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Sat, 13 Jul 2024 18:35:29 GMT (envelope-from git) Date: Sat, 13 Jul 2024 18:35:29 GMT Message-Id: <202407131835.46DIZTJq074715@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: Yuri Victorovich Subject: git: c4faabf62b35 - main - biology/gatk: Prevent execution of git hooks from $DISTDIR during fetch List-Id: Commits to the main branch of the FreeBSD ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-main List-Help: List-Post: List-Subscribe: List-Unsubscribe: X-BeenThere: dev-commits-ports-main@freebsd.org Sender: owner-dev-commits-ports-main@FreeBSD.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: yuri X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: c4faabf62b358738e306b0ae712f61158c01086e Auto-Submitted: auto-generated The branch main has been updated by yuri: URL: https://cgit.FreeBSD.org/ports/commit/?id=c4faabf62b358738e306b0ae712f61158c01086e commit c4faabf62b358738e306b0ae712f61158c01086e Author: Yuri Victorovich AuthorDate: 2024-07-13 18:35:06 +0000 Commit: Yuri Victorovich CommitDate: 2024-07-13 18:35:06 +0000 biology/gatk: Prevent execution of git hooks from $DISTDIR during fetch --- biology/gatk/Makefile | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/biology/gatk/Makefile b/biology/gatk/Makefile index cbf0367d6a18..8b3f6e3a7572 100644 --- a/biology/gatk/Makefile +++ b/biology/gatk/Makefile @@ -63,7 +63,7 @@ do-fetch: ${MKDIR} ${WRKDIR}; \ HOME=${WRKDIR}; \ git config --global filter.lfs.smudge "git-lfs smudge -- %f" && \ - GIT_CLONE_PROTECTION_ACTIVE=false git clone -q https://github.com/broadinstitute/gatk.git ${PORTNAME}-${DISTVERSION} && \ + GIT_CLONE_PROTECTION_ACTIVE=false git clone -nq https://github.com/broadinstitute/gatk.git ${PORTNAME}-${DISTVERSION} && \ (cd ${PORTNAME}-${DISTVERSION} && git reset -q --hard ${DISTVERSION} && ${RM} -r .git) && \ ${RM} -r ${WRKDIR} \ ) && \