[package - 114amd64-default][databases/py-tiledb] Failed for py38-tiledb-0.8.11 in configure

From: <pkg-fallout_at_FreeBSD.org>
Date: Tue, 14 Sep 2021 14:49:05 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     sunpoet@FreeBSD.org
Log URL:        http://beefy9.nyi.freebsd.org/data/114amd64-default/0cb9a1b3d773/logs/py38-tiledb-0.8.11.log
Build URL:      http://beefy9.nyi.freebsd.org/build.html?mastername=114amd64-default&build=0cb9a1b3d773
Log:

=>> Building databases/py-tiledb
build started at Tue Sep 14 14:48:50 UTC 2021
port directory: /usr/ports/databases/py-tiledb
package name: py38-tiledb-0.8.11
building for: FreeBSD 114amd64-default-job-11 11.4-RELEASE-p13 FreeBSD 11.4-RELEASE-p13 amd64
maintained by: sunpoet@FreeBSD.org
Makefile ident: 
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=======================<phase: check-sanity   >============================
===>  License MIT accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   py38-tiledb-0.8.11 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.17.1.pkg
[114amd64-default-job-11] Installing pkg-1.17.1...
[114amd64-default-job-11] Extracting pkg-1.17.1: .......... done
===>   py38-tiledb-0.8.11 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of py38-tiledb-0.8.11
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License MIT accepted by the user
===> Fetching all distfiles required by py38-tiledb-0.8.11 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License MIT accepted by the user
===> Fetching all distfiles required by py38-tiledb-0.8.11 for building
=> SHA256 Checksum OK for tiledb-0.8.11.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License MIT accepted by the user
===> Fetching all distfiles required by py38-tiledb-0.8.11 for building
===>  Extracting for py38-tiledb-0.8.11
=> SHA256 Checksum OK for tiledb-0.8.11.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for py38-tiledb-0.8.11
===>  Applying FreeBSD patches for py38-tiledb-0.8.11 from /usr/ports/databases/py-tiledb/files
===========================================================================
=======================<phase: build-depends  >============================
===>   py38-tiledb-0.8.11 depends on package: py38-cython>=0.27 - not found
===>   Installing existing package /packages/All/py38-cython-0.29.24.pkg
[114amd64-default-job-11] Installing py38-cython-0.29.24...
[114amd64-default-job-11] `-- Installing py38-setuptools-57.0.0...
[114amd64-default-job-11] |   `-- Installing python38-3.8.12...
[114amd64-default-job-11] |   | `-- Installing gettext-runtime-0.21...
[114amd64-default-job-11] |   |   `-- Installing indexinfo-0.3.1...
[114amd64-default-job-11] |   |   `-- Extracting indexinfo-0.3.1: .... done
[114amd64-default-job-11] |   | `-- Extracting gettext-runtime-0.21: .......... done
[114amd64-default-job-11] |   | `-- Installing libffi-3.3_1...
[114amd64-default-job-11] |   | `-- Extracting libffi-3.3_1: .......... done
[114amd64-default-job-11] |   | `-- Installing mpdecimal-2.5.1...
[114amd64-default-job-11] |   | `-- Extracting mpdecimal-2.5.1: .......... done
[114amd64-default-job-11] |   | `-- Installing readline-8.1.1...
[114amd64-default-job-11] |   | `-- Extracting readline-8.1.1: .......... done
[114amd64-default-job-11] |   `-- Extracting python38-3.8.12: .......... done
[114amd64-default-job-11] `-- Extracting py38-setuptools-57.0.0: .......... done
[114amd64-default-job-11] Extracting py38-cython-0.29.24: .......... done
=====
Message from python38-3.8.12:

--
Note that some standard Python modules are provided as separate ports
as they require additional dependencies. They are available as:

py38-gdbm       databases/py-gdbm@py38
py38-sqlite3    databases/py-sqlite3@py38
py38-tkinter    x11-toolkits/py-tkinter@py38
===>   py38-tiledb-0.8.11 depends on package: py38-cython>=0.27 - found
===>   Returning to build of py38-tiledb-0.8.11
===>   py38-tiledb-0.8.11 depends on package: py38-pybind11>=2.6.2 - not found
===>   Installing existing package /packages/All/py38-pybind11-2.7.1.pkg
[114amd64-default-job-11] Installing py38-pybind11-2.7.1...
[114amd64-default-job-11] Extracting py38-pybind11-2.7.1: .......... done
===>   py38-tiledb-0.8.11 depends on package: py38-pybind11>=2.6.2 - found
===>   Returning to build of py38-tiledb-0.8.11
===>   py38-tiledb-0.8.11 depends on package: py38-setuptools_scm>=1.5.4 - not found
===>   Installing existing package /packages/All/py38-setuptools_scm-4.1.2_1.pkg
[114amd64-default-job-11] Installing py38-setuptools_scm-4.1.2_1...
[114amd64-default-job-11] `-- Installing py38-toml-0.10.2...
[114amd64-default-job-11] `-- Extracting py38-toml-0.10.2: .......... done
[114amd64-default-job-11] Extracting py38-setuptools_scm-4.1.2_1: .......... done
===>   py38-tiledb-0.8.11 depends on package: py38-setuptools_scm>=1.5.4 - found
===>   Returning to build of py38-tiledb-0.8.11
===>   py38-tiledb-0.8.11 depends on package: py38-numpy>=1.16,1 - not found
===>   Installing existing package /packages/All/py38-numpy-1.16.6_2,1.pkg
[114amd64-default-job-11] Installing py38-numpy-1.16.6_2,1...
[114amd64-default-job-11] `-- Installing gcc10-10.3.0...
[114amd64-default-job-11] |   `-- Installing binutils-2.37_1,1...
[114amd64-default-job-11] |   `-- Extracting binutils-2.37_1,1: .......... done
[114amd64-default-job-11] |   `-- Installing gmp-6.2.1...
[114amd64-default-job-11] |   `-- Extracting gmp-6.2.1: .......... done
[114amd64-default-job-11] |   `-- Installing mpc-1.2.1...
[114amd64-default-job-11] |   | `-- Installing mpfr-4.1.0_1...
[114amd64-default-job-11] |   | `-- Extracting mpfr-4.1.0_1: .......... done
[114amd64-default-job-11] |   `-- Extracting mpc-1.2.1: ......... done
[114amd64-default-job-11] `-- Extracting gcc10-10.3.0: .......... done
[114amd64-default-job-11] `-- Installing openblas-0.3.16,1...
[114amd64-default-job-11] `-- Extracting openblas-0.3.16,1: .......... done
[114amd64-default-job-11] `-- Installing suitesparse-umfpack-5.7.9...
[114amd64-default-job-11] |   `-- Installing metis-5.1.0_8...
[114amd64-default-job-11] |   `-- Extracting metis-5.1.0_8: .......... done
[114amd64-default-job-11] |   `-- Installing suitesparse-amd-2.4.6...
[114amd64-default-job-11] |   | `-- Installing suitesparse-config-5.10.1...
[114amd64-default-job-11] |   | `-- Extracting suitesparse-config-5.10.1: ......... done
[114amd64-default-job-11] |   `-- Extracting suitesparse-amd-2.4.6: .......... done
[114amd64-default-job-11] |   `-- Installing suitesparse-camd-2.4.6...
[114amd64-default-job-11] |   `-- Extracting suitesparse-camd-2.4.6: ......... done
[114amd64-default-job-11] |   `-- Installing suitesparse-ccolamd-2.9.6...
[114amd64-default-job-11] |   `-- Extracting suitesparse-ccolamd-2.9.6: ........ done
[114amd64-default-job-11] |   `-- Installing suitesparse-cholmod-3.0.14...
[114amd64-default-job-11] |   | `-- Installing suitesparse-colamd-2.9.6...
[114amd64-default-job-11] |   | `-- Extracting suitesparse-colamd-2.9.6: ........ done
[114amd64-default-job-11] |   `-- Extracting suitesparse-cholmod-3.0.14: .......... done
[114amd64-default-job-11] `-- Extracting suitesparse-umfpack-5.7.9: .......... done
[114amd64-default-job-11] Extracting py38-numpy-1.16.6_2,1: .......... done
=====
Message from gcc10-10.3.0:

--
To ensure binaries built with this toolchain find appropriate versions
of the necessary run-time libraries, you may want to link using

  -Wl,-rpath=/usr/local/lib/gcc10

For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
transparently.
=====
Message from metis-5.1.0_8:

--
===>   NOTICE:

The metis port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:

https://bugs.freebsd.org/bugzilla

More information about port maintainership is available at:

https://docs.freebsd.org/en/articles/contributing/#ports-contributing
===>   py38-tiledb-0.8.11 depends on package: py38-numpy>=1.16,1 - found
===>   Returning to build of py38-tiledb-0.8.11
===>   py38-tiledb-0.8.11 depends on package: tiledb>=2.2.8 - not found
===>   Installing existing package /packages/All/tiledb-2.2.9_1.pkg
[114amd64-default-job-11] Installing tiledb-2.2.9_1...
[114amd64-default-job-11] `-- Installing catch-2.13.7...
[114amd64-default-job-11] `-- Extracting catch-2.13.7: .......... done
[114amd64-default-job-11] `-- Installing clipp-1.2.3...
[114amd64-default-job-11] `-- Extracting clipp-1.2.3: .... done
[114amd64-default-job-11] `-- Installing libfmt-8.0.1...
[114amd64-default-job-11] `-- Extracting libfmt-8.0.1: .......... done
[114amd64-default-job-11] `-- Installing liblz4-1.9.3,1...
[114amd64-default-job-11] `-- Extracting liblz4-1.9.3,1: .......... done
[114amd64-default-job-11] `-- Installing spdlog-1.9.2...
[114amd64-default-job-11] `-- Extracting spdlog-1.9.2: .......... done
[114amd64-default-job-11] `-- Installing zstd-1.5.0...
[114amd64-default-job-11] `-- Extracting zstd-1.5.0: .......... done
[114amd64-default-job-11] Extracting tiledb-2.2.9_1: .......... done
===>   py38-tiledb-0.8.11 depends on package: tiledb>=2.2.8 - found
===>   Returning to build of py38-tiledb-0.8.11
===>   py38-tiledb-0.8.11 depends on executable: cython-3.8 - found
===>   py38-tiledb-0.8.11 depends on package: py38-setuptools>0 - found
===>   py38-tiledb-0.8.11 depends on file: /usr/local/bin/python3.8 - found
===========================================================================
=======================<phase: lib-depends    >============================
===>   py38-tiledb-0.8.11 depends on shared library: libtiledb.so - found (/usr/local/lib/libtiledb.so)
===========================================================================
=======================<phase: configure      >============================
===>  Configuring for py38-tiledb-0.8.11
*** Signal 4

Stop.
make: stopped in /usr/ports/databases/py-tiledb