git: e9af3287f78f - main - biology/py-scikit-bio: update 0.6.1 → 0.6.2

The branch main has been updated by yuri:

URL: https://cgit.FreeBSD.org/ports/commit/?id=e9af3287f78ff92d97f3094203e9c0fd50da4e1b

commit e9af3287f78ff92d97f3094203e9c0fd50da4e1b
Author:     Yuri Victorovich <yuri@FreeBSD.org>
AuthorDate: 2024-07-13 05:15:49 +0000
Commit:     Yuri Victorovich <yuri@FreeBSD.org>
CommitDate: 2024-07-13 05:17:53 +0000

    biology/py-scikit-bio: update 0.6.1 → 0.6.2
    
    Reported by:    portscout
---
 biology/py-scikit-bio/Makefile | 6 ++++--
 biology/py-scikit-bio/distinfo | 6 +++---
 2 files changed, 7 insertions(+), 5 deletions(-)

diff --git a/biology/py-scikit-bio/Makefile b/biology/py-scikit-bio/Makefile
index 67ae12a909ec..953b2c60e41b 100644
--- a/biology/py-scikit-bio/Makefile
+++ b/biology/py-scikit-bio/Makefile
@@ -1,5 +1,5 @@
 PORTNAME=	scikit-bio
-DISTVERSION=	0.6.1
+DISTVERSION=	0.6.2
 CATEGORIES=	biology education python
 MASTER_SITES=	PYPI
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
@@ -27,12 +27,14 @@ RUN_DEPENDS=	${PYTHON_PKGNAMEPREFIX}biom-format>0:biology/py-biom-format@${PY_FL
 		${PYTHON_PKGNAMEPREFIX}pandas>=1.5.0:math/py-pandas@${PY_FLAVOR} \
 		${PYTHON_PKGNAMEPREFIX}requests>=2.20.0:www/py-requests@${PY_FLAVOR} \
 		${PYTHON_PKGNAMEPREFIX}scikit-learn>=0.19.1:science/py-scikit-learn@${PY_FLAVOR} \
-		${PYTHON_PKGNAMEPREFIX}scipy>=1.9.0:science/py-scipy@${PY_FLAVOR}
+		${PYTHON_PKGNAMEPREFIX}scipy>=1.9.0:science/py-scipy@${PY_FLAVOR} \
+		${PYTHON_PKGNAMEPREFIX}statsmodels>=0.14.0:math/py-statsmodels@${PY_FLAVOR}
 
 USES=		python
 USE_PYTHON=	pep517 cython autoplist pytest # tests fail to run, see https://github.com/biocore/scikit-bio/issues/1846
 
 TEST_ENV=	${MAKE_ENV} PYTHONPATH=${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}
+TEST_WRKSRC=	${WRKSRC}/skbio/tests
 
 CONFLICTS_INSTALL=	${PYTHON_PKGNAMEPREFIX}ddtrace # lib/python3.8/site-packages/benchmarks/__init__.py
 
diff --git a/biology/py-scikit-bio/distinfo b/biology/py-scikit-bio/distinfo
index 97c19baf5398..fa11401cb467 100644
--- a/biology/py-scikit-bio/distinfo
+++ b/biology/py-scikit-bio/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1718789862
-SHA256 (scikit-bio-0.6.1.tar.gz) = 2f62d90fb44990d90593f2312398989c816081868c4cc6aedba170893f397b8c
-SIZE (scikit-bio-0.6.1.tar.gz) = 2683273
+TIMESTAMP = 1720838021
+SHA256 (scikit-bio-0.6.2.tar.gz) = af217ad12243cdaeef74a8f3bebe0d04aefda2a22d963d634201a36318b1a404
+SIZE (scikit-bio-0.6.2.tar.gz) = 2699488