[package - 130releng-armv7-quarterly][math/py-ducc0] Failed for py39-ducc0-0.24.0 in build

From: <pkg-fallout_at_FreeBSD.org>
Date: Sun, 07 Aug 2022 08:54:26 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     yuri@FreeBSD.org
Log URL:        http://ampere1.nyi.freebsd.org/data/130releng-armv7-quarterly/8662e656d870/logs/py39-ducc0-0.24.0.log
Build URL:      http://ampere1.nyi.freebsd.org/build.html?mastername=130releng-armv7-quarterly&build=8662e656d870
Log:

=>> Building math/py-ducc0
build started at Sun Aug  7 08:51:48 UTC 2022
port directory: /usr/ports/math/py-ducc0
package name: py39-ducc0-0.24.0
building for: FreeBSD 130releng-armv7-quarterly-job-03 13.0-RELEASE-p11 FreeBSD 13.0-RELEASE-p11 1300139 arm
maintained by: yuri@FreeBSD.org
Makefile ident: 
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=======================<phase: check-sanity   >============================
===>  License GPLv2 accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   py39-ducc0-0.24.0 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.18.3.pkg
[130releng-armv7-quarterly-job-03] Installing pkg-1.18.3...
[130releng-armv7-quarterly-job-03] Extracting pkg-1.18.3: .......... done
===>   py39-ducc0-0.24.0 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of py39-ducc0-0.24.0
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License GPLv2 accepted by the user
===> Fetching all distfiles required by py39-ducc0-0.24.0 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License GPLv2 accepted by the user
===> Fetching all distfiles required by py39-ducc0-0.24.0 for building
=> SHA256 Checksum OK for ducc0-0.24.0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License GPLv2 accepted by the user
===> Fetching all distfiles required by py39-ducc0-0.24.0 for building
===>  Extracting for py39-ducc0-0.24.0
=> SHA256 Checksum OK for ducc0-0.24.0.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for py39-ducc0-0.24.0
===========================================================================
=======================<phase: build-depends  >============================
===>   py39-ducc0-0.24.0 depends on package: py39-pybind11>0 - not found
===>   Installing existing package /packages/All/py39-pybind11-2.9.2.pkg
[130releng-armv7-quarterly-job-03] Installing py39-pybind11-2.9.2...
[130releng-armv7-quarterly-job-03] `-- Installing py39-setuptools-62.1.0_1...
[130releng-armv7-quarterly-job-03] |   `-- Installing python39-3.9.13...
[130releng-armv7-quarterly-job-03] |   | `-- Installing gettext-runtime-0.21...
[130releng-armv7-quarterly-job-03] |   |   `-- Installing indexinfo-0.3.1...
[130releng-armv7-quarterly-job-03] |   |   `-- Extracting indexinfo-0.3.1: .... done
[130releng-armv7-quarterly-job-03] |   | `-- Extracting gettext-runtime-0.21: .......... done
[130releng-armv7-quarterly-job-03] |   | `-- Installing libffi-3.4.2...
[130releng-armv7-quarterly-job-03] |   | `-- Extracting libffi-3.4.2: .......... done
[130releng-armv7-quarterly-job-03] |   | `-- Installing mpdecimal-2.5.1...
[130releng-armv7-quarterly-job-03] |   | `-- Extracting mpdecimal-2.5.1: .......... done
[130releng-armv7-quarterly-job-03] |   | `-- Installing readline-8.1.2...
[130releng-armv7-quarterly-job-03] |   | `-- Extracting readline-8.1.2: .......... done
[130releng-armv7-quarterly-job-03] |   `-- Extracting python39-3.9.13: .......... done
[130releng-armv7-quarterly-job-03] `-- Extracting py39-setuptools-62.1.0_1: .......... done
[130releng-armv7-quarterly-job-03] Extracting py39-pybind11-2.9.2: .......... done
=====
Message from python39-3.9.13:
<snip>
            ],
            "$$description": [
                "version should be statically defined in the ``version`` field"
            ]
        },
        "definitions": {
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                "$comment": "https://www.python.org/dev/peps/pep-0621/#authors-maintainers",
                "type": "object",
                "properties": {
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            "entry-point-group": {
                "$id": "#/definitions/entry-point-group",
                "title": "Entry-points",
                "type": "object",
                "$$description": [
                    "Entry-points are grouped together to indicate what sort of capabilities they",
                    "provide.",
                    "See the `packaging guides",
                    "<https://packaging.python.org/specifications/entry-points/>`_",
                    "and `setuptools docs",
                    "<https://setuptools.pypa.io/en/latest/userguide/entry_point.html>`_",
                    "for more information."
                ],
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                        ],
                        "format": "python-entrypoint-reference",
                        "$comment": "https://packaging.python.org/specifications/entry-points/"
                    }
                }
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            "dependency": {
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                "title": "Dependency",
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/usr/local/lib/python3.9/site-packages/setuptools/config/pyprojecttoml.py:123: _InvalidFile: !!


    ############################
    # Invalid `pyproject.toml` #
    ############################

    Any configurations in `pyproject.toml` will be ignored.
    Please note that future releases of setuptools will halt the build process
    if an invalid file is given.

    To prevent setuptools from considering `pyproject.toml` please
    DO NOT include the `[project]` or `[tool.setuptools]` tables in your file.
    

!!
    
  if _skip_bad_config(project_table, orig_setuptools_table, dist):
running build
running build_ext
building 'ducc0' extension
creating build
creating build/temp.freebsd-13.0-RELEASE-p11-arm-cpython-39
creating build/temp.freebsd-13.0-RELEASE-p11-arm-cpython-39/python
cc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -DPKGNAME=ducc0 -DPKGVERSION=0.24.0 -I. -I./src/ -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/include/python3.9 -c python/ducc.cc -o build/temp.freebsd-13.0-RELEASE-p11-arm-cpython-39/python/ducc.o -std=c++17 -fvisibility=hidden -g0 -O0 -pthread
In file included from python/ducc.cc:18:
In file included from ./python/nufft_pymod.cc:23:
./src/ducc0/nufft/nufft.h:586:43: warning: shift count >= width of type [-Wshift-count-overflow]
      MR_assert((nu>>logsquare)<(size_t(1)<<32), "nu too large");
                                          ^ ~~
./src/ducc0/infra/error_handling.h:114:9: note: expanded from macro 'MR_assert'
    if (cond); \
        ^~~~
./src/ducc0/nufft/nufft.h:2014:46: note: in instantiation of member function 'ducc0::detail_nufft::Params1d<double, double, double, double, double>::Params1d' requested here
    Params1d<Tcalc, Tacc, Tms, Timg, Tcoord> par(coord, ms_in, ms, dirty, dirty_out,
                                             ^
./python/nufft_pymod.cc:46:3: note: in instantiation of function template specialization 'ducc0::detail_nufft::u2nu<double, double, double, double, double>' requested here
  u2nu<Tgrid,Tgrid>(coord,grid,forward,epsilon,nthreads,out,verbosity,sigma_min,sigma_max);
  ^
./python/nufft_pymod.cc:57:14: note: in instantiation of function template specialization 'ducc0::detail_pymodule_nufft::Py2_u2nu<double, double>' requested here
      return Py2_u2nu<double, double>(grid, coord, forward, epsilon, nthreads, out, verbosity, sigma_min, sigma_max);
             ^
In file included from python/ducc.cc:18:
In file included from ./python/nufft_pymod.cc:23:
./src/ducc0/nufft/nufft.h:586:43: warning: shift count >= width of type [-Wshift-count-overflow]
      MR_assert((nu>>logsquare)<(size_t(1)<<32), "nu too large");
                                          ^ ~~
./src/ducc0/infra/error_handling.h:114:9: note: expanded from macro 'MR_assert'
    if (cond); \
        ^~~~
./src/ducc0/nufft/nufft.h:2014:46: note: in instantiation of member function 'ducc0::detail_nufft::Params1d<float, float, float, float, double>::Params1d' requested here
    Params1d<Tcalc, Tacc, Tms, Timg, Tcoord> par(coord, ms_in, ms, dirty, dirty_out,
                                             ^
./python/nufft_pymod.cc:46:3: note: in instantiation of function template specialization 'ducc0::detail_nufft::u2nu<float, float, float, float, double>' requested here
  u2nu<Tgrid,Tgrid>(coord,grid,forward,epsilon,nthreads,out,verbosity,sigma_min,sigma_max);
  ^
./python/nufft_pymod.cc:59:14: note: in instantiation of function template specialization 'ducc0::detail_pymodule_nufft::Py2_u2nu<float, double>' requested here
      return Py2_u2nu<float, double>(grid, coord, forward, epsilon, nthreads, out, verbosity, sigma_min, sigma_max);
             ^
In file included from python/ducc.cc:18:
In file included from ./python/nufft_pymod.cc:23:
./src/ducc0/nufft/nufft.h:586:43: warning: shift count >= width of type [-Wshift-count-overflow]
      MR_assert((nu>>logsquare)<(size_t(1)<<32), "nu too large");
                                          ^ ~~
./src/ducc0/infra/error_handling.h:114:9: note: expanded from macro 'MR_assert'
    if (cond); \
        ^~~~
./src/ducc0/nufft/nufft.h:2014:46: note: in instantiation of member function 'ducc0::detail_nufft::Params1d<double, double, double, double, float>::Params1d' requested here
    Params1d<Tcalc, Tacc, Tms, Timg, Tcoord> par(coord, ms_in, ms, dirty, dirty_out,
                                             ^
./python/nufft_pymod.cc:46:3: note: in instantiation of function template specialization 'ducc0::detail_nufft::u2nu<double, double, double, double, float>' requested here
  u2nu<Tgrid,Tgrid>(coord,grid,forward,epsilon,nthreads,out,verbosity,sigma_min,sigma_max);
  ^
./python/nufft_pymod.cc:64:14: note: in instantiation of function template specialization 'ducc0::detail_pymodule_nufft::Py2_u2nu<double, float>' requested here
      return Py2_u2nu<double, float>(grid, coord, forward, epsilon, nthreads, out, verbosity, sigma_min, sigma_max);
             ^
In file included from python/ducc.cc:18:
In file included from ./python/nufft_pymod.cc:23:
./src/ducc0/nufft/nufft.h:586:43: warning: shift count >= width of type [-Wshift-count-overflow]
      MR_assert((nu>>logsquare)<(size_t(1)<<32), "nu too large");
                                          ^ ~~
./src/ducc0/infra/error_handling.h:114:9: note: expanded from macro 'MR_assert'
    if (cond); \
        ^~~~
./src/ducc0/nufft/nufft.h:2014:46: note: in instantiation of member function 'ducc0::detail_nufft::Params1d<float, float, float, float, float>::Params1d' requested here
    Params1d<Tcalc, Tacc, Tms, Timg, Tcoord> par(coord, ms_in, ms, dirty, dirty_out,
                                             ^
./python/nufft_pymod.cc:46:3: note: in instantiation of function template specialization 'ducc0::detail_nufft::u2nu<float, float, float, float, float>' requested here
  u2nu<Tgrid,Tgrid>(coord,grid,forward,epsilon,nthreads,out,verbosity,sigma_min,sigma_max);
  ^
./python/nufft_pymod.cc:66:14: note: in instantiation of function template specialization 'ducc0::detail_pymodule_nufft::Py2_u2nu<float, float>' requested here
      return Py2_u2nu<float, float>(grid, coord, forward, epsilon, nthreads, out, verbosity, sigma_min, sigma_max);
             ^
LLVM ERROR: out of memory
PLEASE submit a bug report to https://bugs.freebsd.org/submit/ and include the crash backtrace, preprocessed source, and associated run script.
Stack dump:
0.	Program arguments: /usr/bin/cc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -DPKGNAME=ducc0 -DPKGVERSION=0.24.0 -I. -I./src/ -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/include/python3.9 -c python/ducc.cc -o build/temp.freebsd-13.0-RELEASE-p11-arm-cpython-39/python/ducc.o -std=c++17 -fvisibility=hidden -g0 -O0 -pthread 
1.	<eof> parser at end of file
2.	./python/nufft_pymod.cc:35:53: instantiating function definition 'ducc0::detail_pymodule_nufft::Py2_u2nu<float, float>'
3.	./src/ducc0/nufft/nufft.h:2001:92: instantiating function definition 'ducc0::detail_nufft::u2nu<float, float, float, float, float>'
4.	./src/ducc0/nufft/nufft.h:558:5: instantiating function definition 'ducc0::detail_nufft::Params1d<float, float, float, float, float>::Params1d'
5.	./src/ducc0/nufft/nufft.h:484:10: instantiating function definition 'ducc0::detail_nufft::Params1d<float, float, float, float, float>::dirty2x'
6.	./src/ducc0/infra/mav.h:1047:8: instantiating function definition 'ducc0::detail_mav::mav_apply<(lambda at ./src/ducc0/nufft/nufft.h:489:17), ducc0::detail_mav::vmav<std::__1::complex<float>, 1>>'
7.	./src/ducc0/infra/mav.h:1028:15: instantiating function definition 'ducc0::detail_mav::applyHelper<(lambda at ./src/ducc0/nufft/nufft.h:489:17), std::__1::tuple<std::__1::complex<float> *>>'
8.	/usr/include/c++/v1/functional:2370:5: instantiating function definition 'std::__1::function<void (unsigned int, unsigned int)>::function<(lambda at ./src/ducc0/infra/mav.h:1037:36), void>'
9.	/usr/include/c++/v1/functional:1805:40: instantiating function definition 'std::__1::__function::__value_func<void (unsigned int, unsigned int)>::__value_func<(lambda at ./src/ducc0/infra/mav.h:1037:36), void>'
10.	/usr/include/c++/v1/functional:1775:31: instantiating function definition 'std::__1::__function::__value_func<void (unsigned int, unsigned int)>::__value_func<(lambda at ./src/ducc0/infra/mav.h:1037:36), std::__1::allocator<(lambda at ./src/ducc0/infra/mav.h:1037:36)>>'
11.	/usr/include/c++/v1/functional:1675:14: instantiating function definition 'std::__1::__function::__func<(lambda at ./src/ducc0/infra/mav.h:1037:36), std::__1::allocator<(lambda at ./src/ducc0/infra/mav.h:1037:36)>, void (unsigned int, unsigned int)>::__func'
12.	/usr/include/c++/v1/functional:1679:18: instantiating function definition 'std::__1::__function::__func<(lambda at ./src/ducc0/infra/mav.h:1037:36), std::__1::allocator<(lambda at ./src/ducc0/infra/mav.h:1037:36)>, void (unsigned int, unsigned int)>::__clone'
13.	/usr/include/c++/v1/functional:1667:14: instantiating function definition 'std::__1::__function::__func<(lambda at ./src/ducc0/infra/mav.h:1037:36), std::__1::allocator<(lambda at ./src/ducc0/infra/mav.h:1037:36)>, void (unsigned int, unsigned int)>::__func'
14.	/usr/include/c++/v1/functional:1533:14: instantiating function definition 'std::__1::__function::__alloc_func<(lambda at ./src/ducc0/infra/mav.h:1037:36), std::__1::allocator<(lambda at ./src/ducc0/infra/mav.h:1037:36)>, void (unsigned int, unsigned int)>::__alloc_func'
15.	/usr/include/c++/v1/tuple:1146:1: instantiating function definition 'std::__1::forward_as_tuple<const std::__1::allocator<(lambda at ./src/ducc0/infra/mav.h:1037:36)> &>'
#0 0x0317d090 (/usr/bin/cc+0x317d090)
#1 0x0317b11c (/usr/bin/cc+0x317b11c)
#2 0x0312236c (/usr/bin/cc+0x312236c)
#3 0x443ea040 (/lib/libthr.so.3+0x27040)
cc: error: clang frontend command failed due to signal (use -v to see invocation)
FreeBSD clang version 11.0.1 (git@github.com:llvm/llvm-project.git llvmorg-11.0.1-0-g43ff75f2c3fe)
Target: armv7-unknown-freebsd13.0-gnueabihf
Thread model: posix
InstalledDir: /usr/bin
cc: note: diagnostic msg: 
********************

PLEASE ATTACH THE FOLLOWING FILES TO THE BUG REPORT:
Preprocessed source(s) and associated run script(s) are located at:
cc: note: diagnostic msg: /tmp/ducc-c2b6ed.cpp
cc: note: diagnostic msg: /tmp/ducc-c2b6ed.sh
cc: note: diagnostic msg: 

********************
error: command '/usr/bin/cc' failed with exit code 254
*** Error code 1

Stop.
make: stopped in /usr/ports/math/py-ducc0