From nobody Fri Oct 25 14:22:46 2024 X-Original-To: dev-commits-ports-main@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (unknown [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4XZlP238yRz5ZlgT; Fri, 25 Oct 2024 14:22:46 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R11" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4XZlP22NsRz4NJn; Fri, 25 Oct 2024 14:22:46 +0000 (UTC) (envelope-from git@FreeBSD.org) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1729866166; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=KUfWMgP+mayMX2Ec2MkRAdgu36y7FsUN1upUGI+nvpc=; b=VrgqHpALbBuYTOb09rHCTO6nNDk2Pg6SymtxYKGX10W1ex+42Ogzx/RuAlvOAHgT4OwpHJ I0wf5rHxRFfrTXVH8EZK8Raj+bwN1cSBxLjkRD1wQ8eF6tYbCmyEPp3usrHhWaeHTnioxj odSL/lV4IkIKRg/WzZ+l10FfQYa1C7Eij484gr7sNCaA8oUh9ZrAzBEq86qEDYRat2W2J/ LCh4iPMVdXfsKyJ1C+yf2cnb+GnbToyYYFVcdFAzd54ho+2dgL67bLAfiHPHnkmWyeuu6t fLwX2DMmoxZeILPDWzpdnRP+p7OOOyJO4q+1OuSshHtk7Ng3ch+reepnEN1zyA== ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1729866166; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=KUfWMgP+mayMX2Ec2MkRAdgu36y7FsUN1upUGI+nvpc=; b=CArCP3Yjk6JyHwoLaywEO+Wd3nltTL8VT0hBlwD/9Rj6pxP2qRdG2fKmFOsyf9Kb6GlLvJ x6DPAbqQQ/8vOTsm4F6V76kQ/EYXbn4Qx1II92P4wYcKJHntIFZIp8t4k1NDC//Ae3ewQ6 wrCXa1vBJV6YvsAd3ydWl4+8DY4X4hNxpxNojfA9OW6cv57D41FWo4g79fT4wOYjki7RK5 GL78UBH45zHNNp0B7r6LF9x66TfVsHvEBinKPZEpbnXfIv4GKwF5a25ls4CzEkkBfg1P0v dQMdYhopkr2Lmcob/0Fyw8PiS3hWECBMOQT8SbnzYBC3ZWZyGwi6wIymSfh4nQ== ARC-Authentication-Results: i=1; mx1.freebsd.org; none ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1729866166; a=rsa-sha256; cv=none; b=nSTL9gZMhoANg5jSwFKRtQulsLdm0CGDBuofcHaABfYsFBOuaZWDGV6xykH+zs0+CfH8nm PZtjBxNgEa7UQTtPPu0ZO01+p4lrz0hJwrg7fotxE5zz6ZdBpiD1bk0IzsM3CW5i8X9H/y xsYGb66b3/99zGqGJ4Lc9gPtimBNA5lR953I2BGEZ6SgqnHZ4L0ZpJQx7iNC3IfXWT2uqs QBmkBAhfSAFYsjZrpuHSR/xTBK4MPkC48Y2S4NooPo0ndbm1nd8qHTpKIZD+F3xy1byumO jInubYhqcVLXEtHzgo3KX1dgcOgeFtcNtEK6YKwGi/3l+SWJgNLSmVsMRbxzoA== Received: from gitrepo.freebsd.org (gitrepo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:5]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 4XZlP21bHNzT8w; Fri, 25 Oct 2024 14:22:46 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from gitrepo.freebsd.org ([127.0.1.44]) by gitrepo.freebsd.org (8.18.1/8.18.1) with ESMTP id 49PEMkV6033867; Fri, 25 Oct 2024 14:22:46 GMT (envelope-from git@gitrepo.freebsd.org) Received: (from git@localhost) by gitrepo.freebsd.org (8.18.1/8.18.1/Submit) id 49PEMk4Y033864; Fri, 25 Oct 2024 14:22:46 GMT (envelope-from git) Date: Fri, 25 Oct 2024 14:22:46 GMT Message-Id: <202410251422.49PEMk4Y033864@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: Zsolt Udvari Subject: git: 60ed4f2d3acf - main - math/R-cran-mnormt: new port List-Id: Commits to the main branch of the FreeBSD ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-main List-Help: List-Post: List-Subscribe: List-Unsubscribe: X-BeenThere: dev-commits-ports-main@freebsd.org Sender: owner-dev-commits-ports-main@FreeBSD.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: uzsolt X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: 60ed4f2d3acf2fe9d657e98f6e56bd1301abfb3e Auto-Submitted: auto-generated The branch main has been updated by uzsolt: URL: https://cgit.FreeBSD.org/ports/commit/?id=60ed4f2d3acf2fe9d657e98f6e56bd1301abfb3e commit 60ed4f2d3acf2fe9d657e98f6e56bd1301abfb3e Author: Zsolt Udvari AuthorDate: 2024-10-25 13:40:14 +0000 Commit: Zsolt Udvari CommitDate: 2024-10-25 14:22:38 +0000 math/R-cran-mnormt: new port Functions are provided for computing the density and the distribution function of d-dimensional normal and "t" random variables, possibly truncated (on one side or two sides), and for generating random vectors sampled from these distributions, except sampling from the truncated "t". Moments of arbitrary order of a multivariate truncated normal are computed, and converted to cumulants up to order 4. Probabilities are computed via non-Monte Carlo methods; different routines are used in the case d=1, d=2, d=3, d>3, if d denotes the dimensionality. Required by update of math/R-cran-psych. --- math/Makefile | 1 + math/R-cran-mnormt/Makefile | 15 +++++++++++++++ math/R-cran-mnormt/distinfo | 3 +++ math/R-cran-mnormt/pkg-descr | 8 ++++++++ 4 files changed, 27 insertions(+) diff --git a/math/Makefile b/math/Makefile index 6b9626e549fe..27e66e947eba 100644 --- a/math/Makefile +++ b/math/Makefile @@ -103,6 +103,7 @@ SUBDIR += R-cran-misc3d SUBDIR += R-cran-miscTools SUBDIR += R-cran-mitools + SUBDIR += R-cran-mnormt SUBDIR += R-cran-moments SUBDIR += R-cran-mvtnorm SUBDIR += R-cran-ncdf4 diff --git a/math/R-cran-mnormt/Makefile b/math/R-cran-mnormt/Makefile new file mode 100644 index 000000000000..bd2ee48f1739 --- /dev/null +++ b/math/R-cran-mnormt/Makefile @@ -0,0 +1,15 @@ +PORTNAME= mnormt +DISTVERSION= 2.1.1 +CATEGORIES= math +DISTNAME= ${PORTNAME}_${DISTVERSION} + +MAINTAINER= uzsolt@FreeBSD.org +COMMENT= Multivariate Normal and t Distributions +WWW= https://cran.r-project.org/web/packages/mnormt/index.html + +LICENSE= GPLv2 +LICENSE_FILE= ${WRKSRC}/COPYING + +USES= cran:auto-plist,compiles + +.include diff --git a/math/R-cran-mnormt/distinfo b/math/R-cran-mnormt/distinfo new file mode 100644 index 000000000000..4a407b60c8e0 --- /dev/null +++ b/math/R-cran-mnormt/distinfo @@ -0,0 +1,3 @@ +TIMESTAMP = 1729790783 +SHA256 (mnormt_2.1.1.tar.gz) = 95fca70378af0afd5a388982ba5528f5b27e02157eeb9940a0a9762d11511308 +SIZE (mnormt_2.1.1.tar.gz) = 65806 diff --git a/math/R-cran-mnormt/pkg-descr b/math/R-cran-mnormt/pkg-descr new file mode 100644 index 000000000000..392a083722fd --- /dev/null +++ b/math/R-cran-mnormt/pkg-descr @@ -0,0 +1,8 @@ +Functions are provided for computing the density and the distribution function +of d-dimensional normal and "t" random variables, possibly truncated (on one +side or two sides), and for generating random vectors sampled from these +distributions, except sampling from the truncated "t". Moments of arbitrary +order of a multivariate truncated normal are computed, and converted to +cumulants up to order 4. Probabilities are computed via non-Monte Carlo methods; +different routines are used in the case d=1, d=2, d=3, d>3, if d denotes the +dimensionality.