[package - 114i386-default][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-25.0.0 in build
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Date: Sat, 28 Aug 2021 13:10:25 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: yuri@FreeBSD.org
Log URL: http://beefy10.nyi.freebsd.org/data/114i386-default/63593047e03d/logs/ncbi-cxx-toolkit-25.0.0.log
Build URL: http://beefy10.nyi.freebsd.org/build.html?mastername=114i386-default&build=63593047e03d
Log:
=>> Building biology/ncbi-cxx-toolkit
build started at Sat Aug 28 12:42:59 UTC 2021
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-25.0.0
building for: FreeBSD 114i386-default-job-06 11.4-RELEASE-p13 FreeBSD 11.4-RELEASE-p13 i386
maintained by: yuri@FreeBSD.org
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=======================<phase: check-sanity >============================
===> License PD accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> ncbi-cxx-toolkit-25.0.0 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.17.1.pkg
[114i386-default-job-06] Installing pkg-1.17.1...
[114i386-default-job-06] Extracting pkg-1.17.1: .......... done
===> ncbi-cxx-toolkit-25.0.0 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of ncbi-cxx-toolkit-25.0.0
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License PD accepted by the user
=> ncbi_cxx--25_0_0.tar.gz doesn't seem to exist in /portdistfiles/.
=> Attempting to fetch ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools++/2021/Aug_18_2021/ncbi_cxx--25_0_0.tar.gz
ncbi_cxx--25_0_0.tar.gz 91 MB 76 MBps 02s
===> Fetching all distfiles required by ncbi-cxx-toolkit-25.0.0 for building
===========================================================================
=======================<phase: checksum >============================
===> License PD accepted by the user
===> Fetching all distfiles required by ncbi-cxx-toolkit-25.0.0 for building
=> SHA256 Checksum OK for ncbi_cxx--25_0_0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> License PD accepted by the user
===> Fetching all distfiles required by ncbi-cxx-toolkit-25.0.0 for building
===> Extracting for ncbi-cxx-toolkit-25.0.0
=> SHA256 Checksum OK for ncbi_cxx--25_0_0.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for ncbi-cxx-toolkit-25.0.0
===> Applying FreeBSD patches for ncbi-cxx-toolkit-25.0.0 from /usr/ports/biology/ncbi-cxx-toolkit/files
===========================================================================
=======================<phase: build-depends >============================
===> ncbi-cxx-toolkit-25.0.0 depends on package: gmake>=4.3 - not found
===> Installing existing package /packages/All/gmake-4.3_2.pkg
[114i386-default-job-06] Installing gmake-4.3_2...
[114i386-default-job-06] `-- Installing gettext-runtime-0.21...
[114i386-default-job-06] | `-- Installing indexinfo-0.3.1...
[114i386-default-job-06] | `-- Extracting indexinfo-0.3.1: .... done
[114i386-default-job-06] `-- Extracting gettext-runtime-0.21: .......... done
[114i386-default-job-06] Extracting gmake-4.3_2: .......... done
===> ncbi-cxx-toolkit-25.0.0 depends on package: gmake>=4.3 - found
===> Returning to build of ncbi-cxx-toolkit-25.0.0
===> ncbi-cxx-toolkit-25.0.0 depends on file: /usr/local/bin/python3.8 - not found
===> Installing existing package /packages/All/python38-3.8.11.pkg
<snip>
^
2 warnings generated.
gmake[5]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/connect'
Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/connection_pool.cpp.
Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/server_monitor.cpp.
Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/server.cpp.
Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/threaded_server.cpp.
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/threaded_server.cpp -o threaded_server.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/server.cpp -o server.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/server_monitor.cpp -o server_monitor.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/connection_pool.cpp -o connection_pool.o
/bin/rm -f libxthrserv.so .libxthrserv.so.stamp
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -shared -o libxthrserv.so -Wl,-rpath,/usr/local/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fstack-protector-strong -O -fPIC threaded_server.o server.o server_monitor.o connection_pool.o -L/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/lib -lxutil -lxconnect -lz
/bin/sh /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/scripts/common/impl/if_diff.sh /bin/ln -f libxthrserv.so /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/lib
/bin/ln -f libxthrserv.so /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/lib/libxthrserv.so
/bin/ln -f .xthrserv.dep /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/status/.xthrserv.dep
gmake[5]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/connect'
gmake[4]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/connect'
/usr/local/bin/gmake -C services -w all_r || exit 5
gmake[4]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/connect/services'
gmake[5]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/connect/services'
/usr/local/bin/gmake -f /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/Makefile.lib.tmpl srcdir=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services TMPL=xconnserv -w export-headers
gmake[6]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/connect/services'
gmake[6]: Nothing to be done for 'export-headers'.
gmake[6]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/connect/services'
/usr/local/bin/gmake -f /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/Makefile.lib.tmpl srcdir=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services TMPL=ncbi_xcache_netcache -w export-headers
gmake[6]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/connect/services'
gmake[6]: Nothing to be done for 'export-headers'.
gmake[6]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/connect/services'
/usr/local/bin/gmake -f /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/Makefile.lib.tmpl srcdir=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services TMPL=ncbi_xblobstorage_netcache -w export-headers
gmake[6]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/connect/services'
gmake[6]: Nothing to be done for 'export-headers'.
gmake[6]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/connect/services'
/usr/local/bin/gmake -f /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/Makefile.lib.tmpl srcdir=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services TMPL=xconnserv -w all
gmake[6]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/connect/services'
Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/netschedule_api_wn_info.cpp.
Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/compound_id_v0.cpp.
Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/compound_id.cpp.
Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/ns_job_serializer.cpp.
Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/ns_output_parser.cpp.
Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/netstorage_direct_nc.cpp.
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/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/grid_worker.cpp -o grid_worker.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/ns_client_factory.cpp -o ns_client_factory.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/grid_worker_app.cpp -o grid_worker_app.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/grid_client.cpp -o grid_client.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/grid_client_app.cpp -o grid_client_app.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/wn_commit_thread.cpp -o wn_commit_thread.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/wn_main_loop.cpp -o wn_main_loop.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/wn_cleanup.cpp -o wn_cleanup.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/wn_offline_mode.cpp -o wn_offline_mode.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/grid_control_thread.cpp -o grid_control_thread.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/grid_globals.cpp -o grid_globals.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/grid_rw_impl.cpp -o grid_rw_impl.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/remote_app.cpp -o remote_app.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/srv_connections.cpp -o srv_connections.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/netservice_api.cpp -o netservice_api.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/netservice_params.cpp -o netservice_params.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/netschedule_api.cpp -o netschedule_api.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/netschedule_api_submitter.cpp -o netschedule_api_submitter.o
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/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/netcache_rw.cpp -o netcache_rw.o
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/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/netcache_api.cpp -o netcache_api.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/netcache_api_admin.cpp -o netcache_api_admin.o
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/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/netservice_protocol_parser.cpp -o netservice_protocol_parser.o
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/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/json_over_uttp.cpp -o json_over_uttp.o
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/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/netstorage_rpc.cpp -o netstorage_rpc.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/netstorageobjectloc.cpp -o netstorageobjectloc.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/netstorageobjectinfo.cpp -o netstorageobjectinfo.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/netstorage_direct_nc.cpp -o netstorage_direct_nc.o
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/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/ns_job_serializer.cpp -o ns_job_serializer.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/compound_id.cpp -o compound_id.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/compound_id_v0.cpp -o compound_id_v0.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/netschedule_api_wn_info.cpp -o netschedule_api_wn_info.o
/bin/rm -f libxconnserv.so .libxconnserv.so.stamp
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -shared -o libxconnserv.so -Wl,-rpath,/usr/local/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fstack-protector-strong -O -fPIC grid_worker.o ns_client_factory.o grid_worker_app.o grid_client.o grid_client_app.o wn_commit_thread.o wn_main_loop.o wn_cleanup.o wn_offline_mode.o grid_control_thread.o grid_globals.o grid_rw_impl.o remote_app.o srv_connections.o netservice_api.o netservice_params.o netschedule_api.o netschedule_api_submitter.o netschedule_api_executor.o netschedule_api_reader.o netschedule_api_admin.o netschedule_api_getjob.o netschedule_key.o netschedule_api_expt.o netcache_key.o netcache_rw.o netcache_params.o netcache_api.o netcache_api_admin.o netcache_search.o netservice_protocol_parser.o util.o clparser.o json_over_uttp.o netstorage.o netstorage_rpc.o netstorageobjectloc.o netstorageobjectinfo.o netstorage_direct_nc.o ns_output_parser.o ns_job_serializer.o compound_id.o compound_id_v0.o netschedule_api_wn_info.o
-L/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/lib -lxthrserv -lxconnect -lxutil -lz
/bin/sh /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/scripts/common/impl/if_diff.sh /bin/ln -f libxconnserv.so /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/lib
/bin/ln -f libxconnserv.so /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/lib/libxconnserv.so
/bin/ln -f .xconnserv.dep /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/status/.xconnserv.dep
gmake[6]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/connect/services'
/usr/local/bin/gmake -f /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/Makefile.lib.tmpl srcdir=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services TMPL=ncbi_xcache_netcache -w all
gmake[6]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/connect/services'
Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/neticache_client.cpp.
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/neticache_client.cpp -o neticache_client.o
/bin/rm -f libncbi_xcache_netcache.a .libncbi_xcache_netcache.a.stamp
ar cr libncbi_xcache_netcache.a neticache_client.o
/bin/sh /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xcache_netcache.a /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/lib
/bin/ln -f libncbi_xcache_netcache.a /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/lib/libncbi_xcache_netcache.a
/bin/ln -f .ncbi_xcache_netcache-static.dep /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/status/.ncbi_xcache_netcache-static.dep
/bin/rm -f libncbi_xcache_netcache.so .libncbi_xcache_netcache.so.stamp
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -shared -o libncbi_xcache_netcache.so -Wl,-rpath,/usr/local/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fstack-protector-strong -O -fPIC neticache_client.o -L/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/lib -lxconnserv -lxconnect -lxutil -lm -pthread
/bin/sh /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xcache_netcache.so /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/lib
/bin/ln -f libncbi_xcache_netcache.so /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/lib/libncbi_xcache_netcache.so
/bin/ln -f .ncbi_xcache_netcache.dep /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/status/.ncbi_xcache_netcache.dep
gmake[6]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/connect/services'
/usr/local/bin/gmake -f /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/Makefile.lib.tmpl srcdir=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services TMPL=ncbi_xblobstorage_netcache -w all
gmake[6]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/connect/services'
Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/blob_storage_netcache.cpp.
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/blob_storage_netcache.cpp -o blob_storage_netcache.o
/bin/rm -f libncbi_xblobstorage_netcache.so .libncbi_xblobstorage_netcache.so.stamp
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -shared -o libncbi_xblobstorage_netcache.so -Wl,-rpath,/usr/local/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fstack-protector-strong -O -fPIC blob_storage_netcache.o -L/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/lib -lxconnserv -lxconnect -lxutil -lm -pthread
/bin/sh /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xblobstorage_netcache.so /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/lib
/bin/ln -f libncbi_xblobstorage_netcache.so /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/lib/libncbi_xblobstorage_netcache.so
/bin/ln -f .ncbi_xblobstorage_netcache.dep /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/status/.ncbi_xblobstorage_netcache.dep
gmake[6]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/connect/services'
gmake[5]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/connect/services'
/usr/local/bin/gmake -C test -w all_r || exit 5
gmake[5]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/connect/services/test'
gmake[6]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/connect/services/test'
/usr/local/bin/gmake -f /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/Makefile.app.tmpl srcdir=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/test TMPL=test_nsstorage -w all
/usr/bin/ld: warning: libxthrserv.so, needed by /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/lib/libxconnserv.so, not found (try using -rpath or -rpath-link)
/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/lib/libxconnserv.so: undefined reference to `ncbi::CServer::AddListener(ncbi::IServer_ConnectionFactory*, unsigned short)'
/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/lib/libxconnserv.so: undefined reference to `ncbi::SServer_Parameters::SServer_Parameters()'
/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/lib/libxconnserv.so: undefined reference to `ncbi::CServer::StartListening()'
/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/lib/libxconnserv.so: undefined reference to `ncbi::CServer::~CServer()'
/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/lib/libxconnserv.so: undefined reference to `typeinfo for ncbi::CServer'
/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/lib/libxconnserv.so: undefined reference to `vtable for ncbi::IServer_MessageHandler'
/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/lib/libxconnserv.so: undefined reference to `ncbi::CServer::Run()'
/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/lib/libxconnserv.so: undefined reference to `ncbi::IServer_MessageHandler::OnRead()'
/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/lib/libxconnserv.so: undefined reference to `ncbi::CServer::SetParameters(ncbi::SServer_Parameters const&)'
/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/lib/libxconnserv.so: undefined reference to `typeinfo for ncbi::IServer_MessageHandler'
/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/lib/libxconnserv.so: undefined reference to `typeinfo for ncbi::CServer_Exception'
/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/lib/libxconnserv.so: undefined reference to `ncbi::CServer::CServer()'
/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/lib/libxconnserv.so: undefined reference to `ncbi::Server_CheckLineMessage(SNcbiBuf**, void const*, unsigned int, bool&)'
c++: error: linker command failed with exit code 1 (use -v to see invocation)
gmake[7]: *** [/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/Makefile.app:157: test_nsstorage] Error 1
gmake[7]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/connect/services/test'
Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/test/test_nsstorage.cpp.
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-deprecated-register -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/inc -I/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/include -DNCBI_APP_BUILT_AS=test_nsstorage -DNCBI_BUILD_SESSION_ID=2d94e239-07fe-11ec-84b3-00259069ea2c /wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/connect/services/test/test_nsstorage.cpp -o test_nsstorage.o
/usr/bin/c++ -stdlib=libc++ -std=gnu++14 -Wl,-rpath,/usr/local/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fstack-protector-strong -O test_nsstorage.o -L/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/lib -lxconnserv -lxconnect -lxutil -lxncbi -lz -lm -pthread -o test_nsstorage
gmake[7]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/connect/services/test'
FAILED: src/connect/services/test/Makefile.test_nsstorage.app
gmake[7]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/connect/services/test'
/bin/rm -f test_nsstorage .test_nsstorage.stamp
gmake[7]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/connect/services/test'
gmake[6]: *** [/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/build-system/Makefile.meta_l:329: all.nonusr] Error 2
gmake[6]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/connect/services/test'
gmake[5]: *** [/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/build-system/Makefile.meta_l:286: all_l.real] Error 2
gmake[5]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/connect/services/test'
gmake[4]: *** [/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/build-system/Makefile.meta_r:41: all_r.real] Error 5
gmake[4]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/connect/services'
gmake[3]: *** [/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/build-system/Makefile.meta_r:41: all_r.real] Error 5
gmake[3]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build/connect'
gmake[2]: *** [/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/src/build-system/Makefile.meta_r:41: all_r.real] Error 5
gmake[2]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29/Clang1000-ReleaseMTDLL/build'
gmake[1]: *** [Makefile:24: all] Error 2
gmake[1]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/public-25.0.0-2021-08-18-11-21-29'
*** Error code 1
Stop.
make: stopped in /usr/ports/biology/ncbi-cxx-toolkit