[package - main-i386-default][science/conduit] Failed for conduit-0.8.0 in configure

From: <pkg-fallout_at_FreeBSD.org>
Date: Thu, 30 Dec 2021 01:22:05 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     yuri@FreeBSD.org
Log URL:        http://beefy17.nyi.freebsd.org/data/main-i386-default/pb62f24f32e66_sc3a688ef4d/logs/conduit-0.8.0.log
Build URL:      http://beefy17.nyi.freebsd.org/build.html?mastername=main-i386-default&build=pb62f24f32e66_sc3a688ef4d
Log:

=>> Building science/conduit
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc"
make: "/usr/ports/Mk/Uses/compiler.mk" line 73: warning: "cc --version" returned non-zero status
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "clang"
make: "/usr/ports/Mk/Uses/compiler.mk" line 92: warning: "/usr/bin/clang --version" returned non-zero status
build started at Thu Dec 30 01:21:44 UTC 2021
port directory: /usr/ports/science/conduit
package name: conduit-0.8.0
building for: FreeBSD main-i386-default-job-10 14.0-CURRENT FreeBSD 14.0-CURRENT 1400045 i386
maintained by: yuri@FreeBSD.org
Makefile ident: 
Poudriere version: 3.2.8-21-g883afb07
Host OSVERSION: 1400042
Jail OSVERSION: 1400045
Job Id: 10




!!! Jail is newer than host. (Jail: 1400045, Host: 1400042) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



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ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc"
make: "/usr/ports/Mk/Uses/compiler.mk" line 73: warning: "cc --version" returned non-zero status
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "clang"
make: "/usr/ports/Mk/Uses/compiler.mk" line 92: warning: "/usr/bin/clang --version" returned non-zero status
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yuri@FreeBSD.org
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--CONFIGURE_ARGS--

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--PLIST_SUB--
CMAKE_BUILD_TYPE="release" OSREL=14.0 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/conduit"  EXAMPLESDIR="share/examples/conduit"  DATADIR="share/conduit"  WWWDIR="www/conduit"  ETCDIR="etc/conduit"
--End PLIST_SUB--

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# XXX: We really need this but cannot use it while 'make checksum' does not
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ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc"
make: "/usr/ports/Mk/Uses/compiler.mk" line 73: warning: "cc --version" returned non-zero status
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "clang"
make: "/usr/ports/Mk/Uses/compiler.mk" line 92: warning: "/usr/bin/clang --version" returned non-zero status
=======================<phase: check-sanity   >============================
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc"
make: "/usr/ports/Mk/Uses/compiler.mk" line 73: warning: "cc --version" returned non-zero status
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "clang"
make: "/usr/ports/Mk/Uses/compiler.mk" line 92: warning: "/usr/bin/clang --version" returned non-zero status
===>  License BSD3CLAUSE accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc"
make: "/usr/ports/Mk/Uses/compiler.mk" line 73: warning: "cc --version" returned non-zero status
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "clang"
make: "/usr/ports/Mk/Uses/compiler.mk" line 92: warning: "/usr/bin/clang --version" returned non-zero status
===>   conduit-0.8.0 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.17.5.pkg
[main-i386-default-job-10] Installing pkg-1.17.5...
[main-i386-default-job-10] Extracting pkg-1.17.5: .......... done
===>   conduit-0.8.0 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of conduit-0.8.0
===========================================================================
=======================<phase: fetch-depends  >============================
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc"
make: "/usr/ports/Mk/Uses/compiler.mk" line 73: warning: "cc --version" returned non-zero status
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "clang"
make: "/usr/ports/Mk/Uses/compiler.mk" line 92: warning: "/usr/bin/clang --version" returned non-zero status
===========================================================================
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc"
make: "/usr/ports/Mk/Uses/compiler.mk" line 73: warning: "cc --version" returned non-zero status
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "clang"
make: "/usr/ports/Mk/Uses/compiler.mk" line 92: warning: "/usr/bin/clang --version" returned non-zero status
=======================<phase: fetch          >============================
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc"
make: "/usr/ports/Mk/Uses/compiler.mk" line 73: warning: "cc --version" returned non-zero status
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "clang"
<snip>
=> SHA256 Checksum OK for Alpine-DAV-spack_configs-16abefa_GH0.tar.gz.
=> SHA256 Checksum OK for LLNL-uberenv-105e384_GH0.tar.gz.
===========================================================================
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc"
make: "/usr/ports/Mk/Uses/compiler.mk" line 73: warning: "cc --version" returned non-zero status
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "clang"
make: "/usr/ports/Mk/Uses/compiler.mk" line 92: warning: "/usr/bin/clang --version" returned non-zero status
=======================<phase: extract-depends>============================
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc"
make: "/usr/ports/Mk/Uses/compiler.mk" line 73: warning: "cc --version" returned non-zero status
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "clang"
make: "/usr/ports/Mk/Uses/compiler.mk" line 92: warning: "/usr/bin/clang --version" returned non-zero status
===========================================================================
=======================<phase: extract        >============================
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc"
make: "/usr/ports/Mk/Uses/compiler.mk" line 73: warning: "cc --version" returned non-zero status
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "clang"
make: "/usr/ports/Mk/Uses/compiler.mk" line 92: warning: "/usr/bin/clang --version" returned non-zero status
===>  License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by conduit-0.8.0 for building
===>  Extracting for conduit-0.8.0
=> SHA256 Checksum OK for LLNL-conduit-v0.8.0_GH0.tar.gz.
=> SHA256 Checksum OK for LLNL-blt-86a7d6b_GH0.tar.gz.
=> SHA256 Checksum OK for Alpine-DAV-spack_configs-16abefa_GH0.tar.gz.
=> SHA256 Checksum OK for LLNL-uberenv-105e384_GH0.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc"
make: "/usr/ports/Mk/Uses/compiler.mk" line 73: warning: "cc --version" returned non-zero status
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "clang"
make: "/usr/ports/Mk/Uses/compiler.mk" line 92: warning: "/usr/bin/clang --version" returned non-zero status
===========================================================================
=======================<phase: patch          >============================
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc"
make: "/usr/ports/Mk/Uses/compiler.mk" line 73: warning: "cc --version" returned non-zero status
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "clang"
make: "/usr/ports/Mk/Uses/compiler.mk" line 92: warning: "/usr/bin/clang --version" returned non-zero status
===>  Patching for conduit-0.8.0
===>  Applying FreeBSD patches for conduit-0.8.0 from /usr/ports/science/conduit/files
===========================================================================
=======================<phase: build-depends  >============================
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc"
make: "/usr/ports/Mk/Uses/compiler.mk" line 73: warning: "cc --version" returned non-zero status
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "clang"
make: "/usr/ports/Mk/Uses/compiler.mk" line 92: warning: "/usr/bin/clang --version" returned non-zero status
===>   conduit-0.8.0 depends on file: /usr/local/bin/cmake - not found
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc"
make[1]: "/usr/ports/Mk/Uses/compiler.mk" line 73: warning: "cc --version" returned non-zero status
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "clang"
make[1]: "/usr/ports/Mk/Uses/compiler.mk" line 92: warning: "/usr/bin/clang --version" returned non-zero status
===>   Installing existing package /packages/All/cmake-3.22.1.pkg
[main-i386-default-job-10] Installing cmake-3.22.1...
[main-i386-default-job-10] `-- Installing curl-7.80.0...
[main-i386-default-job-10] |   `-- Installing ca_root_nss-3.71...
[main-i386-default-job-10] |   `-- Extracting ca_root_nss-3.71: ........ done
[main-i386-default-job-10] |   `-- Installing libnghttp2-1.46.0...
[main-i386-default-job-10] |   `-- Extracting libnghttp2-1.46.0: .......... done
[main-i386-default-job-10] |   `-- Installing libssh2-1.10.0,3...
[main-i386-default-job-10] |   `-- Extracting libssh2-1.10.0,3: .......... done
[main-i386-default-job-10] `-- Extracting curl-7.80.0: .......... done
[main-i386-default-job-10] `-- Installing expat-2.4.2...
[main-i386-default-job-10] `-- Extracting expat-2.4.2: .......... done
[main-i386-default-job-10] `-- Installing jsoncpp-1.9.5...
[main-i386-default-job-10] `-- Extracting jsoncpp-1.9.5: .......... done
[main-i386-default-job-10] `-- Installing libarchive-3.5.2,1...
[main-i386-default-job-10] |   `-- Installing liblz4-1.9.3,1...
[main-i386-default-job-10] |   `-- Extracting liblz4-1.9.3,1: .......... done
[main-i386-default-job-10] |   `-- Installing zstd-1.5.0...
[main-i386-default-job-10] |   `-- Extracting zstd-1.5.0: .......... done
[main-i386-default-job-10] `-- Extracting libarchive-3.5.2,1: .......... done
[main-i386-default-job-10] `-- Installing libuv-1.42.0...
[main-i386-default-job-10] `-- Extracting libuv-1.42.0: .......... done
[main-i386-default-job-10] `-- Installing rhash-1.4.2...
[main-i386-default-job-10] |   `-- Installing gettext-runtime-0.21...
[main-i386-default-job-10] |   | `-- Installing indexinfo-0.3.1...
[main-i386-default-job-10] |   | `-- Extracting indexinfo-0.3.1: .... done
[main-i386-default-job-10] |   `-- Extracting gettext-runtime-0.21: .......... done
[main-i386-default-job-10] `-- Extracting rhash-1.4.2: .......... done
[main-i386-default-job-10] Extracting cmake-3.22.1: .......... done
=====
Message from ca_root_nss-3.71:

--
FreeBSD does not, and can not warrant that the certification authorities
whose certificates are included in this package have in any way been
audited for trustworthiness or RFC 3647 compliance.

Assessment and verification of trust is the complete responsibility of the
system administrator.


This package installs symlinks to support root certificates discovery by
default for software that uses OpenSSL.

This enables SSL Certificate Verification by client software without manual
intervention.

If you prefer to do this manually, replace the following symlinks with
either an empty file or your site-local certificate bundle.

  * /etc/ssl/cert.pem
  * /usr/local/etc/ssl/cert.pem
  * /usr/local/openssl/cert.pem
===>   conduit-0.8.0 depends on file: /usr/local/bin/cmake - found
===>   Returning to build of conduit-0.8.0
===>   conduit-0.8.0 depends on executable: gfortran10 - not found
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc"
make[1]: "/usr/ports/Mk/Uses/compiler.mk" line 73: warning: "cc --version" returned non-zero status
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "clang"
make[1]: "/usr/ports/Mk/Uses/compiler.mk" line 92: warning: "/usr/bin/clang --version" returned non-zero status
===>   Installing existing package /packages/All/gcc10-10.3.0.pkg
[main-i386-default-job-10] Installing gcc10-10.3.0...
[main-i386-default-job-10] `-- Installing binutils-2.37_2,1...
[main-i386-default-job-10] `-- Extracting binutils-2.37_2,1: .......... done
[main-i386-default-job-10] `-- Installing gmp-6.2.1...
[main-i386-default-job-10] `-- Extracting gmp-6.2.1: .......... done
[main-i386-default-job-10] `-- Installing mpc-1.2.1...
[main-i386-default-job-10] |   `-- Installing mpfr-4.1.0_1...
[main-i386-default-job-10] |   `-- Extracting mpfr-4.1.0_1: .......... done
[main-i386-default-job-10] `-- Extracting mpc-1.2.1: ......... done
[main-i386-default-job-10] Extracting gcc10-10.3.0: .......... done
=====
Message from gcc10-10.3.0:

--
To ensure binaries built with this toolchain find appropriate versions
of the necessary run-time libraries, you may want to link using

  -Wl,-rpath=/usr/local/lib/gcc10

For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
transparently.
===>   conduit-0.8.0 depends on executable: gfortran10 - found
===>   Returning to build of conduit-0.8.0
===>   conduit-0.8.0 depends on file: /usr/local/bin/as - found
===========================================================================
=======================<phase: lib-depends    >============================
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc"
make: "/usr/ports/Mk/Uses/compiler.mk" line 73: warning: "cc --version" returned non-zero status
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "clang"
make: "/usr/ports/Mk/Uses/compiler.mk" line 92: warning: "/usr/bin/clang --version" returned non-zero status
===>   conduit-0.8.0 depends on shared library: libhdf5.so - not found
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc"
make[1]: "/usr/ports/Mk/Uses/compiler.mk" line 73: warning: "cc --version" returned non-zero status
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "clang"
make[1]: "/usr/ports/Mk/Uses/compiler.mk" line 92: warning: "/usr/bin/clang --version" returned non-zero status
===>   Installing existing package /packages/All/hdf5-1.10.6,1.pkg
[main-i386-default-job-10] Installing hdf5-1.10.6,1...
[main-i386-default-job-10] `-- Installing hdf-szip-2.1.1...
[main-i386-default-job-10] `-- Extracting hdf-szip-2.1.1: .......... done
[main-i386-default-job-10] Extracting hdf5-1.10.6,1: .......... done
===>   conduit-0.8.0 depends on shared library: libhdf5.so - found (/usr/local/lib/libhdf5.so)
===>   Returning to build of conduit-0.8.0
===>   conduit-0.8.0 depends on shared library: libmpi_cxx.so - not found
===>   Installing existing package /packages/All/openmpi-4.1.1.pkg
[main-i386-default-job-10] Installing openmpi-4.1.1...
[main-i386-default-job-10] `-- Installing hwloc2-2.5.0...
[main-i386-default-job-10] |   `-- Installing level-zero-1.7.4...
[main-i386-default-job-10] |   `-- Extracting level-zero-1.7.4: .......... done
[main-i386-default-job-10] |   `-- Installing libpciaccess-0.16...
[main-i386-default-job-10] |   | `-- Installing pciids-20211124...
[main-i386-default-job-10] |   | `-- Extracting pciids-20211124: ..... done
[main-i386-default-job-10] |   `-- Extracting libpciaccess-0.16: ......... done
[main-i386-default-job-10] |   `-- Installing libxml2-2.9.12...
[main-i386-default-job-10] |   `-- Extracting libxml2-2.9.12: .......... done
[main-i386-default-job-10] `-- Extracting hwloc2-2.5.0: .......... done
[main-i386-default-job-10] `-- Installing libevent-2.1.12...
[main-i386-default-job-10] `-- Extracting libevent-2.1.12: .......... done
[main-i386-default-job-10] `-- Installing libltdl-2.4.6...
[main-i386-default-job-10] `-- Extracting libltdl-2.4.6: .......... done
[main-i386-default-job-10] `-- Installing munge-0.5.14_1...
[main-i386-default-job-10] |   `-- Installing perl5-5.32.1_1...
[main-i386-default-job-10] |   `-- Extracting perl5-5.32.1_1: .......... done
[main-i386-default-job-10] `-- Extracting munge-0.5.14_1: ......... done
[main-i386-default-job-10] Extracting openmpi-4.1.1: .......... done
===>   conduit-0.8.0 depends on shared library: libmpi_cxx.so - found (/usr/local/mpi/openmpi/lib/libmpi_cxx.so)
===>   Returning to build of conduit-0.8.0
===>   conduit-0.8.0 depends on shared library: libsiloh5.so - not found
===>   Installing existing package /packages/All/silo-4.10.2_14.pkg
[main-i386-default-job-10] Installing silo-4.10.2_14...
[main-i386-default-job-10] `-- Installing readline-8.1.1...
[main-i386-default-job-10] `-- Extracting readline-8.1.1: .......... done
[main-i386-default-job-10] Extracting silo-4.10.2_14: .......... done
===>   conduit-0.8.0 depends on shared library: libsiloh5.so - found (/usr/local/lib/libsiloh5.so)
===>   Returning to build of conduit-0.8.0
===>   conduit-0.8.0 depends on shared library: libsz.so - found (/usr/local/lib/libsz.so)
===========================================================================
=======================<phase: configure      >============================
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cc"
make: "/usr/ports/Mk/Uses/compiler.mk" line 73: warning: "cc --version" returned non-zero status
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "clang"
make: "/usr/ports/Mk/Uses/compiler.mk" line 92: warning: "/usr/bin/clang --version" returned non-zero status
===>  Configuring for conduit-0.8.0
===>  Performing out-of-source build
/bin/mkdir -p /wrkdirs/usr/ports/science/conduit/work/.build
ld-elf.so.1: Shared object "libc++.so.1" not found, required by "cmake"
*** Error code 1

Stop.
make: stopped in /usr/ports/science/conduit