[package - 130amd64-quarterly][science/yoda] Failed for yoda-1.9.4 in package
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Date: Fri, 12 Aug 2022 15:46:48 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: yuri@FreeBSD.org
Log URL: http://beefy14.nyi.freebsd.org/data/130amd64-quarterly/2c413828b4a3/logs/yoda-1.9.4.log
Build URL: http://beefy14.nyi.freebsd.org/build.html?mastername=130amd64-quarterly&build=2c413828b4a3
Log:
=>> Building science/yoda
build started at Fri Aug 12 15:43:35 UTC 2022
port directory: /usr/ports/science/yoda
package name: yoda-1.9.4
building for: FreeBSD 130amd64-quarterly-job-12 13.0-RELEASE-p12 FreeBSD 13.0-RELEASE-p12 amd64
maintained by: yuri@FreeBSD.org
Makefile ident:
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Jail OSVERSION: 1300139
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===> The following configuration options are available for yoda-1.9.4:
PYTHON=on: Python bindings or support
===> Use 'make config' to modify these settings
---End OPTIONS List---
--MAINTAINER--
yuri@FreeBSD.org
--End MAINTAINER--
--CONFIGURE_ARGS--
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--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
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--End CONFIGURE_ENV--
--MAKE_ENV--
PYTHON_VERSION=3.9 PYTHON=/usr/local/bin/python3.9 XDG_DATA_HOME=/wrkdirs/usr/ports/science/yoda/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/yoda/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/yoda/work/.cache HOME=/wrkdirs/usr/ports/science/yoda/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/yoda/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/yoda/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/libdata/pkgconfig NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_I
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--End MAKE_ENV--
--PLIST_SUB--
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--End PLIST_SUB--
--SUB_LIST--
PYTHON="" NO_PYTHON="@comment " PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/yoda DOCSDIR=/usr/local/share/doc/yoda EXAMPLESDIR=/usr/local/share/examples/yoda WWWDIR=/usr/local/www/yoda ETCDIR=/usr/local/etc/yoda
--End SUB_LIST--
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=======================<phase: check-sanity >============================
===> License GPLv3 accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> yoda-1.9.4 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.18.3.pkg
[130amd64-quarterly-job-12] Installing pkg-1.18.3...
[130amd64-quarterly-job-12] Extracting pkg-1.18.3: .......... done
===> yoda-1.9.4 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of yoda-1.9.4
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License GPLv3 accepted by the user
===> Fetching all distfiles required by yoda-1.9.4 for building
===========================================================================
=======================<phase: checksum >============================
===> License GPLv3 accepted by the user
===> Fetching all distfiles required by yoda-1.9.4 for building
=> SHA256 Checksum OK for YODA-1.9.4.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> License GPLv3 accepted by the user
===> Fetching all distfiles required by yoda-1.9.4 for building
===> Extracting for yoda-1.9.4
=> SHA256 Checksum OK for YODA-1.9.4.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for yoda-1.9.4
===========================================================================
=======================<phase: build-depends >============================
===> yoda-1.9.4 depends on package: gmake>=4.3 - not found
===> Installing existing package /packages/All/gmake-4.3_2.pkg
[130amd64-quarterly-job-12] Installing gmake-4.3_2...
[130amd64-quarterly-job-12] `-- Installing gettext-runtime-0.21...
[130amd64-quarterly-job-12] | `-- Installing indexinfo-0.3.1...
[130amd64-quarterly-job-12] | `-- Extracting indexinfo-0.3.1: .... done
[130amd64-quarterly-job-12] `-- Extracting gettext-runtime-0.21: .......... done
[130amd64-quarterly-job-12] Extracting gmake-4.3_2: .......... done
===> yoda-1.9.4 depends on package: gmake>=4.3 - found
===> Returning to build of yoda-1.9.4
===> yoda-1.9.4 depends on executable: cython-3.9 - not found
===> Installing existing package /packages/All/py39-cython-0.29.32.pkg
[130amd64-quarterly-job-12] Installing py39-cython-0.29.32...
[130amd64-quarterly-job-12] `-- Installing py39-setuptools-62.1.0_1...
[130amd64-quarterly-job-12] | `-- Installing python39-3.9.13...
[130amd64-quarterly-job-12] | | `-- Installing libffi-3.4.2...
<snip>
creating /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/lib.freebsd-13.0-RELEASE-p12-amd64-cpython-39/yoda1
copying yoda1/__init__.py -> /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/lib.freebsd-13.0-RELEASE-p12-amd64-cpython-39/yoda1
running build_ext
building 'yoda.util' extension
creating /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/temp.freebsd-13.0-RELEASE-p12-amd64-cpython-39
creating /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/temp.freebsd-13.0-RELEASE-p12-amd64-cpython-39/wrkdirs
creating /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/temp.freebsd-13.0-RELEASE-p12-amd64-cpython-39/wrkdirs/usr
creating /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/temp.freebsd-13.0-RELEASE-p12-amd64-cpython-39/wrkdirs/usr/ports
creating /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/temp.freebsd-13.0-RELEASE-p12-amd64-cpython-39/wrkdirs/usr/ports/science
creating /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/temp.freebsd-13.0-RELEASE-p12-amd64-cpython-39/wrkdirs/usr/ports/science/yoda
creating /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/temp.freebsd-13.0-RELEASE-p12-amd64-cpython-39/wrkdirs/usr/ports/science/yoda/work
creating /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/temp.freebsd-13.0-RELEASE-p12-amd64-cpython-39/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4
creating /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/temp.freebsd-13.0-RELEASE-p12-amd64-cpython-39/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext
creating /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/temp.freebsd-13.0-RELEASE-p12-amd64-cpython-39/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda
c++ -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I/usr/include -I/usr/include -fPIC -I/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/include -I/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/include -I/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda -I/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda -I/usr/local/include/python3.9 -c /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/util.cpp -o /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/temp.freebsd-13.0-RELEASE-p12-amd64-cpython-39/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/util.o -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-sign-compare -Wno-strict-prototypes
c++ -shared -L/usr/local/lib -fstack-protector-strong -fstack-protector-strong -L/usr/lib -L/usr/lib -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I/usr/include -I/usr/include /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/temp.freebsd-13.0-RELEASE-p12-amd64-cpython-39/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/util.o -L/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/src/.libs -L/usr/local/lib -lstdc++ -lYODA -o /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/lib.freebsd-13.0-RELEASE-p12-amd64-cpython-39/yoda/util.cpython-39.so -L/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/src/.libs
building 'yoda.core' extension
creating /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/temp.freebsd-13.0-RELEASE-p12-amd64-cpython-39/yoda
c++ -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I/usr/include -I/usr/include -fPIC -I/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/include -I/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/include -I/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda -I/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda -I/usr/local/include/python3.9 -c /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/core.cpp -o /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/temp.freebsd-13.0-RELEASE-p12-amd64-cpython-39/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/core.o -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-sign-compare -Wno-strict-prototypes
c++ -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I/usr/include -I/usr/include -fPIC -I/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/include -I/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/include -I/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda -I/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda -I/usr/local/include/python3.9 -c yoda/errors.cpp -o /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/temp.freebsd-13.0-RELEASE-p12-amd64-cpython-39/yoda/errors.o -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-sign-compare -Wno-strict-prototypes
c++ -shared -L/usr/local/lib -fstack-protector-strong -fstack-protector-strong -L/usr/lib -L/usr/lib -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I/usr/include -I/usr/include /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/temp.freebsd-13.0-RELEASE-p12-amd64-cpython-39/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/core.o /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/temp.freebsd-13.0-RELEASE-p12-amd64-cpython-39/yoda/errors.o -L/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/src/.libs -L/usr/local/lib -lstdc++ -lYODA -o /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/lib.freebsd-13.0-RELEASE-p12-amd64-cpython-39/yoda/core.cpython-39.so -L/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/src/.libs
gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext'
gmake[2]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext'
gmake[2]: Entering directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4'
gmake[2]: Nothing to be done for 'all-am'.
gmake[2]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4'
gmake[1]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4'
===========================================================================
=======================<phase: run-depends >============================
===========================================================================
=======================<phase: stage >============================
===> Staging for yoda-1.9.4
===> Generating temporary packing list
gmake[1]: Entering directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4'
Making install in src
gmake[2]: Entering directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/src'
Making install in tinyxml
gmake[3]: Entering directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/src/tinyxml'
gmake[4]: Entering directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/src/tinyxml'
gmake[4]: Nothing to be done for 'install-exec-am'.
gmake[4]: Nothing to be done for 'install-data-am'.
gmake[4]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/src/tinyxml'
gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/src/tinyxml'
Making install in yamlcpp
gmake[3]: Entering directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/src/yamlcpp'
gmake[4]: Entering directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/src/yamlcpp'
gmake[4]: Nothing to be done for 'install-exec-am'.
gmake[4]: Nothing to be done for 'install-data-am'.
gmake[4]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/src/yamlcpp'
gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/src/yamlcpp'
Making install in .
gmake[3]: Entering directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/src'
gmake[4]: Entering directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/src'
/bin/mkdir -p '/wrkdirs/usr/ports/science/yoda/work/stage/usr/local/lib'
/bin/sh ../libtool --mode=install /usr/bin/install -c libYODA.la '/wrkdirs/usr/ports/science/yoda/work/stage/usr/local/lib'
libtool: install: /usr/bin/install -c .libs/libYODA.so /wrkdirs/usr/ports/science/yoda/work/stage/usr/local/lib/libYODA.so
libtool: install: /usr/bin/install -c .libs/libYODA.lai /wrkdirs/usr/ports/science/yoda/work/stage/usr/local/lib/libYODA.la
libtool: warning: remember to run 'libtool --finish /usr/local/lib'
gmake[4]: Nothing to be done for 'install-data-am'.
gmake[4]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/src'
gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/src'
gmake[2]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/src'
Making install in include
gmake[2]: Entering directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/include'
Making install in YODA
gmake[3]: Entering directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/include/YODA'
gmake[4]: Entering directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/include/YODA'
gmake[4]: Nothing to be done for 'install-exec-am'.
/bin/mkdir -p '/wrkdirs/usr/ports/science/yoda/work/stage/usr/local/include/YODA'
/bin/mkdir -p '/wrkdirs/usr/ports/science/yoda/work/stage/usr/local/include/YODA/Utils'
install -m 0644 Utils/StringUtils.h Utils/MathUtils.h Utils/Formatting.h Utils/Predicates.h Utils/BinSearcher.h Utils/Traits.h Utils/sortedvector.h Utils/cachedvector.h Utils/indexedset.h Utils/ndarray.h Utils/fastlog.h Utils/getline.h '/wrkdirs/usr/ports/science/yoda/work/stage/usr/local/include/YODA/Utils'
/bin/mkdir -p '/wrkdirs/usr/ports/science/yoda/work/stage/usr/local/include/YODA/Config'
install -m 0644 Config/YodaConfig.h Config/BuildConfig.h '/wrkdirs/usr/ports/science/yoda/work/stage/usr/local/include/YODA/Config'
install -m 0644 ReaderMethods.icc WriterMethods.icc '/wrkdirs/usr/ports/science/yoda/work/stage/usr/local/include/YODA/.'
/bin/mkdir -p '/wrkdirs/usr/ports/science/yoda/work/stage/usr/local/include/YODA'
install -m 0644 Exceptions.h AnalysisObject.h Fillable.h Binned.h Scatter.h Weights.h Bin.h Dbn0D.h Dbn1D.h Dbn2D.h Dbn3D.h Axis1D.h Bin1D.h Axis2D.h Bin2D.h Counter.h Histo1D.h HistoBin1D.h Histo2D.h HistoBin2D.h Profile1D.h ProfileBin1D.h Profile2D.h ProfileBin2D.h Point.h Scatter1D.h Point1D.h Scatter2D.h Point2D.h Scatter3D.h Point3D.h ScatterND.h PointND.h ErrorND.h Index.h Writer.h WriterAIDA.h WriterFLAT.h WriterYODA.h Reader.h '/wrkdirs/usr/ports/science/yoda/work/stage/usr/local/include/YODA'
install -m 0644 ReaderAIDA.h ReaderYODA.h ReaderFLAT.h YODA.h IO.h ROOTCnv.h '/wrkdirs/usr/ports/science/yoda/work/stage/usr/local/include/YODA'
gmake[4]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/include/YODA'
gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/include/YODA'
gmake[3]: Entering directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/include'
gmake[4]: Entering directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/include'
gmake[4]: Nothing to be done for 'install-exec-am'.
gmake[4]: Nothing to be done for 'install-data-am'.
gmake[4]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/include'
gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/include'
gmake[2]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/include'
Making install in tests
gmake[2]: Entering directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/tests'
gmake[3]: Entering directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/tests'
gmake[3]: Nothing to be done for 'install-exec-am'.
gmake[3]: Nothing to be done for 'install-data-am'.
gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/tests'
gmake[2]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/tests'
Making install in bin
gmake[2]: Entering directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/bin'
gmake[3]: Entering directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/bin'
/bin/mkdir -p '/wrkdirs/usr/ports/science/yoda/work/stage/usr/local/bin'
install -m 555 yoda-config yodals yodadiff yodamerge yodastack yodascale yodahist yodacmp yodaplot yodacnv yoda2yoda yoda2flat yoda2aida aida2yoda aida2flat flat2yoda '/wrkdirs/usr/ports/science/yoda/work/stage/usr/local/bin'
/bin/mkdir -p '/wrkdirs/usr/ports/science/yoda/work/stage/usr/local/etc/bash_completion.d'
install -m 0644 yoda-completion '/wrkdirs/usr/ports/science/yoda/work/stage/usr/local/etc/bash_completion.d'
gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/bin'
gmake[2]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/bin'
Making install in pyext
gmake[2]: Entering directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext'
Making install in yoda
gmake[3]: Entering directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda'
gmake install-am
gmake[4]: Entering directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda'
gmake[5]: Entering directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda'
gmake[5]: Nothing to be done for 'install-exec-am'.
gmake[5]: Nothing to be done for 'install-data-am'.
gmake[5]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda'
gmake[4]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda'
gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda'
gmake[3]: Entering directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext'
cd .; \
CC="c++" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-sign-compare -Wno-strict-prototypes" ARCHFLAGS="" YODA_LOCAL=1 /usr/local/bin/python3.9 \
/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/setup.py build \
--build-base /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build \
--verbose \
--force
running build
running build_py
copying yoda/__init__.py -> /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/lib.freebsd-13.0-RELEASE-p12-amd64-cpython-39/yoda
copying yoda/root.py -> /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/lib.freebsd-13.0-RELEASE-p12-amd64-cpython-39/yoda
copying yoda/search.py -> /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/lib.freebsd-13.0-RELEASE-p12-amd64-cpython-39/yoda
copying yoda/plotting.py -> /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/lib.freebsd-13.0-RELEASE-p12-amd64-cpython-39/yoda
copying yoda/script_helpers.py -> /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/lib.freebsd-13.0-RELEASE-p12-amd64-cpython-39/yoda
copying yoda1/__init__.py -> /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/lib.freebsd-13.0-RELEASE-p12-amd64-cpython-39/yoda1
running build_ext
building 'yoda.util' extension
c++ -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I/usr/include -I/usr/include -fPIC -I/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/include -I/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/include -I/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda -I/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda -I/usr/local/include/python3.9 -c /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/util.cpp -o /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/temp.freebsd-13.0-RELEASE-p12-amd64-cpython-39/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/util.o -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-sign-compare -Wno-strict-prototypes
c++ -shared -L/usr/local/lib -fstack-protector-strong -fstack-protector-strong -L/usr/lib -L/usr/lib -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I/usr/include -I/usr/include /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/temp.freebsd-13.0-RELEASE-p12-amd64-cpython-39/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/util.o -L/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/src/.libs -L/usr/local/lib -lstdc++ -lYODA -o /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/lib.freebsd-13.0-RELEASE-p12-amd64-cpython-39/yoda/util.cpython-39.so -L/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/src/.libs
building 'yoda.core' extension
c++ -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I/usr/include -I/usr/include -fPIC -I/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/include -I/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/include -I/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda -I/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda -I/usr/local/include/python3.9 -c /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/core.cpp -o /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/temp.freebsd-13.0-RELEASE-p12-amd64-cpython-39/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/core.o -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-sign-compare -Wno-strict-prototypes
c++ -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I/usr/include -I/usr/include -fPIC -I/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/include -I/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/include -I/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda -I/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda -I/usr/local/include/python3.9 -c yoda/errors.cpp -o /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/temp.freebsd-13.0-RELEASE-p12-amd64-cpython-39/yoda/errors.o -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-sign-compare -Wno-strict-prototypes
c++ -shared -L/usr/local/lib -fstack-protector-strong -fstack-protector-strong -L/usr/lib -L/usr/lib -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I/usr/include -I/usr/include /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/temp.freebsd-13.0-RELEASE-p12-amd64-cpython-39/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/core.o /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/temp.freebsd-13.0-RELEASE-p12-amd64-cpython-39/yoda/errors.o -L/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/src/.libs -L/usr/local/lib -lstdc++ -lYODA -o /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/lib.freebsd-13.0-RELEASE-p12-amd64-cpython-39/yoda/core.cpython-39.so -L/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/src/.libs
gmake[4]: Entering directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext'
CC="c++" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-sign-compare -Wno-strict-prototypes" ARCHFLAGS="" /usr/local/bin/python3.9 \
/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/setup.py install \
--root "/wrkdirs/usr/ports/science/yoda/work/stage///" \
--prefix "/usr/local" \
--verbose \
--skip-build \
--force
running install
/usr/local/lib/python3.9/site-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
warnings.warn(
running install_lib
creating /wrkdirs/usr/ports/science/yoda/work/stage/usr/local/lib/python3.9
creating /wrkdirs/usr/ports/science/yoda/work/stage/usr/local/lib/python3.9/site-packages
creating /wrkdirs/usr/ports/science/yoda/work/stage/usr/local/lib/python3.9/site-packages/yoda
copying build/lib.freebsd-13.0-RELEASE-p12-amd64-cpython-39/yoda/__init__.py -> /wrkdirs/usr/ports/science/yoda/work/stage///usr/local/lib/python3.9/site-packages/yoda
copying build/lib.freebsd-13.0-RELEASE-p12-amd64-cpython-39/yoda/root.py -> /wrkdirs/usr/ports/science/yoda/work/stage///usr/local/lib/python3.9/site-packages/yoda
copying build/lib.freebsd-13.0-RELEASE-p12-amd64-cpython-39/yoda/core.cpython-39.so -> /wrkdirs/usr/ports/science/yoda/work/stage///usr/local/lib/python3.9/site-packages/yoda
copying build/lib.freebsd-13.0-RELEASE-p12-amd64-cpython-39/yoda/search.py -> /wrkdirs/usr/ports/science/yoda/work/stage///usr/local/lib/python3.9/site-packages/yoda
copying build/lib.freebsd-13.0-RELEASE-p12-amd64-cpython-39/yoda/plotting.py -> /wrkdirs/usr/ports/science/yoda/work/stage///usr/local/lib/python3.9/site-packages/yoda
copying build/lib.freebsd-13.0-RELEASE-p12-amd64-cpython-39/yoda/util.cpython-39.so -> /wrkdirs/usr/ports/science/yoda/work/stage///usr/local/lib/python3.9/site-packages/yoda
copying build/lib.freebsd-13.0-RELEASE-p12-amd64-cpython-39/yoda/script_helpers.py -> /wrkdirs/usr/ports/science/yoda/work/stage///usr/local/lib/python3.9/site-packages/yoda
creating /wrkdirs/usr/ports/science/yoda/work/stage/usr/local/lib/python3.9/site-packages/yoda1
copying build/lib.freebsd-13.0-RELEASE-p12-amd64-cpython-39/yoda1/__init__.py -> /wrkdirs/usr/ports/science/yoda/work/stage///usr/local/lib/python3.9/site-packages/yoda1
byte-compiling /wrkdirs/usr/ports/science/yoda/work/stage///usr/local/lib/python3.9/site-packages/yoda/__init__.py to __init__.cpython-39.pyc
byte-compiling /wrkdirs/usr/ports/science/yoda/work/stage///usr/local/lib/python3.9/site-packages/yoda/root.py to root.cpython-39.pyc
byte-compiling /wrkdirs/usr/ports/science/yoda/work/stage///usr/local/lib/python3.9/site-packages/yoda/search.py to search.cpython-39.pyc
byte-compiling /wrkdirs/usr/ports/science/yoda/work/stage///usr/local/lib/python3.9/site-packages/yoda/plotting.py to plotting.cpython-39.pyc
byte-compiling /wrkdirs/usr/ports/science/yoda/work/stage///usr/local/lib/python3.9/site-packages/yoda/script_helpers.py to script_helpers.cpython-39.pyc
byte-compiling /wrkdirs/usr/ports/science/yoda/work/stage///usr/local/lib/python3.9/site-packages/yoda1/__init__.py to __init__.cpython-39.pyc
running install_egg_info
running egg_info
creating yoda.egg-info
writing yoda.egg-info/PKG-INFO
writing dependency_links to yoda.egg-info/dependency_links.txt
writing top-level names to yoda.egg-info/top_level.txt
writing manifest file 'yoda.egg-info/SOURCES.txt'
reading manifest file 'yoda.egg-info/SOURCES.txt'
writing manifest file 'yoda.egg-info/SOURCES.txt'
Copying yoda.egg-info to /wrkdirs/usr/ports/science/yoda/work/stage///usr/local/lib/python3.9/site-packages/yoda-1.9.4-py3.9.egg-info
running install_scripts
gmake[4]: Nothing to be done for 'install-data-am'.
gmake[4]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext'
gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext'
gmake[2]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext'
gmake[2]: Entering directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4'
gmake[3]: Entering directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4'
gmake[3]: Nothing to be done for 'install-exec-am'.
/bin/mkdir -p '/wrkdirs/usr/ports/science/yoda/work/stage/usr/local/lib/pkgconfig'
install -m 0644 yoda.pc '/wrkdirs/usr/ports/science/yoda/work/stage/usr/local/lib/pkgconfig'
gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4'
gmake[2]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4'
gmake[1]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4'
/usr/bin/strip /wrkdirs/usr/ports/science/yoda/work/stage/usr/local/lib/libYODA.so
====> Compressing man pages (compress-man)
===========================================================================
=======================<phase: package >============================
===> Building package for yoda-1.9.4
pkg-static: pkg_checksum_hash_sha256_file(read failed): Is a directory
*** Error code 1
Stop.
make: stopped in /usr/ports/science/yoda