git: 44ec9c8c3f9d - main - biology/py-biom-format: update 2.1.10 → 2.1.16

The branch main has been updated by yuri:

URL: https://cgit.FreeBSD.org/ports/commit/?id=44ec9c8c3f9d00d60ab01d86e506635d1f3acb70

commit 44ec9c8c3f9d00d60ab01d86e506635d1f3acb70
Author:     Yuri Victorovich <yuri@FreeBSD.org>
AuthorDate: 2024-07-13 18:03:19 +0000
Commit:     Yuri Victorovich <yuri@FreeBSD.org>
CommitDate: 2024-07-13 18:06:57 +0000

    biology/py-biom-format: update 2.1.10 → 2.1.16
    
    PR:     279854
    Approved by:    Joseph Mingrone <jrm@freebsd.org> (maintainer)
---
 biology/py-biom-format/Makefile | 11 ++++-------
 biology/py-biom-format/distinfo |  6 +++---
 2 files changed, 7 insertions(+), 10 deletions(-)

diff --git a/biology/py-biom-format/Makefile b/biology/py-biom-format/Makefile
index b1432f4efde9..f0931e261767 100644
--- a/biology/py-biom-format/Makefile
+++ b/biology/py-biom-format/Makefile
@@ -1,6 +1,5 @@
 PORTNAME=	biom-format
-PORTVERSION=	2.1.10
-PORTREVISION=	1
+PORTVERSION=	2.1.16
 CATEGORIES=	biology python
 MASTER_SITES=	PYPI
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
@@ -14,14 +13,12 @@ LICENSE=	BSD3CLAUSE
 BUILD_DEPENDS=	${PYNUMPY}
 RUN_DEPENDS=	${PYTHON_PKGNAMEPREFIX}click>0:devel/py-click@${PY_FLAVOR} \
 		${PYNUMPY} \
-		${PYTHON_PKGNAMEPREFIX}future>=0.16.0:devel/py-future@${PY_FLAVOR} \
-		${PYTHON_PKGNAMEPREFIX}scipy>=1:science/py-scipy@${PY_FLAVOR} \
+		${PYTHON_PKGNAMEPREFIX}scipy>=1.3.1:science/py-scipy@${PY_FLAVOR} \
 		${PYTHON_PKGNAMEPREFIX}pandas>=0.20.0:math/py-pandas@${PY_FLAVOR} \
-		${PYTHON_PKGNAMEPREFIX}h5py>=2.2.0:science/py-h5py@${PY_FLAVOR} \
-		${PYTHON_PKGNAMEPREFIX}six>=1.10.0:devel/py-six@${PY_FLAVOR}
+		${PYTHON_PKGNAMEPREFIX}h5py>=2.2.0:science/py-h5py@${PY_FLAVOR}
 
 USES=		python
-USE_PYTHON=	autoplist concurrent cython distutils
+USE_PYTHON=	autoplist concurrent cython distutils pytest
 
 .include <bsd.port.pre.mk>
 
diff --git a/biology/py-biom-format/distinfo b/biology/py-biom-format/distinfo
index 8c8f7063441d..aeb31a00d278 100644
--- a/biology/py-biom-format/distinfo
+++ b/biology/py-biom-format/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1610333968
-SHA256 (biom-format-2.1.10.tar.gz) = f5a277a8144f0b114606852c42f657b9cfde44b3cefa0b2638ab1c1d5e1d0488
-SIZE (biom-format-2.1.10.tar.gz) = 11671341
+TIMESTAMP = 1718787972
+SHA256 (biom-format-2.1.16.tar.gz) = 47f88d57a94ecaa4d06f3578ca394e78db6d12e46ab0886634743181e67dcfc9
+SIZE (biom-format-2.1.16.tar.gz) = 11720476