[package - 122i386-quarterly][misc/xgboost] Failed for xgboost-1.4.1 in build
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Date: Sat, 11 Sep 2021 01:08:27 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: yuri@FreeBSD.org
Log URL: http://beefy4.nyi.freebsd.org/data/122i386-quarterly/aa53837c166a/logs/xgboost-1.4.1.log
Build URL: http://beefy4.nyi.freebsd.org/build.html?mastername=122i386-quarterly&build=aa53837c166a
Log:
=>> Building misc/xgboost
build started at Sat Sep 11 01:07:50 UTC 2021
port directory: /usr/ports/misc/xgboost
package name: xgboost-1.4.1
building for: FreeBSD 122i386-quarterly-job-06 12.2-RELEASE-p10 FreeBSD 12.2-RELEASE-p10 i386
maintained by: yuri@FreeBSD.org
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yuri@FreeBSD.org
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=======================<phase: check-sanity >============================
===> License APACHE20 accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> xgboost-1.4.1 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.16.3.txz
[122i386-quarterly-job-06] Installing pkg-1.16.3...
[122i386-quarterly-job-06] Extracting pkg-1.16.3: .......... done
===> xgboost-1.4.1 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of xgboost-1.4.1
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License APACHE20 accepted by the user
===> Fetching all distfiles required by xgboost-1.4.1 for building
===========================================================================
=======================<phase: checksum >============================
===> License APACHE20 accepted by the user
===> Fetching all distfiles required by xgboost-1.4.1 for building
=> SHA256 Checksum OK for dmlc-xgboost-v1.4.1_GH0.tar.gz.
=> SHA256 Checksum OK for NVlabs-cub-af39ee2_GH0.tar.gz.
=> SHA256 Checksum OK for rapidsai-gputreeshap-3310a30_GH0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> License APACHE20 accepted by the user
===> Fetching all distfiles required by xgboost-1.4.1 for building
===> Extracting for xgboost-1.4.1
=> SHA256 Checksum OK for dmlc-xgboost-v1.4.1_GH0.tar.gz.
=> SHA256 Checksum OK for NVlabs-cub-af39ee2_GH0.tar.gz.
=> SHA256 Checksum OK for rapidsai-gputreeshap-3310a30_GH0.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for xgboost-1.4.1
===> Applying FreeBSD patches for xgboost-1.4.1 from /usr/ports/misc/xgboost/files
===========================================================================
=======================<phase: build-depends >============================
===> xgboost-1.4.1 depends on file: /usr/local/bin/cmake - not found
===> Installing existing package /packages/All/cmake-3.20.4.txz
[122i386-quarterly-job-06] Installing cmake-3.20.4...
[122i386-quarterly-job-06] `-- Installing curl-7.78.0...
[122i386-quarterly-job-06] | `-- Installing ca_root_nss-3.63...
[122i386-quarterly-job-06] | `-- Extracting ca_root_nss-3.63: ........ done
[122i386-quarterly-job-06] | `-- Installing libnghttp2-1.43.0...
[122i386-quarterly-job-06] | `-- Extracting libnghttp2-1.43.0: .......... done
[122i386-quarterly-job-06] `-- Extracting curl-7.78.0: .......... done
[122i386-quarterly-job-06] `-- Installing expat-2.4.1...
[122i386-quarterly-job-06] `-- Extracting expat-2.4.1: .......... done
[122i386-quarterly-job-06] `-- Installing jsoncpp-1.9.4...
[122i386-quarterly-job-06] `-- Extracting jsoncpp-1.9.4: .......... done
[122i386-quarterly-job-06] `-- Installing libarchive-3.5.1,1...
[122i386-quarterly-job-06] | `-- Installing liblz4-1.9.3,1...
[122i386-quarterly-job-06] | `-- Extracting liblz4-1.9.3,1: .......... done
[122i386-quarterly-job-06] `-- Extracting libarchive-3.5.1,1: .......... done
[122i386-quarterly-job-06] `-- Installing libuv-1.41.0...
[122i386-quarterly-job-06] `-- Extracting libuv-1.41.0: .......... done
[122i386-quarterly-job-06] `-- Installing rhash-1.4.1...
[122i386-quarterly-job-06] | `-- Installing gettext-runtime-0.21...
[122i386-quarterly-job-06] | | `-- Installing indexinfo-0.3.1...
[122i386-quarterly-job-06] | | `-- Extracting indexinfo-0.3.1: .... done
[122i386-quarterly-job-06] | `-- Extracting gettext-runtime-0.21: .......... done
[122i386-quarterly-job-06] `-- Extracting rhash-1.4.1: .......... done
[122i386-quarterly-job-06] Extracting cmake-3.20.4: .......... done
=====
Message from ca_root_nss-3.63:
--
FreeBSD does not, and can not warrant that the certification authorities
whose certificates are included in this package have in any way been
audited for trustworthiness or RFC 3647 compliance.
Assessment and verification of trust is the complete responsibility of the
system administrator.
This package installs symlinks to support root certificates discovery by
default for software that uses OpenSSL.
This enables SSL Certificate Verification by client software without manual
intervention.
If you prefer to do this manually, replace the following symlinks with
either an empty file or your site-local certificate bundle.
* /etc/ssl/cert.pem
* /usr/local/etc/ssl/cert.pem
* /usr/local/openssl/cert.pem
===> xgboost-1.4.1 depends on file: /usr/local/bin/cmake - found
===> Returning to build of xgboost-1.4.1
===> xgboost-1.4.1 depends on executable: ninja - not found
===> Installing existing package /packages/All/ninja-1.10.2,2.txz
[122i386-quarterly-job-06] Installing ninja-1.10.2,2...
[122i386-quarterly-job-06] `-- Installing python38-3.8.10...
[122i386-quarterly-job-06] | `-- Installing libffi-3.3_1...
[122i386-quarterly-job-06] | `-- Extracting libffi-3.3_1: .......... done
[122i386-quarterly-job-06] | `-- Installing mpdecimal-2.5.1...
[122i386-quarterly-job-06] | `-- Extracting mpdecimal-2.5.1: .......... done
[122i386-quarterly-job-06] | `-- Installing readline-8.1.1...
[122i386-quarterly-job-06] | `-- Extracting readline-8.1.1: .......... done
[122i386-quarterly-job-06] `-- Extracting python38-3.8.10: .......... done
[122i386-quarterly-job-06] Extracting ninja-1.10.2,2: ........ done
=====
Message from python38-3.8.10:
--
Note that some standard Python modules are provided as separate ports
as they require additional dependencies. They are available as:
py38-gdbm databases/py-gdbm@py38
py38-sqlite3 databases/py-sqlite3@py38
py38-tkinter x11-toolkits/py-tkinter@py38
===> xgboost-1.4.1 depends on executable: ninja - found
===> Returning to build of xgboost-1.4.1
===========================================================================
=======================<phase: lib-depends >============================
===> xgboost-1.4.1 depends on shared library: libdmlc.so - not found
===> Installing existing package /packages/All/dmlc-core-0.3.123.txz
[122i386-quarterly-job-06] Installing dmlc-core-0.3.123...
[122i386-quarterly-job-06] Extracting dmlc-core-0.3.123: .......... done
===> xgboost-1.4.1 depends on shared library: libdmlc.so - found (/usr/local/lib/libdmlc.so)
===> Returning to build of xgboost-1.4.1
===========================================================================
=======================<phase: configure >============================
===> Configuring for xgboost-1.4.1
===> Performing out-of-source build
/bin/mkdir -p /wrkdirs/usr/ports/misc/xgboost/work/.build
-- The CXX compiler identification is Clang 10.0.1
-- The C compiler identification is Clang 10.0.1
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- CMake version 3.20.4
-- Performing Test XGBOOST_MM_PREFETCH_PRESENT
-- Performing Test XGBOOST_MM_PREFETCH_PRESENT - Success
-- Performing Test XGBOOST_BUILTIN_PREFETCH_PRESENT
-- Performing Test XGBOOST_BUILTIN_PREFETCH_PRESENT - Success
-- xgboost VERSION: 1.4.1
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Found Threads: TRUE
-- Configuring done
-- Generating done
CMake Warning:
Manually-specified variables were not used by the project:
CMAKE_COLOR_MAKEFILE
CMAKE_C_FLAGS_RELEASE
CMAKE_MODULE_LINKER_FLAGS
CMAKE_VERBOSE_MAKEFILE
-- Build files have been written to: /wrkdirs/usr/ports/misc/xgboost/work/.build
===========================================================================
=======================<phase: build >============================
===> Building for xgboost-1.4.1
[ 1% 1/61] /usr/bin/c++ -I/wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/include -I/wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/dmlc-core/include -I/wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/rabit/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -pthread -std=gnu++14 -MD -MT CMakeFiles/runxgboost.dir/src/cli_main.cc.o -MF CMakeFiles/runxgboost.dir/src/cli_main.cc.o.d -o CMakeFiles/runxgboost.dir/src/cli_main.cc.o -c /wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/src/cli_main.cc
[ 3% 2/61] /usr/bin/c++ -DDMLC_LOG_CUSTOMIZE=1 -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -D_MWAITXINTRIN_H_INCLUDED -I/wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/include -I/wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/dmlc-core/include -I/wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/rabit/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -funroll-loops -pthread -std=gnu++14 -MD -MT src/CMakeFiles/objxgboost.dir/common/charconv.cc.o -MF src/CMakeFiles/objxgboost.dir/common/charconv.cc.o.d -o src/CMakeFiles/objxgboost.dir/common/charconv.cc.o -c /wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/src/common/charconv.cc
[ 4% 3/61] /usr/bin/c++ -DDMLC_LOG_CUSTOMIZE=1 -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -D_MWAITXINTRIN_H_INCLUDED -I/wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/include -I/wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/dmlc-core/include -I/wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/rabit/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -funroll-loops -pthread -std=gnu++14 -MD -MT src/CMakeFiles/objxgboost.dir/c_api/c_api.cc.o -MF src/CMakeFiles/objxgboost.dir/c_api/c_api.cc.o.d -o src/CMakeFiles/objxgboost.dir/c_api/c_api.cc.o -c /wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/src/c_api/c_api.cc
FAILED: src/CMakeFiles/objxgboost.dir/c_api/c_api.cc.o
/usr/bin/c++ -DDMLC_LOG_CUSTOMIZE=1 -DXGBOOST_BUILTIN_PREFETCH_PRESENT=1 -DXGBOOST_MM_PREFETCH_PRESENT=1 -D_MWAITXINTRIN_H_INCLUDED -I/wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/include -I/wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/dmlc-core/include -I/wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/rabit/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -funroll-loops -pthread -std=gnu++14 -MD -MT src/CMakeFiles/objxgboost.dir/c_api/c_api.cc.o -MF src/CMakeFiles/objxgboost.dir/c_api/c_api.cc.o.d -o src/CMakeFiles/objxgboost.dir/c_api/c_api.cc.o -c /wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/src/c_api/c_api.cc
/wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/src/c_api/c_api.cc:738:70: error: non-constant-expression cannot be narrowed from type 'xgboost::bst_ulong' (aka 'unsigned long long') to 'size_t' (aka 'unsigned int') in initializer list [-Wc++11-narrowing]
StringView{indptr}, StringView{indices}, StringView{data}, cols}};
^~~~
/wrkdirs/usr/ports/misc/xgboost/work/xgboost-1.4.1/src/c_api/c_api.cc:738:70: note: insert an explicit cast to silence this issue
StringView{indptr}, StringView{indices}, StringView{data}, cols}};
^~~~
static_cast<size_t>( )
1 error generated.
ninja: build stopped: subcommand failed.
*** Error code 1
Stop.
make: stopped in /usr/ports/misc/xgboost