From nobody Sat Jul 23 21:29:44 2022 X-Original-To: pkg-fallout@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4LqzwT0h1cz4WYMV for ; Sat, 23 Jul 2022 21:29:45 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4LqzwS5jnzz3bTT for ; Sat, 23 Jul 2022 21:29:44 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from ampere3.nyi.freebsd.org (ampere3.nyi.freebsd.org [IPv6:2610:1c1:1:6080::16:26]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 4LqzwS4cKKztx1 for ; Sat, 23 Jul 2022 21:29:44 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from ampere3.nyi.freebsd.org (localhost [127.0.0.1]) by ampere3.nyi.freebsd.org (8.16.1/8.16.1) with ESMTP id 26NLTi4V047837 for ; Sat, 23 Jul 2022 21:29:44 GMT (envelope-from pkg-fallout@FreeBSD.org) Received: (from root@localhost) by ampere3.nyi.freebsd.org (8.16.1/8.16.1/Submit) id 26NLTiXF047834; Sat, 23 Jul 2022 21:29:44 GMT (envelope-from pkg-fallout@FreeBSD.org) Date: Sat, 23 Jul 2022 21:29:44 GMT From: pkg-fallout@FreeBSD.org Message-Id: <202207232129.26NLTiXF047834@ampere3.nyi.freebsd.org> To: pkg-fallout@FreeBSD.org Subject: [package - 130releng-armv7-default][biology/star] Failed for rna-STAR-2.7.9.a in build ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1658611784; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc; bh=cfw2MlOv7DquY8NUxcLeyLNXmkckMhTEaL9NZIWYt4Y=; b=qtiu41kpYLMIOh1WzLRYO5PKaIttItCAXKPqC3pwAjVouELZg2QTj4inLNTpmnZvVGS0Qo Op6WPdgg/uQfjHVBHMyqAUfcvF3n8b5PCe4s2M6tFX6wq/rD1MgWOZ9w+2zuByKIEIUMLy 20YcpCZt+TxXXUbWeJRDIjpz+akal2zOE32GJIK7wyOsG1B4LUZwnRdDMs7D5+Xa8w0M0M gkmuTeM/S5p0nFRkt085KXzBTBFmtTugrojJqjYhJ8L3nNgqU0T9Fhk76GK+6RAzc/zrQg DSVHmo0uTE5+b7rzZPeTMpHb557ryilhjY0FdHohMaP/7CibYWydtQLKQunauA== ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1658611784; a=rsa-sha256; cv=none; b=wg5dNwFCg8LG41BoQzQ4DPEetjyh7Y/Hoatpxj5ISukaXH2z8R6n6mZnKk1SY85TAVeFGD ZPmbFB9fclDkakGIh0cxz+3cIUbhZ/hM/dnXpxqqh4Ei7nAK57Gl8YqiceAQSGItGnd+hZ 1OGK6an6gwBb+K1LxUHkYX/xRvj8C6Xije7W5y7gGZnyWuWThbK/Fxb0HU077799zTIP5X 0gAfEXC4d5fmBMHWtGE2DWQsg/dYtfluucXD+7z2LQoVnNGsCsTJBFOScPED0fpo8Hv9cI rlCqnIuhJaTxbow2LcPE41giNPgR7HrhmQcJwttp0kY64LN8zu+i5f/oK1E1Vg== ARC-Authentication-Results: i=1; mx1.freebsd.org; none X-ThisMailContainsUnwantedMimeParts: N List-Id: Fallout logs from package building List-Archive: https://lists.freebsd.org/archives/freebsd-pkg-fallout List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-freebsd-pkg-fallout@freebsd.org You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: jwb@FreeBSD.org Log URL: http://ampere3.nyi.freebsd.org/data/130releng-armv7-default/a51002eeb3d0/logs/rna-STAR-2.7.9.a.log Build URL: http://ampere3.nyi.freebsd.org/build.html?mastername=130releng-armv7-default&build=a51002eeb3d0 Log: =>> Building biology/star build started at Sat Jul 23 21:29:19 UTC 2022 port directory: /usr/ports/biology/star package name: rna-STAR-2.7.9.a building for: FreeBSD 130releng-armv7-default-job-09 13.0-RELEASE-p11 FreeBSD 13.0-RELEASE-p11 1300139 arm maintained by: jwb@FreeBSD.org Makefile ident: Poudriere version: 3.2.8-21-g883afb07 Host OSVERSION: 1400063 Jail OSVERSION: 1300139 Job Id: 09 ---Begin Environment--- SHELL=/bin/csh OSVERSION=1300139 UNAME_v=FreeBSD 13.0-RELEASE-p11 1300139 UNAME_r=13.0-RELEASE-p11 BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-21-g883afb07 MASTERMNT=/usr/local/poudriere/data/.m/130releng-armv7-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/130releng-armv7-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=130releng-armv7-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/130releng-armv7-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- jwb@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/star/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/star/work XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/star/work/.cache HOME=/wrkdirs/usr/ports/biology/star/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/star/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/star/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh CMAKE_PREFIX_PATH="/usr/local" --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/biology/star/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/star/work XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/star/work/.cache HOME=/wrkdirs/usr/ports/biology/star/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/star/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/star/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/libdata/pkgconfig NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing " CPP="cpp" CPPFLAGS="-isystem /usr/local/include" LDFLAGS=" -fstack-protector-strong -L/usr/local/lib " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_I NSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- OSREL=13.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/STAR" EXAMPLESDIR="share/examples/STAR" DATADIR="share/STAR" WWWDIR="www/STAR" ETCDIR="etc/STAR" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/STAR DOCSDIR=/usr/local/share/doc/STAR EXAMPLESDIR=/usr/local/share/examples/STAR WWWDIR=/usr/local/www/STAR ETCDIR=/usr/local/etc/STAR --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_921dbbb2=FreeBSD clang version 11.0.1 (git@github.com:llvm/llvm-project.git llvmorg-11.0.1-0-g43ff75f2c3fe) Target: armv7-unknown-freebsd13.0-gnueabihf Thread model: posix InstalledDir: /usr/bin _ALTCCVERSION_921dbbb2=none _CXXINTERNAL_acaad9ca=FreeBSD clang version 11.0.1 (git@github.com:llvm/llvm-project.git llvmorg-11.0.1-0-g43ff75f2c3fe) Target: armv7-unknown-freebsd13.0-gnueabihf Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_921dbbb2_58173849=yes CC_OUTPUT_921dbbb2_9bdba57c=yes CC_OUTPUT_921dbbb2_6a4fe7f5=yes CC_OUTPUT_921dbbb2_6bcac02b=yes CC_OUTPUT_921dbbb2_67d20829=yes CC_OUTPUT_921dbbb2_bfa62e83=yes CC_OUTPUT_921dbbb2_f0b4d593=yes CC_OUTPUT_921dbbb2_308abb44=yes CC_OUTPUT_921dbbb2_f00456e5=yes CC_OUTPUT_921dbbb2_65ad290d=yes CC_OUTPUT_921dbbb2_f2776b26=yes CC_OUTPUT_921dbbb2_b2657cc3=yes CC_OUTPUT_921dbbb2_380987f7=yes CC_OUTPUT_921dbbb2_160933ec=yes CC_OUTPUT_921dbbb2_fb62803b=yes _OBJC_CCVERSION_921dbbb2=FreeBSD clang version 11.0.1 (git@github.com:llvm/llvm-project.git llvmorg-11.0.1-0-g43ff75f2c3fe) Target: armv7-unknown-freebsd13.0-gnueabihf Thread model: posix InstalledDir: /usr/bin _OBJC_ALTCCVERSION_921dbbb2=none ARCH=armv7 OPSYS=FreeBSD _OSRELEASE=13.0-RELEASE-p11 OSREL=13.0 OSVERSION=1300139 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=524288 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 1048576 stack size (kbytes, -s) 1048576 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =================================================== ===> License GPLv3 accepted by the user =========================================================================== =================================================== ===> rna-STAR-2.7.9.a depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.18.3.pkg [130releng-armv7-default-job-09] Installing pkg-1.18.3... [130releng-armv7-default-job-09] Extracting pkg-1.18.3: .......... done ===> rna-STAR-2.7.9.a depends on file: /usr/local/sbin/pkg - found ===> Returning to build of rna-STAR-2.7.9.a =========================================================================== =================================================== =========================================================================== =================================================== ===> License GPLv3 accepted by the user ===> Fetching all distfiles required by rna-STAR-2.7.9.a for building =========================================================================== =================================================== ===> License GPLv3 accepted by the user ===> Fetching all distfiles required by rna-STAR-2.7.9.a for building => SHA256 Checksum OK for alexdobin-STAR-2.7.9a_GH0.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> License GPLv3 accepted by the user ===> Fetching all distfiles required by rna-STAR-2.7.9.a for building ===> Extracting for rna-STAR-2.7.9.a => SHA256 Checksum OK for alexdobin-STAR-2.7.9a_GH0.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Patching for rna-STAR-2.7.9.a ===> Applying FreeBSD patches for rna-STAR-2.7.9.a from /usr/ports/biology/star/files /bin/rm -f -rf /wrkdirs/usr/ports/biology/star/work/STAR-2.7.9a/source/htslib /usr/bin/sed -i.bak -e 's|"htslib/htslib/sam.h"||g' -e 's|"htslib/htslib/kstring.h"||g' -e 's|"htslib/htslib/bgzf.h"||g' /wrkdirs/usr/ports/biology/star/work/STAR-2.7.9a/source/BAMfunctions.cpp /wrkdirs/usr/ports/biology/star/work/STAR-2.7.9a/source/IncludeDefine.h /wrkdirs/usr/ports/biology/star/work/STAR-2.7.9a/source/STAR.cpp /wrkdirs/usr/ports/biology/star/work/STAR-2.7.9a/source/bamRemoveDuplicates.cpp /wrkdirs/usr/ports/biology/star/work/STAR-2.7.9a/source/bam_cat.c /wrkdirs/usr/ports/biology/star/work/STAR-2.7.9a/source/bam_cat.h /wrkdirs/usr/ports/biology/star/work/STAR-2.7.9a/source/signalFromBAM.h =========================================================================== =================================================== ===> rna-STAR-2.7.9.a depends on package: gmake>=4.3 - not found ===> Installing existing package /packages/All/gmake-4.3_2.pkg [130releng-armv7-default-job-09] Installing gmake-4.3_2... [130releng-armv7-default-job-09] `-- Installing gettext-runtime-0.21... [130releng-armv7-default-job-09] | `-- Installing indexinfo-0.3.1... [130releng-armv7-default-job-09] | `-- Extracting indexinfo-0.3.1: .... done [130releng-armv7-default-job-09] `-- Extracting gettext-runtime-0.21: .......... done [130releng-armv7-default-job-09] Extracting gmake-4.3_2: .......... done ===> rna-STAR-2.7.9.a depends on package: gmake>=4.3 - found ===> Returning to build of rna-STAR-2.7.9.a =========================================================================== =================================================== ===> rna-STAR-2.7.9.a depends on shared library: libhts.so - not found ===> Installing existing package /packages/All/htslib-1.15.pkg [130releng-armv7-default-job-09] Installing htslib-1.15... [130releng-armv7-default-job-09] `-- Installing curl-7.84.0... [130releng-armv7-default-job-09] | `-- Installing ca_root_nss-3.80... In file included from Transcriptome_geneFullAlignOverlap.cpp:1: In file included from ./Transcriptome.h:6: ./IncludeDefine.h:24:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from Transcriptome_quantAlign.cpp:1: In file included from ./Transcriptome.h:6: ./IncludeDefine.h:24:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from Variation.cpp:1: In file included from ./Variation.h:4: ./IncludeDefine.h:24:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from bamRemoveDuplicates.cpp:2: In file included from ./bamRemoveDuplicates.h:4: In file included from ./Parameters.h:4: ./IncludeDefine.h:24:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from bamSortByCoordinate.cpp:1: In file included from ./bamSortByCoordinate.h:4: In file included from ./Parameters.h:4: ./IncludeDefine.h:24:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from binarySearch2.cpp:1: In file included from ./binarySearch2.h:4: ./IncludeDefine.h:24:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from blocksOverlap.cpp:1: In file included from ./blocksOverlap.h:4: ./IncludeDefine.h:24:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from extendAlign.cpp:1: ./IncludeDefine.h:24:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from genomeParametersWrite.cpp:1: In file included from ./genomeParametersWrite.h:4: In file included from ./Parameters.h:4: ./IncludeDefine.h:24:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from genomeSAindex.cpp:1: In file included from ./genomeSAindex.h:3: In file included from ./PackedArray.h:4: ./IncludeDefine.h:24:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from genomeScanFastaFiles.cpp:1: In file included from ./genomeScanFastaFiles.h:4: In file included from ./Parameters.h:4: ./IncludeDefine.h:24:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from insertSeqSA.cpp:5: In file included from ./insertSeqSA.h:4: ./IncludeDefine.h:24:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from mapThreadsSpawn.cpp:1: In file included from ./mapThreadsSpawn.h:3: In file included from ./Parameters.h:4: ./IncludeDefine.h:24:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from outputSJ.cpp:1: In file included from ./ReadAlignChunk.h:4: ./IncludeDefine.h:24:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from readLoad.cpp:1: In file included from ./readLoad.h:4: ./IncludeDefine.h:24:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from samHeaders.cpp:1: In file included from ./samHeaders.h:4: In file included from ./Parameters.h:4: ./IncludeDefine.h:24:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from serviceFuns.cpp:4: ./IncludeDefine.h:24:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from signalFromBAM.cpp:1: In file included from ./signalFromBAM.h:6: In file included from ./Stats.h:4: ./IncludeDefine.h:24:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from sjAlignSplit.cpp:1: In file included from ./sjAlignSplit.h:4: ./IncludeDefine.h:24:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from sjdbBuildIndex.cpp:1: In file included from ./sjdbBuildIndex.h:4: In file included from ./Parameters.h:4: ./IncludeDefine.h:24:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from sjdbInsertJunctions.cpp:1: In file included from ./sjdbInsertJunctions.h:4: In file included from ./Parameters.h:4: ./IncludeDefine.h:24:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from sjdbLoadFromFiles.cpp:1: In file included from ./sjdbLoadFromFiles.h:5: In file included from ./SjdbClass.h:4: ./IncludeDefine.h:24:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from sjdbLoadFromStream.cpp:1: In file included from ./sjdbLoadFromStream.h:5: In file included from ./SjdbClass.h:4: ./IncludeDefine.h:24:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from sjdbPrepare.cpp:1: In file included from ./sjdbPrepare.h:4: In file included from ./SjdbClass.h:4: ./IncludeDefine.h:24:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from soloInputFeatureUMI.cpp:1: In file included from ./soloInputFeatureUMI.h:7: ./IncludeDefine.h:24:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from stitchAlignToTranscript.cpp:1: ./IncludeDefine.h:24:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from stitchGapIndel.cpp:1: ./IncludeDefine.h:24:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from stitchWindowAligns.cpp:1: In file included from ./stitchWindowAligns.h:1: ./IncludeDefine.h:24:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from streamFuns.cpp:1: In file included from ./streamFuns.h:4: In file included from ./Parameters.h:4: ./IncludeDefine.h:24:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. In file included from twoPassRunPass1.cpp:1: In file included from ./twoPassRunPass1.h:4: In file included from ./Parameters.h:4: ./IncludeDefine.h:24:10: fatal error: 'omp.h' file not found #include ^~~~~~~ 1 error generated. gmake[1]: *** [Makefile:130: Depend.list] Error 1 gmake[1]: Leaving directory '/wrkdirs/usr/ports/biology/star/work/STAR-2.7.9a/source' ===> Compilation failed unexpectedly. Try to set MAKE_JOBS_UNSAFE=yes and rebuild before reporting the failure to the maintainer. *** Error code 1 Stop. make: stopped in /usr/ports/biology/star