[package - 130releng-armv7-quarterly][science/nest] Failed for nest-2.20.1_1 in configure
- Go to: [ bottom of page ] [ top of archives ] [ this month ]
Date: Sun, 05 Sep 2021 13:52:42 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: yuri@FreeBSD.org
Log URL: http://beefy12.nyi.freebsd.org/data/130releng-armv7-quarterly/d8c210d2774e/logs/nest-2.20.1_1.log
Build URL: http://beefy12.nyi.freebsd.org/build.html?mastername=130releng-armv7-quarterly&build=d8c210d2774e
Log:
=>> Building science/nest
build started at Sun Sep 5 13:51:33 UTC 2021
port directory: /usr/ports/science/nest
package name: nest-2.20.1_1
building for: FreeBSD 130releng-armv7-quarterly-job-11 13.0-RELEASE-p4 FreeBSD 13.0-RELEASE-p4 1300139 arm
maintained by: yuri@FreeBSD.org
Makefile ident:
Poudriere version: 3.2.8-21-g883afb07
Host OSVERSION: 1400003
Jail OSVERSION: 1300139
Job Id: 11
---Begin Environment---
SHELL=/bin/csh
UNAME_p=armv7
UNAME_m=arm
ABI_FILE=/usr/lib/crt1.o
OSVERSION=1300139
UNAME_v=FreeBSD 13.0-RELEASE-p4 1300139
UNAME_r=13.0-RELEASE-p4
BLOCKSIZE=K
MAIL=/var/mail/root
MM_CHARSET=UTF-8
LANG=C.UTF-8
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
QEMU_EMULATING=1
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-21-g883afb07
MASTERMNT=/usr/local/poudriere/data/.m/130releng-armv7-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/130releng-armv7-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=130releng-armv7-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/130releng-armv7-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---
---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---
---Begin OPTIONS List---
===> The following configuration options are available for nest-2.20.1_1:
DOCS=on: Build and/or install documentation
PYTHON=on: Python bindings or support
===> Use 'make config' to modify these settings
---End OPTIONS List---
--MAINTAINER--
yuri@FreeBSD.org
--End MAINTAINER--
--CONFIGURE_ARGS--
--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
PKG_CONFIG=pkgconf PYTHON="/usr/local/bin/python3.8" XDG_DATA_HOME=/wrkdirs/usr/ports/science/nest/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/nest/work HOME=/wrkdirs/usr/ports/science/nest/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/nest/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--
--MAKE_ENV--
NINJA_STATUS="[%p %s/%t] " XDG_DATA_HOME=/wrkdirs/usr/ports/science/nest/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/nest/work HOME=/wrkdirs/usr/ports/science/nest/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/nest/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES DESTDIR=/wrkdirs/usr/ports/science/nest/work/stage PREFIX=/usr/local LOCALBASE=/usr/local CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS="-I/usr/local/include" LDFLAGS=" -L/usr/local/lib -fstack-protector-strong " LIBS="" CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 44
4"
--End MAKE_ENV--
--PLIST_SUB--
PORTDOCS="" DOCS="" NO_DOCS="@comment " PYTHON="" NO_PYTHON="@comment " CMAKE_BUILD_TYPE="release" PYTHON_INCLUDEDIR=include/python3.8 PYTHON_LIBDIR=lib/python3.8 PYTHON_PLATFORM=freebsd13 PYTHON_SITELIBDIR=lib/python3.8/site-packages PYTHON_SUFFIX=38 PYTHON_EXT_SUFFIX=.cpython-38 PYTHON_VER=3.8 PYTHON_VERSION=python3.8 PYTHON2="@comment " PYTHON3="" OSREL=13.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/nest" EXAMPLESDIR="share/examples/nest" DATADIR="share/nest" WWWDIR="www/nest" ETCDIR="etc/nest"
--End PLIST_SUB--
--SUB_LIST--
DOCS="" NO_DOCS="@comment " PYTHON="" NO_PYTHON="@comment " PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/nest DOCSDIR=/usr/local/share/doc/nest EXAMPLESDIR=/usr/local/share/examples/nest WWWDIR=/usr/local/www/nest ETCDIR=/usr/local/etc/nest
--End SUB_LIST--
---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=arm
MACHINE_ARCH=armv7
ARCH=${MACHINE_ARCH}
#### /usr/local/etc/poudriere.d/make.conf ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure. It currently retries the same
# failed mirror and then fails rather then trying another. It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
#### /usr/ports/Mk/Scripts/ports_env.sh ####
_CCVERSION_9d218390=FreeBSD clang version 11.0.1 (git@github.com:llvm/llvm-project.git llvmorg-11.0.1-0-g43ff75f2c3fe) Target: armv7-unknown-freebsd13.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin
_ALTCCVERSION_9d218390=none
_CXXINTERNAL_9c45a5b1=FreeBSD clang version 11.0.1 (git@github.com:llvm/llvm-project.git llvmorg-11.0.1-0-g43ff75f2c3fe) Target: armv7-unknown-freebsd13.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin "/nxb-bin/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o"
CC_OUTPUT_9d218390_58173849=yes
CC_OUTPUT_9d218390_9bdba57c=yes
CC_OUTPUT_9d218390_6a4fe7f5=yes
CC_OUTPUT_9d218390_6bcac02b=yes
CC_OUTPUT_9d218390_67d20829=yes
CC_OUTPUT_9d218390_bfa62e83=yes
CC_OUTPUT_9d218390_f0b4d593=yes
CC_OUTPUT_9d218390_308abb44=yes
CC_OUTPUT_9d218390_f00456e5=yes
CC_OUTPUT_9d218390_65ad290d=yes
CC_OUTPUT_9d218390_f2776b26=yes
CC_OUTPUT_9d218390_b2657cc3=yes
CC_OUTPUT_9d218390_380987f7=yes
CC_OUTPUT_9d218390_160933ec=yes
CC_OUTPUT_9d218390_fb62803b=yes
_OBJC_CCVERSION_9d218390=FreeBSD clang version 11.0.1 (git@github.com:llvm/llvm-project.git llvmorg-11.0.1-0-g43ff75f2c3fe) Target: armv7-unknown-freebsd13.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin
_OBJC_ALTCCVERSION_9d218390=none
ARCH=armv7
OPSYS=FreeBSD
_OSRELEASE=13.0-RELEASE-p4
OSREL=13.0
OSVERSION=1300139
PYTHONBASE=/usr/local
CONFIGURE_MAX_CMD_LEN=524288
HAVE_PORTS_ENV=1
#### Misc Poudriere ####
GID=0
UID=0
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
---Begin make.nxb.conf---
CC=/nxb-bin/usr/bin/cc
CPP=/nxb-bin/usr/bin/cpp
CXX=/nxb-bin/usr/bin/c++
NM=/nxb-bin/usr/bin/nm
LD=/nxb-bin/usr/bin/ld
OBJCOPY=/nxb-bin/usr/bin/objcopy
SIZE=/nxb-bin/usr/bin/size
STRIPBIN=/nxb-bin/usr/bin/strip
SED=/nxb-bin/usr/bin/sed
RANLIB=/nxb-bin/usr/bin/ranlib
YACC=/nxb-bin/usr/bin/yacc
MAKE=/nxb-bin/usr/bin/make
STRINGS=/nxb-bin/usr/bin/strings
AWK=/nxb-bin/usr/bin/awk
FLEX=/nxb-bin/usr/bin/flex
---End make.nxb.conf---
--Resource limits--
cpu time (seconds, -t) unlimited
file size (512-blocks, -f) unlimited
data seg size (kbytes, -d) 33554432
stack size (kbytes, -s) 524288
core file size (512-blocks, -c) unlimited
max memory size (kbytes, -m) unlimited
locked memory (kbytes, -l) unlimited
max user processes (-u) 89999
open files (-n) 1024
virtual mem size (kbytes, -v) unlimited
swap limit (kbytes, -w) unlimited
socket buffer size (bytes, -b) unlimited
pseudo-terminals (-p) unlimited
kqueues (-k) unlimited
umtx shared locks (-o) unlimited
--End resource limits--
=======================<phase: check-sanity >============================
===> License GPLv2 accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> nest-2.20.1_1 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.16.3.txz
[130releng-armv7-quarterly-job-11] Installing pkg-1.16.3...
[130releng-armv7-quarterly-job-11] Extracting pkg-1.16.3: .......... done
===> nest-2.20.1_1 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of nest-2.20.1_1
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License GPLv2 accepted by the user
===> Fetching all distfiles required by nest-2.20.1_1 for building
===========================================================================
=======================<phase: checksum >============================
===> License GPLv2 accepted by the user
===> Fetching all distfiles required by nest-2.20.1_1 for building
=> SHA256 Checksum OK for nest-nest-simulator-v2.20.1_GH0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> License GPLv2 accepted by the user
<snip>
=> SHA256 Checksum OK for nest-nest-simulator-v2.20.1_GH0.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for nest-2.20.1_1
===> Applying FreeBSD patches for nest-2.20.1_1 from /usr/ports/science/nest/files
===========================================================================
=======================<phase: build-depends >============================
===> nest-2.20.1_1 depends on file: /usr/local/bin/cmake - not found
===> Installing existing package /packages/All/cmake-3.20.4.txz
[130releng-armv7-quarterly-job-11] Installing cmake-3.20.4...
[130releng-armv7-quarterly-job-11] `-- Installing curl-7.78.0...
[130releng-armv7-quarterly-job-11] | `-- Installing ca_root_nss-3.63...
[130releng-armv7-quarterly-job-11] | `-- Extracting ca_root_nss-3.63: ........ done
[130releng-armv7-quarterly-job-11] | `-- Installing libnghttp2-1.43.0...
[130releng-armv7-quarterly-job-11] | `-- Extracting libnghttp2-1.43.0: .......... done
[130releng-armv7-quarterly-job-11] `-- Extracting curl-7.78.0: .......... done
[130releng-armv7-quarterly-job-11] `-- Installing expat-2.4.1...
[130releng-armv7-quarterly-job-11] `-- Extracting expat-2.4.1: .......... done
[130releng-armv7-quarterly-job-11] `-- Installing jsoncpp-1.9.4...
[130releng-armv7-quarterly-job-11] `-- Extracting jsoncpp-1.9.4: .......... done
[130releng-armv7-quarterly-job-11] `-- Installing libarchive-3.5.1,1...
[130releng-armv7-quarterly-job-11] | `-- Installing liblz4-1.9.3,1...
[130releng-armv7-quarterly-job-11] | `-- Extracting liblz4-1.9.3,1: .......... done
[130releng-armv7-quarterly-job-11] `-- Extracting libarchive-3.5.1,1: .......... done
[130releng-armv7-quarterly-job-11] `-- Installing libuv-1.41.0...
[130releng-armv7-quarterly-job-11] `-- Extracting libuv-1.41.0: .......... done
[130releng-armv7-quarterly-job-11] `-- Installing rhash-1.4.1...
[130releng-armv7-quarterly-job-11] | `-- Installing gettext-runtime-0.21...
[130releng-armv7-quarterly-job-11] | | `-- Installing indexinfo-0.3.1...
[130releng-armv7-quarterly-job-11] | | `-- Extracting indexinfo-0.3.1: .... done
[130releng-armv7-quarterly-job-11] | `-- Extracting gettext-runtime-0.21: .......... done
[130releng-armv7-quarterly-job-11] `-- Extracting rhash-1.4.1: .......... done
[130releng-armv7-quarterly-job-11] Extracting cmake-3.20.4: .......... done
=====
Message from ca_root_nss-3.63:
--
FreeBSD does not, and can not warrant that the certification authorities
whose certificates are included in this package have in any way been
audited for trustworthiness or RFC 3647 compliance.
Assessment and verification of trust is the complete responsibility of the
system administrator.
This package installs symlinks to support root certificates discovery by
default for software that uses OpenSSL.
This enables SSL Certificate Verification by client software without manual
intervention.
If you prefer to do this manually, replace the following symlinks with
either an empty file or your site-local certificate bundle.
* /etc/ssl/cert.pem
* /usr/local/etc/ssl/cert.pem
* /usr/local/openssl/cert.pem
===> nest-2.20.1_1 depends on file: /usr/local/bin/cmake - found
===> Returning to build of nest-2.20.1_1
===> nest-2.20.1_1 depends on executable: ninja - not found
===> Installing existing package /packages/All/ninja-1.10.2,2.txz
[130releng-armv7-quarterly-job-11] Installing ninja-1.10.2,2...
[130releng-armv7-quarterly-job-11] `-- Installing python38-3.8.10...
[130releng-armv7-quarterly-job-11] | `-- Installing libffi-3.3_1...
[130releng-armv7-quarterly-job-11] | `-- Extracting libffi-3.3_1: .......... done
[130releng-armv7-quarterly-job-11] | `-- Installing mpdecimal-2.5.1...
[130releng-armv7-quarterly-job-11] | `-- Extracting mpdecimal-2.5.1: .......... done
[130releng-armv7-quarterly-job-11] | `-- Installing readline-8.1.1...
[130releng-armv7-quarterly-job-11] | `-- Extracting readline-8.1.1: .......... done
[130releng-armv7-quarterly-job-11] `-- Extracting python38-3.8.10: .......... done
[130releng-armv7-quarterly-job-11] Extracting ninja-1.10.2,2: ........ done
=====
Message from python38-3.8.10:
--
Note that some standard Python modules are provided as separate ports
as they require additional dependencies. They are available as:
py38-gdbm databases/py-gdbm@py38
py38-sqlite3 databases/py-sqlite3@py38
py38-tkinter x11-toolkits/py-tkinter@py38
===> nest-2.20.1_1 depends on executable: ninja - found
===> Returning to build of nest-2.20.1_1
===> nest-2.20.1_1 depends on package: pkgconf>=1.3.0_1 - not found
===> Installing existing package /packages/All/pkgconf-1.7.4,1.txz
[130releng-armv7-quarterly-job-11] Installing pkgconf-1.7.4,1...
[130releng-armv7-quarterly-job-11] Extracting pkgconf-1.7.4,1: .......... done
===> nest-2.20.1_1 depends on package: pkgconf>=1.3.0_1 - found
===> Returning to build of nest-2.20.1_1
===> nest-2.20.1_1 depends on executable: cython-3.8 - not found
===> Installing existing package /packages/All/py38-cython-0.29.23.txz
[130releng-armv7-quarterly-job-11] Installing py38-cython-0.29.23...
[130releng-armv7-quarterly-job-11] `-- Installing py38-setuptools-57.0.0...
[130releng-armv7-quarterly-job-11] `-- Extracting py38-setuptools-57.0.0: .......... done
[130releng-armv7-quarterly-job-11] Extracting py38-cython-0.29.23: .......... done
===> nest-2.20.1_1 depends on executable: cython-3.8 - found
===> Returning to build of nest-2.20.1_1
===> nest-2.20.1_1 depends on file: /usr/local/bin/python3.8 - found
===========================================================================
=======================<phase: lib-depends >============================
===> nest-2.20.1_1 depends on shared library: libgsl.so - not found
===> Installing existing package /packages/All/gsl-2.7.txz
[130releng-armv7-quarterly-job-11] Installing gsl-2.7...
[130releng-armv7-quarterly-job-11] Extracting gsl-2.7: .......... done
===> nest-2.20.1_1 depends on shared library: libgsl.so - found (/usr/local/lib/libgsl.so)
===> Returning to build of nest-2.20.1_1
===> nest-2.20.1_1 depends on shared library: libltdl.so - not found
===> Installing existing package /packages/All/libltdl-2.4.6.txz
[130releng-armv7-quarterly-job-11] Installing libltdl-2.4.6...
[130releng-armv7-quarterly-job-11] Extracting libltdl-2.4.6: .......... done
===> nest-2.20.1_1 depends on shared library: libltdl.so - found (/usr/local/lib/libltdl.so)
===> Returning to build of nest-2.20.1_1
===> nest-2.20.1_1 depends on shared library: libreadline.so.8 - found (/usr/local/lib/libreadline.so.8)
===========================================================================
=======================<phase: configure >============================
===> Configuring for nest-2.20.1_1
===> Performing out-of-source build
/bin/mkdir -p /wrkdirs/usr/ports/science/nest/work/.build
-- The CXX compiler identification is Clang 11.0.1
-- The C compiler identification is Clang 11.0.1
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /nxb-bin/usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /nxb-bin/usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE)
-- Looking for include file inttypes.h
-- Looking for include file inttypes.h - found
-- Looking for include file mach-o/dyld.h
-- Looking for include file mach-o/dyld.h - not found
-- Looking for include file mach/mach.h
-- Looking for include file mach/mach.h - not found
-- Looking for include file memory.h
-- Looking for include file memory.h - found
-- Looking for include file stdint.h
-- Looking for include file stdint.h - found
-- Looking for include file sys/types.h
-- Looking for include file sys/types.h - found
-- Looking for C++ include istream
-- Looking for C++ include istream - found
-- Looking for C++ include ostream
-- Looking for C++ include ostream - found
-- Looking for C++ include sstream
-- Looking for C++ include sstream - found
-- Looking for stddef.h
-- Looking for stddef.h - found
-- Check size of long long
-- Check size of long long - done
-- Check size of u_int16_t
-- Check size of u_int16_t - done
-- Check size of uint16_t
-- Check size of uint16_t - done
-- Check size of u_int64_t
-- Check size of u_int64_t - done
-- Check size of uint64_t
-- Check size of uint64_t - done
-- Check size of long
-- Check size of long - done
-- Looking for NAN
-- Looking for NAN - found
-- Looking for isnan
-- Looking for isnan - found
-- Looking for M_E
-- Looking for M_E - found
-- Looking for M_PI
-- Looking for M_PI - found
-- Looking for expm1
-- Looking for expm1 - not found
-- Host triple: armv7-pc-freebsd
-- Target triple: armv7-pc-freebsd
-- Found LTDL: /usr/local/lib/libltdl.so
-- Found Readline: /usr/local/lib/libreadline.so (found version "8.1")
-- Found PkgConfig: pkgconf (found version "1.7.4")
-- Found GSL: /usr/local/include (found version "2.7")
-- Found PythonInterp: /usr/local/bin/python3.8 (found version "3.8.10")
-- Found PythonLibs: /usr/local/lib/libpython3.8.so (found suitable exact version "3.8.10")
-- Found Cython: /usr/local/bin/cython-3.8 (found version "0.29.23")
-- Could NOT find OpenMP_C (missing: OpenMP_C_FLAGS OpenMP_C_LIB_NAMES)
-- Could NOT find OpenMP_CXX (missing: OpenMP_CXX_FLAGS OpenMP_CXX_LIB_NAMES)
-- Could NOT find OpenMP (missing: OpenMP_C_FOUND OpenMP_CXX_FOUND)
CMake Error at cmake/ProcessOptions.cmake:456 (message):
CMake can not find OpenMP.
Call Stack (most recent call first):
CMakeLists.txt:156 (nest_process_with_openmp)
-- Configuring incomplete, errors occurred!
See also "/wrkdirs/usr/ports/science/nest/work/.build/CMakeFiles/CMakeOutput.log".
See also "/wrkdirs/usr/ports/science/nest/work/.build/CMakeFiles/CMakeError.log".
*** Error code 1
Stop.
make: stopped in /usr/ports/science/nest