[package - 131arm64-default][science/mdynamix] Failed for mdynamix-5.2.8_4 in build
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Date: Thu, 08 Dec 2022 13:10:29 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: yuri@FreeBSD.org
Log URL: https://pkg-status.freebsd.org/ampere3/data/131arm64-default/3bfbccaa24ce/logs/mdynamix-5.2.8_4.log
Build URL: https://pkg-status.freebsd.org/ampere3/build.html?mastername=131arm64-default&build=3bfbccaa24ce
Log:
=>> Building science/mdynamix
build started at Thu Dec 8 13:09:50 UTC 2022
port directory: /usr/ports/science/mdynamix
package name: mdynamix-5.2.8_4
building for: FreeBSD 131arm64-default-job-09 13.1-RELEASE-p5 FreeBSD 13.1-RELEASE-p5 arm64
maintained by: yuri@FreeBSD.org
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=======================<phase: check-sanity >============================
===> License GPLv2+ accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> mdynamix-5.2.8_4 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.18.4.pkg
[131arm64-default-job-09] Installing pkg-1.18.4...
[131arm64-default-job-09] Extracting pkg-1.18.4: .......... done
===> mdynamix-5.2.8_4 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of mdynamix-5.2.8_4
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License GPLv2+ accepted by the user
===> Fetching all distfiles required by mdynamix-5.2.8_4 for building
===========================================================================
=======================<phase: checksum >============================
===> License GPLv2+ accepted by the user
===> Fetching all distfiles required by mdynamix-5.2.8_4 for building
=> SHA256 Checksum OK for md528.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> License GPLv2+ accepted by the user
===> Fetching all distfiles required by mdynamix-5.2.8_4 for building
===> Extracting for mdynamix-5.2.8_4
=> SHA256 Checksum OK for md528.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for mdynamix-5.2.8_4
===========================================================================
=======================<phase: build-depends >============================
===> mdynamix-5.2.8_4 depends on executable: gfortran12 - not found
===> Installing existing package /packages/All/gcc12-12.2.0_5.pkg
[131arm64-default-job-09] Installing gcc12-12.2.0_5...
[131arm64-default-job-09] `-- Installing binutils-2.39,1...
[131arm64-default-job-09] | `-- Installing gettext-runtime-0.21.1...
[131arm64-default-job-09] | | `-- Installing indexinfo-0.3.1...
[131arm64-default-job-09] | | `-- Extracting indexinfo-0.3.1: .... done
[131arm64-default-job-09] | `-- Extracting gettext-runtime-0.21.1: .......... done
[131arm64-default-job-09] `-- Extracting binutils-2.39,1: .......... done
[131arm64-default-job-09] `-- Installing gmp-6.2.1...
[131arm64-default-job-09] `-- Extracting gmp-6.2.1: .......... done
[131arm64-default-job-09] `-- Installing mpc-1.2.1...
[131arm64-default-job-09] | `-- Installing mpfr-4.1.1...
[131arm64-default-job-09] | `-- Extracting mpfr-4.1.1: .......... done
[131arm64-default-job-09] `-- Extracting mpc-1.2.1: ......... done
[131arm64-default-job-09] Extracting gcc12-12.2.0_5: .......... done
<snip>
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:557:12:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:560:12:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:551:12:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:552:12:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:557:12:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:560:12:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:551:12:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:552:12:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:557:12:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:560:12:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:551:12:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:552:12:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:557:12:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:560:12:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:551:12:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:552:12:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:557:12:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:560:12:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:551:12:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:552:12:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:557:12:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:560:12:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
pimd.f:531:25:
531 | call MPI_ALLREDUCE(BUFF,BUF2,IBUF,MPI_REAL,
| 1
.....
1117 | call MPI_ALLREDUCE(BUFF,BUF2,IBUF,MPI_DOUBLE_PRECISION,
| 2
Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/REAL(8)).
pimd.f:531:30:
531 | call MPI_ALLREDUCE(BUFF,BUF2,IBUF,MPI_REAL,
| 1
.....
1117 | call MPI_ALLREDUCE(BUFF,BUF2,IBUF,MPI_DOUBLE_PRECISION,
| 2
Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/REAL(8)).
gfortran -O -Wl,-rpath=/usr/local/lib/gcc12 -fallow-argument-mismatch -ffast-math -c -o setup.o setup.f
setup.f:965:72:
965 | DO 100 J = 1,NRY
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 100 at (1)
setup.f:966:72:
966 | DO 100 K = 1,NRZ
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 100 at (1)
mpif77 -O -Wl,-rpath=/usr/local/lib/gcc12 -fallow-argument-mismatch -ffast-math -c -o setup.o setup.f
setup.f:965:72:
965 | DO 100 J = 1,NRY
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 100 at (1)
setup.f:966:72:
966 | DO 100 K = 1,NRZ
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 100 at (1)
gfortran -O -Wl,-rpath=/usr/local/lib/gcc12 -fallow-argument-mismatch -ffast-math -c -o util.o util.f
util.f:168:72:
168 | DO 20 J=1,N
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 20 at (1)
util.f:169:72:
169 | 20 A(I,J)=A(I,J)/SCL
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at (1)
util.f:171:72:
171 | DO 30 J=1,N
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 30 at (1)
util.f:177:72:
177 | DO 100 J=1,IU1
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 100 at (1)
util.f:178:72:
178 | 100 TES=TES+2.D0*A(I,J)*A(I,J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 100 at (1)
util.f:185:72:
185 | DO 165 J=1,IUU1
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 165 at (1)
util.f:202:72:
202 | IF(K-I)140,135,135
| 1
Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1)
util.f:207:72:
207 | 140 IF(K-J)145,150,150
| 1
Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1)
util.f:223:72:
223 | IF(M-1)175,170,170
| 1
Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1)
util.f:226:72:
226 | 175 IF(TES-RHO)180,180,105
| 1
Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1)
util.f:228:72:
228 | DO 190 J=1,N
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 190 at (1)
util.f:229:72:
229 | 190 A(I,J)=SCL*A(I,J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 190 at (1)
util.f:478:72:
478 | IF(NDIM-6)5,5,2
| 1
Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1)
util.f:484:72:
484 | IF(I-NDIM)3,6,6
| 1
Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1)
gfortran -Wl,-rpath=/usr/local/lib/gcc12 -L/usr/local/lib/gcc12 -B/usr/local/bin -fstack-protector-strong -o md aver.o cpu_intel.o input.o forces.o main.o mdee.o mdstep.o restart.o scalar.o service.o setup.o util.o
/usr/local/bin/ld: main.o: in function `MAIN__':
main.f:(.text+0x15dc): undefined reference to `iunits_'
/usr/local/bin/ld: main.f:(.text+0x2798): undefined reference to `fcc_'
/usr/local/bin/ld: main.f:(.text+0x2884): undefined reference to `dnasol_'
/usr/local/bin/ld: main.f:(.text+0x288c): undefined reference to `sphole_'
/usr/local/bin/ld: main.f:(.text+0x28e0): undefined reference to `cubic_'
/usr/local/bin/ld: main.f:(.text+0x3d4c): undefined reference to `bndlst_'
/usr/local/bin/ld: main.f:(.text+0x4c08): undefined reference to `pullini_'
collect2: error: ld returned 1 exit status
make[2]: *** [Makefile.gfortran:10: default] Error 1
make[2]: Leaving directory '/wrkdirs/usr/ports/science/mdynamix/work/md528'
gmake[1]: *** [Makefile:2: default] Error 2
gmake[1]: *** Waiting for unfinished jobs....
mpif77 -Wl,-rpath=/usr/local/lib/gcc12 -L/usr/local/lib/gcc12 -B/usr/local/bin -fstack-protector-strong -o mdp aver.o cpu_mpi.o input.o forces.o main.o mdee.o mdstep.o restart.o mpi.o pimd.o service.o setup.o util.o
make[2]: Leaving directory '/wrkdirs/usr/ports/science/mdynamix/work/md528'
gmake[1]: Leaving directory '/wrkdirs/usr/ports/science/mdynamix/work/md528'
===> Compilation failed unexpectedly.
Try to set MAKE_JOBS_UNSAFE=yes and rebuild before reporting the failure to
the maintainer.
*** Error code 1
Stop.
make: stopped in /usr/ports/science/mdynamix