[package - main-amd64-default][science/py-pygmo2] Failed for py38-pygmo2-2.18.0 in configure
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Date: Thu, 30 Dec 2021 01:29:00 UTC
You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: yuri@FreeBSD.org Log URL: http://beefy18.nyi.freebsd.org/data/main-amd64-default/pb62f24f32e66_sc3a688ef4d/logs/py38-pygmo2-2.18.0.log Build URL: http://beefy18.nyi.freebsd.org/build.html?mastername=main-amd64-default&build=pb62f24f32e66_sc3a688ef4d Log: =>> Building science/py-pygmo2 ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" make: "/usr/ports/Mk/Uses/compiler.mk" line 73: warning: "cc --version" returned non-zero status ld-elf.so.1: Shared object "libc++.so.1" not found, required by "clang" make: "/usr/ports/Mk/Uses/compiler.mk" line 92: warning: "/usr/bin/clang --version" returned non-zero status build started at Thu Dec 30 01:28:37 UTC 2021 port directory: /usr/ports/science/py-pygmo2 package name: py38-pygmo2-2.18.0 building for: FreeBSD main-amd64-default-job-07 14.0-CURRENT FreeBSD 14.0-CURRENT 1400045 amd64 maintained by: yuri@FreeBSD.org Makefile ident: Poudriere version: 3.2.8-21-g883afb07 Host OSVERSION: 1400042 Jail OSVERSION: 1400045 Job Id: 07 !!! Jail is newer than host. (Jail: 1400045, Host: 1400042) !!! !!! This is not supported. !!! !!! Host kernel must be same or newer than jail. !!! !!! Expect build failures. !!! ---Begin Environment--- SHELL=/bin/sh OSVERSION=1400045 UNAME_v=FreeBSD 14.0-CURRENT 1400045 UNAME_r=14.0-CURRENT BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-21-g883afb07 MASTERMNT=/usr/local/poudriere/data/.m/main-amd64-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/main-amd64-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=main-amd64-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/main-amd64-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR=py38 DEPENDS_ARGS= MAKE_ARGS= FLAVOR=py38 ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" make: "/usr/ports/Mk/Uses/compiler.mk" line 73: warning: "cc --version" returned non-zero status ld-elf.so.1: Shared object "libc++.so.1" not found, required by "clang" make: "/usr/ports/Mk/Uses/compiler.mk" line 92: warning: "/usr/bin/clang --version" returned non-zero status ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- PYTHON="/usr/local/bin/python3.8" XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-pygmo2/work-py38 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-pygmo2/work-py38 XDG_CACHE_HOME=/wrkdirs/usr/ports/science/py-pygmo2/work-py38/.cache HOME=/wrkdirs/usr/ports/science/py-pygmo2/work-py38 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/py-pygmo2/work-py38/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- NINJA_STATUS="[%p %s/%t] " XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-pygmo2/work-py38 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-pygmo2/work-py38 XDG_CACHE_HOME=/wrkdirs/usr/ports/science/py-pygmo2/work-py38/.cache HOME=/wrkdirs/usr/ports/science/py-pygmo2/work-py38 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/py-pygmo2/work-py38/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES DESTDIR=/wrkdirs/usr/ports/science/py-pygmo2/work-py38/stage PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I/usr/local/include/coin " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTAL L_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- CMAKE_BUILD_TYPE="release" PYTHON_INCLUDEDIR=include/python3.8 PYTHON_LIBDIR=lib/python3.8 PYTHON_PLATFORM=freebsd14 PYTHON_SITELIBDIR=lib/python3.8/site-packages PYTHON_SUFFIX=38 PYTHON_EXT_SUFFIX=.cpython-38 PYTHON_VER=3.8 PYTHON_VERSION=python3.8 PYTHON2="@comment " PYTHON3="" OSREL=14.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/pygmo2" EXAMPLESDIR="share/examples/pygmo2" DATADIR="share/pygmo2" WWWDIR="www/pygmo2" ETCDIR="etc/pygmo2" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/pygmo2 DOCSDIR=/usr/local/share/doc/pygmo2 EXAMPLESDIR=/usr/local/share/examples/pygmo2 WWWDIR=/usr/local/www/pygmo2 ETCDIR=/usr/local/etc/pygmo2 --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CXXINTERNAL_acaad9ca=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "c++" CC_OUTPUT_921dbbb2_58173849=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" CC_OUTPUT_921dbbb2_9bdba57c=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" CC_OUTPUT_921dbbb2_6a4fe7f5=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" CC_OUTPUT_921dbbb2_6bcac02b=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" CC_OUTPUT_921dbbb2_67d20829=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" CC_OUTPUT_921dbbb2_bfa62e83=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" CC_OUTPUT_921dbbb2_f0b4d593=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" CC_OUTPUT_921dbbb2_308abb44=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" CC_OUTPUT_921dbbb2_f00456e5=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" CC_OUTPUT_921dbbb2_65ad290d=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" CC_OUTPUT_921dbbb2_f2776b26=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" CC_OUTPUT_921dbbb2_b2657cc3=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" CC_OUTPUT_921dbbb2_380987f7=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" CC_OUTPUT_921dbbb2_160933ec=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" CC_OUTPUT_921dbbb2_fb62803b=ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" ARCH=amd64 OPSYS=FreeBSD _OSRELEASE=14.0-CURRENT OSREL=14.0 OSVERSION=1400045 PYTHONBASE=/usr/local HAVE_COMPAT_IA32_KERN=YES CONFIGURE_MAX_CMD_LEN=524288 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" make: "/usr/ports/Mk/Uses/compiler.mk" line 73: warning: "cc --version" returned non-zero status ld-elf.so.1: Shared object "libc++.so.1" not found, required by "clang" make: "/usr/ports/Mk/Uses/compiler.mk" line 92: warning: "/usr/bin/clang --version" returned non-zero status =======================<phase: check-sanity >============================ ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" make: "/usr/ports/Mk/Uses/compiler.mk" line 73: warning: "cc --version" returned non-zero status ld-elf.so.1: Shared object "libc++.so.1" not found, required by "clang" make: "/usr/ports/Mk/Uses/compiler.mk" line 92: warning: "/usr/bin/clang --version" returned non-zero status ===> License MPL20 accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" make: "/usr/ports/Mk/Uses/compiler.mk" line 73: warning: "cc --version" returned non-zero status ld-elf.so.1: Shared object "libc++.so.1" not found, required by "clang" make: "/usr/ports/Mk/Uses/compiler.mk" line 92: warning: "/usr/bin/clang --version" returned non-zero status ===> py38-pygmo2-2.18.0 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.17.5.pkg [main-amd64-default-job-07] Installing pkg-1.17.5... [main-amd64-default-job-07] Extracting pkg-1.17.5: .......... done ===> py38-pygmo2-2.18.0 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of py38-pygmo2-2.18.0 =========================================================================== =======================<phase: fetch-depends >============================ ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" make: "/usr/ports/Mk/Uses/compiler.mk" line 73: warning: "cc --version" returned non-zero status ld-elf.so.1: Shared object "libc++.so.1" not found, required by "clang" make: "/usr/ports/Mk/Uses/compiler.mk" line 92: warning: "/usr/bin/clang --version" returned non-zero status =========================================================================== ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" make: "/usr/ports/Mk/Uses/compiler.mk" line 73: warning: "cc --version" returned non-zero status ld-elf.so.1: Shared object "libc++.so.1" not found, required by "clang" make: "/usr/ports/Mk/Uses/compiler.mk" line 92: warning: "/usr/bin/clang --version" returned non-zero status =======================<phase: fetch >============================ ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" make: "/usr/ports/Mk/Uses/compiler.mk" line 73: warning: "cc --version" returned non-zero status ld-elf.so.1: Shared object "libc++.so.1" not found, required by "clang" make: "/usr/ports/Mk/Uses/compiler.mk" line 92: warning: "/usr/bin/clang --version" returned non-zero status ===> License MPL20 accepted by the user ===> Fetching all distfiles required by py38-pygmo2-2.18.0 for building =========================================================================== <snip> [main-amd64-default-job-07] | `-- Extracting liblz4-1.9.3,1: .......... done [main-amd64-default-job-07] | `-- Installing zstd-1.5.0... [main-amd64-default-job-07] | `-- Extracting zstd-1.5.0: .......... done [main-amd64-default-job-07] `-- Extracting libarchive-3.5.2,1: .......... done [main-amd64-default-job-07] `-- Installing libuv-1.42.0... [main-amd64-default-job-07] `-- Extracting libuv-1.42.0: .......... done [main-amd64-default-job-07] `-- Installing rhash-1.4.2... [main-amd64-default-job-07] | `-- Installing gettext-runtime-0.21... [main-amd64-default-job-07] | | `-- Installing indexinfo-0.3.1... [main-amd64-default-job-07] | | `-- Extracting indexinfo-0.3.1: .... done [main-amd64-default-job-07] | `-- Extracting gettext-runtime-0.21: .......... done [main-amd64-default-job-07] `-- Extracting rhash-1.4.2: .......... done [main-amd64-default-job-07] Extracting cmake-3.22.1: .......... done ===== Message from ca_root_nss-3.71: -- FreeBSD does not, and can not warrant that the certification authorities whose certificates are included in this package have in any way been audited for trustworthiness or RFC 3647 compliance. Assessment and verification of trust is the complete responsibility of the system administrator. This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem ===> py38-pygmo2-2.18.0 depends on file: /usr/local/bin/cmake - found ===> Returning to build of py38-pygmo2-2.18.0 ===> py38-pygmo2-2.18.0 depends on executable: ninja - not found ===> Installing existing package /packages/All/ninja-1.10.2,2.pkg [main-amd64-default-job-07] Installing ninja-1.10.2,2... [main-amd64-default-job-07] `-- Installing python38-3.8.12_1... [main-amd64-default-job-07] | `-- Installing libffi-3.3_1... [main-amd64-default-job-07] | `-- Extracting libffi-3.3_1: .......... done [main-amd64-default-job-07] | `-- Installing mpdecimal-2.5.1... [main-amd64-default-job-07] | `-- Extracting mpdecimal-2.5.1: .......... done [main-amd64-default-job-07] | `-- Installing readline-8.1.1... [main-amd64-default-job-07] | `-- Extracting readline-8.1.1: .......... done [main-amd64-default-job-07] `-- Extracting python38-3.8.12_1: .......... done [main-amd64-default-job-07] Extracting ninja-1.10.2,2: ........ done ===== Message from python38-3.8.12_1: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py38-gdbm databases/py-gdbm@py38 py38-sqlite3 databases/py-sqlite3@py38 py38-tkinter x11-toolkits/py-tkinter@py38 ===> py38-pygmo2-2.18.0 depends on executable: ninja - found ===> Returning to build of py38-pygmo2-2.18.0 ===> py38-pygmo2-2.18.0 depends on file: /usr/local/bin/python3.8 - found =========================================================================== =======================<phase: lib-depends >============================ ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" make: "/usr/ports/Mk/Uses/compiler.mk" line 73: warning: "cc --version" returned non-zero status ld-elf.so.1: Shared object "libc++.so.1" not found, required by "clang" make: "/usr/ports/Mk/Uses/compiler.mk" line 92: warning: "/usr/bin/clang --version" returned non-zero status ===> py38-pygmo2-2.18.0 depends on shared library: libpagmo.so - not found ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" make[1]: "/usr/ports/Mk/Uses/compiler.mk" line 73: warning: "cc --version" returned non-zero status ld-elf.so.1: Shared object "libc++.so.1" not found, required by "clang" make[1]: "/usr/ports/Mk/Uses/compiler.mk" line 92: warning: "/usr/bin/clang --version" returned non-zero status ===> Installing existing package /packages/All/pagmo2-2.18.0_2.pkg [main-amd64-default-job-07] Installing pagmo2-2.18.0_2... [main-amd64-default-job-07] `-- Installing Ipopt-3.12.13_3... [main-amd64-default-job-07] | `-- Installing blas-3.10.0... [main-amd64-default-job-07] | | `-- Installing gcc10-10.3.0... [main-amd64-default-job-07] | | `-- Installing binutils-2.37_2,1... [main-amd64-default-job-07] | | `-- Extracting binutils-2.37_2,1: .......... done [main-amd64-default-job-07] | | `-- Installing gmp-6.2.1... [main-amd64-default-job-07] | | `-- Extracting gmp-6.2.1: .......... done [main-amd64-default-job-07] | | `-- Installing mpc-1.2.1... [main-amd64-default-job-07] | | | `-- Installing mpfr-4.1.0_1... [main-amd64-default-job-07] | | | `-- Extracting mpfr-4.1.0_1: .......... done [main-amd64-default-job-07] | | `-- Extracting mpc-1.2.1: ......... done [main-amd64-default-job-07] | | `-- Extracting gcc10-10.3.0: .......... done [main-amd64-default-job-07] | `-- Extracting blas-3.10.0: ........ done [main-amd64-default-job-07] | `-- Installing coin-or-asl-1.4.3... [main-amd64-default-job-07] | `-- Extracting coin-or-asl-1.4.3: .......... done [main-amd64-default-job-07] | `-- Installing lapack-3.10.0_1... [main-amd64-default-job-07] | `-- Extracting lapack-3.10.0_1: .......... done [main-amd64-default-job-07] `-- Extracting Ipopt-3.12.13_3: .......... done [main-amd64-default-job-07] `-- Installing boost-libs-1.72.0_6... [main-amd64-default-job-07] | `-- Installing icu-70.1_1,1... [main-amd64-default-job-07] | `-- Extracting icu-70.1_1,1: .......... done [main-amd64-default-job-07] `-- Extracting boost-libs-1.72.0_6: .......... done [main-amd64-default-job-07] `-- Installing eigen-3.3.9_1... [main-amd64-default-job-07] `-- Extracting eigen-3.3.9_1: .......... done [main-amd64-default-job-07] `-- Installing nlopt-2.7.1... [main-amd64-default-job-07] | `-- Installing guile2-2.2.7_1... [main-amd64-default-job-07] | | `-- Installing boehm-gc-threaded-8.0.6... [main-amd64-default-job-07] | | `-- Installing boehm-gc-8.0.6... 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[main-amd64-default-job-07] | | `-- Extracting pciids-20211124: ..... done [main-amd64-default-job-07] | | `-- Extracting libpciaccess-0.16: ......... done [main-amd64-default-job-07] | | `-- Installing libxml2-2.9.12... [main-amd64-default-job-07] | | `-- Extracting libxml2-2.9.12: .......... done [main-amd64-default-job-07] | `-- Extracting hwloc2-2.5.0: .......... done [main-amd64-default-job-07] `-- Extracting onetbb-2021.4.0: .......... done [main-amd64-default-job-07] Extracting pagmo2-2.18.0_2: .......... done ===== Message from gcc10-10.3.0: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc10 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===== Message from boost-libs-1.72.0_6: -- You have built the Boost library with thread support. Don't forget to add -pthread to your linker options when linking your code. ===== Message from metis-5.1.0_9: -- ===> NOTICE: The metis port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing ===> py38-pygmo2-2.18.0 depends on shared library: libpagmo.so - found (/usr/local/lib/libpagmo.so) ===> Returning to build of py38-pygmo2-2.18.0 ===> py38-pygmo2-2.18.0 depends on shared library: libboost_serialization.so - found (/usr/local/lib/libboost_serialization.so) ===> py38-pygmo2-2.18.0 depends on shared library: libnlopt.so - found (/usr/local/lib/libnlopt.so) =========================================================================== =======================<phase: configure >============================ ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc" make: "/usr/ports/Mk/Uses/compiler.mk" line 73: warning: "cc --version" returned non-zero status ld-elf.so.1: Shared object "libc++.so.1" not found, required by "clang" make: "/usr/ports/Mk/Uses/compiler.mk" line 92: warning: "/usr/bin/clang --version" returned non-zero status ===> Configuring for py38-pygmo2-2.18.0 ===> Performing out-of-source build /bin/mkdir -p /wrkdirs/usr/ports/science/py-pygmo2/work-py38/.build ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cmake" *** Error code 1 Stop. make: stopped in /usr/ports/science/py-pygmo2