[package - 130arm64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-22.0.0 in build
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Date: Fri, 03 Sep 2021 20:17:38 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: yuri@FreeBSD.org
Log URL: http://ampere1.nyi.freebsd.org/data/130arm64-quarterly/3b76cdf297ea/logs/ncbi-cxx-toolkit-22.0.0.log
Build URL: http://ampere1.nyi.freebsd.org/build.html?mastername=130arm64-quarterly&build=3b76cdf297ea
Log:
=>> Building biology/ncbi-cxx-toolkit
build started at Fri Sep 3 19:53:32 UTC 2021
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-22.0.0
building for: FreeBSD 130arm64-quarterly-job-02 13.0-RELEASE-p4 FreeBSD 13.0-RELEASE-p4 arm64
maintained by: yuri@FreeBSD.org
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=======================<phase: check-sanity >============================
===> License PD accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> ncbi-cxx-toolkit-22.0.0 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.16.3.txz
[130arm64-quarterly-job-02] Installing pkg-1.16.3...
[130arm64-quarterly-job-02] Extracting pkg-1.16.3: .......... done
===> ncbi-cxx-toolkit-22.0.0 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of ncbi-cxx-toolkit-22.0.0
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License PD accepted by the user
===> Fetching all distfiles required by ncbi-cxx-toolkit-22.0.0 for building
===========================================================================
=======================<phase: checksum >============================
===> License PD accepted by the user
===> Fetching all distfiles required by ncbi-cxx-toolkit-22.0.0 for building
=> SHA256 Checksum OK for ncbi_cxx--22_0_0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> License PD accepted by the user
===> Fetching all distfiles required by ncbi-cxx-toolkit-22.0.0 for building
===> Extracting for ncbi-cxx-toolkit-22.0.0
=> SHA256 Checksum OK for ncbi_cxx--22_0_0.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for ncbi-cxx-toolkit-22.0.0
===> Applying FreeBSD patches for ncbi-cxx-toolkit-22.0.0 from /usr/ports/biology/ncbi-cxx-toolkit/files
===========================================================================
=======================<phase: build-depends >============================
===> ncbi-cxx-toolkit-22.0.0 depends on package: gmake>=4.3 - not found
===> Installing existing package /packages/All/gmake-4.3_2.txz
[130arm64-quarterly-job-02] Installing gmake-4.3_2...
[130arm64-quarterly-job-02] `-- Installing gettext-runtime-0.21...
[130arm64-quarterly-job-02] | `-- Installing indexinfo-0.3.1...
[130arm64-quarterly-job-02] | `-- Extracting indexinfo-0.3.1: .... done
[130arm64-quarterly-job-02] `-- Extracting gettext-runtime-0.21: .......... done
[130arm64-quarterly-job-02] Extracting gmake-4.3_2: .......... done
===> ncbi-cxx-toolkit-22.0.0 depends on package: gmake>=4.3 - found
===> Returning to build of ncbi-cxx-toolkit-22.0.0
===> ncbi-cxx-toolkit-22.0.0 depends on file: /usr/local/bin/python3.8 - not found
===> Installing existing package /packages/All/python38-3.8.10.txz
[130arm64-quarterly-job-02] Installing python38-3.8.10...
[130arm64-quarterly-job-02] `-- Installing libffi-3.3_1...
[130arm64-quarterly-job-02] `-- Extracting libffi-3.3_1: .......... done
[130arm64-quarterly-job-02] `-- Installing mpdecimal-2.5.1...
[130arm64-quarterly-job-02] `-- Extracting mpdecimal-2.5.1: .......... done
[130arm64-quarterly-job-02] `-- Installing readline-8.1.1...
[130arm64-quarterly-job-02] `-- Extracting readline-8.1.1: .......... done
<snip>
virtual const char* GetErrCodeString() const
^
/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/include/connect/services/netservice_api_expt.hpp:57:25: note: overridden virtual function is here
virtual const char* GetErrCodeString(void) const
^
In file included from /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/src/connect/services/test/test_nsstorage.cpp:34:
In file included from /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/include/connect/services/netcache_api.hpp:42:
/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/include/connect/services/netcache_api_expt.hpp:109:25: warning: 'GetErrCodeString' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
virtual const char* GetErrCodeString() const
^
/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/include/connect/services/netcache_api_expt.hpp:78:25: note: overridden virtual function is here
virtual const char* GetErrCodeString() const
^
In file included from /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/src/connect/services/test/test_nsstorage.cpp:34:
/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/include/connect/services/netcache_api.hpp:674:5: warning: 'auto_ptr<std::__1::basic_istream<char>>' is deprecated [-Wdeprecated-declarations]
auto_ptr<CNcbiIstream> m_IStream;
^
/usr/include/c++/v1/memory:2029:28: note: 'auto_ptr<std::__1::basic_istream<char>>' has been explicitly marked deprecated here
class _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 auto_ptr
^
/usr/include/c++/v1/__config:985:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
# define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
^
/usr/include/c++/v1/__config:974:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
In file included from /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/src/connect/services/test/test_nsstorage.cpp:34:
/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/include/connect/services/netcache_api.hpp:675:5: warning: 'auto_ptr<std::__1::basic_ostream<char>>' is deprecated [-Wdeprecated-declarations]
auto_ptr<CNcbiOstream> m_OStream;
^
/usr/include/c++/v1/memory:2029:28: note: 'auto_ptr<std::__1::basic_ostream<char>>' has been explicitly marked deprecated here
class _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 auto_ptr
^
/usr/include/c++/v1/__config:985:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
# define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
^
/usr/include/c++/v1/__config:974:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/src/connect/services/test/test_nsstorage.cpp:67:5: warning: 'auto_ptr<ncbi::CArgDescriptions>' is deprecated [-Wdeprecated-declarations]
auto_ptr<CArgDescriptions> arg_desc(new CArgDescriptions);
^
/usr/include/c++/v1/memory:2029:28: note: 'auto_ptr<ncbi::CArgDescriptions>' has been explicitly marked deprecated here
class _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 auto_ptr
^
/usr/include/c++/v1/__config:985:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
# define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
^
/usr/include/c++/v1/__config:974:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/src/connect/services/test/test_nsstorage.cpp:108:5: warning: 'auto_ptr<ncbi::IBlobStorage>' is deprecated [-Wdeprecated-declarations]
auto_ptr<IBlobStorage> storage1(new CBlobStorage_NetCache(nc_api));
^
/usr/include/c++/v1/memory:2029:28: note: 'auto_ptr<ncbi::IBlobStorage>' has been explicitly marked deprecated here
class _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 auto_ptr
^
/usr/include/c++/v1/__config:985:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
# define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
^
/usr/include/c++/v1/__config:974:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/src/connect/services/test/test_nsstorage.cpp:109:5: warning: 'auto_ptr<ncbi::IBlobStorage>' is deprecated [-Wdeprecated-declarations]
auto_ptr<IBlobStorage> storage2(new CBlobStorage_NetCache(nc_api));
^
/usr/include/c++/v1/memory:2029:28: note: 'auto_ptr<ncbi::IBlobStorage>' has been explicitly marked deprecated here
class _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 auto_ptr
^
/usr/include/c++/v1/__config:985:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
# define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
^
/usr/include/c++/v1/__config:974:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
13 warnings generated.
gmake[7]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/services/test'
Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/src/connect/services/test/test_nsstorage.cpp.
/usr/bin/c++ -stdlib=libc++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/include /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/src/connect/services/test/test_nsstorage.cpp -o test_nsstorage.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++11 -Wl,-rpath,/usr/local/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fstack-protector-strong -O test_nsstorage.o -Wl,-rpath-link,/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/lib -L/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/lib -lxconnserv -lxconnect -lxutil -lxncbi -lz -lm -pthread -o test_nsstorage
/bin/sh /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/scripts/common/impl/if_diff.sh /bin/ln -f test_nsstorage /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/bin
/bin/ln -f test_nsstorage /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/bin/test_nsstorage
gmake[7]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/services/test'
gmake[7]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/services/test'
gmake[7]: warning: -j2 forced in submake: resetting jobserver mode.
gmake[7]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/services/test'
gmake[7]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/services/test'
gmake[7]: warning: -j2 forced in submake: resetting jobserver mode.
gmake[7]: *** No rule to make target '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/status/Boost.Test.Included.enabled', needed by 'requirements'. Stop.
gmake[7]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/services/test'
NOTE: skipping project "test_ic_client" due to unmet requirements
gmake[7]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/services/test'
gmake[7]: warning: -j2 forced in submake: resetting jobserver mode.
gmake[7]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/services/test'
gmake[7]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/services/test'
gmake[7]: warning: -j2 forced in submake: resetting jobserver mode.
gmake[7]: *** No rule to make target '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/status/Boost.Test.Included.enabled', needed by 'requirements'. Stop.
gmake[7]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/services/test'
NOTE: skipping project "test_netcache_api" due to unmet requirements
gmake[7]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/services/test'
gmake[7]: warning: -j2 forced in submake: resetting jobserver mode.
gmake[7]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/services/test'
gmake[7]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/services/test'
gmake[7]: warning: -j2 forced in submake: resetting jobserver mode.
gmake[7]: *** No rule to make target '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/status/Boost.Test.Included.enabled', needed by 'requirements'. Stop.
gmake[7]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/services/test'
NOTE: skipping project "test_json_over_uttp" due to unmet requirements
gmake[7]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/services/test'
gmake[7]: warning: -j2 forced in submake: resetting jobserver mode.
gmake[7]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/services/test'
gmake[7]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/services/test'
gmake[7]: warning: -j2 forced in submake: resetting jobserver mode.
gmake[7]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/services/test'
/usr/local/bin/gmake -f /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/Makefile.app.tmpl srcdir=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/src/connect/services/test TMPL=test_compound_id -w -j2 --jobserver-auth=17,18 all
gmake[7]: warning: -j2 forced in submake: resetting jobserver mode.
In file included from /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/src/connect/services/test/test_compound_id.cpp:36:
/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/include/connect/services/compound_id.hpp:99:25: warning: 'GetErrCodeString' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
virtual const char* GetErrCodeString() const;
^
/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/include/corelib/ncbiexpt.hpp:852:25: note: overridden virtual function is here
virtual const char* GetErrCodeString(void) const;
^
/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/src/connect/services/test/test_compound_id.cpp:211:5: warning: 'auto_ptr<ncbi::CArgDescriptions>' is deprecated [-Wdeprecated-declarations]
auto_ptr<CArgDescriptions> arg_desc(new CArgDescriptions);
^
/usr/include/c++/v1/memory:2029:28: note: 'auto_ptr<ncbi::CArgDescriptions>' has been explicitly marked deprecated here
class _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX11 auto_ptr
^
/usr/include/c++/v1/__config:985:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX11'
# define _LIBCPP_DEPRECATED_IN_CXX11 _LIBCPP_DEPRECATED
^
/usr/include/c++/v1/__config:974:48: note: expanded from macro '_LIBCPP_DEPRECATED'
# define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
^
2 warnings generated.
gmake[7]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/services/test'
Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/src/connect/services/test/test_compound_id.cpp.
/usr/bin/c++ -stdlib=libc++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/include /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/src/connect/services/test/test_compound_id.cpp -o test_compound_id.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++11 -Wl,-rpath,/usr/local/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fstack-protector-strong -O test_compound_id.o -Wl,-rpath-link,/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/lib -L/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/lib -lxconnserv -lxthrserv -lxconnect -lxutil -lxncbi -lz -lm -pthread -o test_compound_id
/bin/sh /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/scripts/common/impl/if_diff.sh /bin/ln -f test_compound_id /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/bin
/bin/ln -f test_compound_id /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/bin/test_compound_id
gmake[7]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/services/test'
gmake[7]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/services/test'
gmake[7]: warning: -j2 forced in submake: resetting jobserver mode.
gmake[7]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/services/test'
gmake[7]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/services/test'
gmake[7]: warning: -j2 forced in submake: resetting jobserver mode.
gmake[7]: *** No rule to make target '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/status/Boost.Test.Included.enabled', needed by 'requirements'. Stop.
gmake[7]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/services/test'
NOTE: skipping project "test_netservice_params" due to unmet requirements
gmake[6]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/services/test'
gmake[5]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/services/test'
gmake[4]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/services'
/usr/local/bin/gmake -C ext -w -j2 --jobserver-auth=11,12 all_r || exit 5
gmake[4]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect'
gmake[4]: warning: -j2 forced in submake: resetting jobserver mode.
gmake[4]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/ext'
/usr/local/bin/gmake -C test -w -j2 --jobserver-auth=11,12 all_r || exit 5
gmake[4]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect'
gmake[4]: warning: -j2 forced in submake: resetting jobserver mode.
gmake[5]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/test'
gmake[5]: warning: -j2 forced in submake: resetting jobserver mode.
gmake[6]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/test'
gmake[6]: warning: -j2 forced in submake: resetting jobserver mode.
gmake[6]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/test'
gmake[6]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/test'
gmake[6]: warning: -j2 forced in submake: resetting jobserver mode.
gmake[6]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/test'
/usr/local/bin/gmake -f /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/Makefile.app.tmpl srcdir=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/src/connect/test TMPL=test_ncbi_buffer -w -j2 --jobserver-auth=15,16 all
gmake[6]: warning: -j2 forced in submake: resetting jobserver mode.
ld: error: /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/lib/libconnect.so: undefined reference to NCBI_SwapPointers [--no-allow-shlib-undefined]
c++: error: linker command failed with exit code 1 (use -v to see invocation)
gmake[6]: *** [/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/Makefile.app:156: test_ncbi_buffer] Error 1
gmake[6]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/test'
Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/src/connect/test/test_ncbi_buffer.c.
/usr/bin/cc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/include /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/src/connect/test/test_ncbi_buffer.c -o test_ncbi_buffer.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++11 -Wl,-rpath,/usr/local/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fstack-protector-strong -O test_ncbi_buffer.o -Wl,-rpath-link,/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/lib -L/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/lib -lconnect -lz -lm -pthread -o test_ncbi_buffer
gmake[6]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/test'
FAILED: src/connect/test/Makefile.test_ncbi_buffer.app
gmake[6]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/test'
gmake[6]: warning: -j2 forced in submake: resetting jobserver mode.
/bin/rm -f test_ncbi_buffer .test_ncbi_buffer.stamp
gmake[6]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/test'
gmake[5]: *** [/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/src/build-system/Makefile.meta_l:319: all.nonusr] Error 2
gmake[5]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/test'
gmake[4]: *** [/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/src/build-system/Makefile.meta_l:276: all_l.real] Error 2
gmake[4]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect/test'
gmake[3]: *** [/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/src/build-system/Makefile.meta_r:41: all_r.real] Error 5
gmake[3]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build/connect'
gmake[2]: *** [/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/src/build-system/Makefile.meta_r:41: all_r.real] Error 5
gmake[2]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0/Clang-ReleaseMTDLL64/build'
gmake[1]: *** [Makefile:24: all] Error 2
gmake[1]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/ncbi_cxx--22_0_0'
===> Compilation failed unexpectedly.
Try to set MAKE_JOBS_UNSAFE=yes and rebuild before reporting the failure to
the maintainer.
*** Error code 1
Stop.
make: stopped in /usr/ports/biology/ncbi-cxx-toolkit