here
Cdcsc->Merge(partA.dcsc, partB.dcsc, partA.n);
^
/wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/ParFriends.h:763:14: note: in instantiation of member function 'combblas::SpDCCols<long, double>::Merge' requested here
(A.spSeq)->Merge(*A1seq, *A2seq);
^
/wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/ReleaseTests/MultTest.cpp:173:7: note: in instantiation of function template specialization 'combblas::Mult_AnXBn_DoubleBuff<combblas::PlusTimesSRing<double, double>, double, combblas::SpDCCols<long, double>, long, double, double, combblas::SpDCCols<long, double>, combblas::SpDCCols<long, double>>' requested here
C = Mult_AnXBn_DoubleBuff<PTDOUBLEDOUBLE, double, PSpMat<double>::DCCols >(A,B);
^
/usr/include/c++/v1/__functional/binder2nd.h:45:1: note: 'bind2nd<std::plus<long>, long>' has been explicitly marked deprecated here
_LIBCPP_DEPRECATED_IN_CXX11 inline _LIBCPP_INLINE_VISIBILITY
^
/usr/include/c++/v1/__config:1004:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
# define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
^
/usr/include/c++/v1/__config:993:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/ReleaseTests/MultTest.cpp:36:
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/CombBLAS.h:111:
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/SpDCCols.h:39:
In file included from /wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/dcsc.h:134:
/wrkdirs/usr/ports/math/combblas/work/CombBLAS_beta_16_2/include/CombBLAS/dcsc.cpp:1149:50: warning: 'bind2nd<std::plus<long>, long>' is deprecated [-Wdeprecated-declarations]
transform(cp + A->nzc, cp+cnzc+1, cp + A->nzc, bind2nd(std::plus<IT>(), A->cp[A->nzc]));
^
/usr/include/c++/v1/__functional/binder2nd.h:45:1: note: 'bind2nd<std::plus<long>, long>' has been explicitly marked deprecated here
_LIBCPP_DEPRECATED_IN_CXX11 inline _LIBCPP_INLINE_VISIBILITY
^
/usr/include/c++/v1/__config:1004:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
# define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
^
/usr/include/c++/v1/__config:993:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
26 warnings and 1 error generated.
ninja: build stopped: subcommand failed.
===> Compilation failed unexpectedly.
Try to set MAKE_JOBS_UNSAFE=yes and rebuild before reporting the failure to
the maintainer.
*** Error code 1
Stop.
make: stopped in /usr/ports/math/combblas