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ESMTPS id 4TK95w5Mg3zZgD; Tue, 23 Jan 2024 14:51:48 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from gitrepo.freebsd.org ([127.0.1.44]) by gitrepo.freebsd.org (8.17.1/8.17.1) with ESMTP id 40NEpmSV082988; Tue, 23 Jan 2024 14:51:48 GMT (envelope-from git@gitrepo.freebsd.org) Received: (from git@localhost) by gitrepo.freebsd.org (8.17.1/8.17.1/Submit) id 40NEpm7H082985; Tue, 23 Jan 2024 14:51:48 GMT (envelope-from git) Date: Tue, 23 Jan 2024 14:51:48 GMT Message-Id: <202401231451.40NEpm7H082985@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: Muhammad Moinur Rahman Subject: git: 57d1705819c7 - main - biology/biolibc: Impelled to share/man List-Id: Commits to the main branch of the FreeBSD ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-main List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-dev-commits-ports-main@freebsd.org X-BeenThere: dev-commits-ports-main@freebsd.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: bofh X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: 57d1705819c717b8291562168b0f7f4948cde663 Auto-Submitted: auto-generated The branch main has been updated by bofh: URL: https://cgit.FreeBSD.org/ports/commit/?id=57d1705819c717b8291562168b0f7f4948cde663 commit 57d1705819c717b8291562168b0f7f4948cde663 Author: Muhammad Moinur Rahman AuthorDate: 2024-01-23 14:43:57 +0000 Commit: Muhammad Moinur Rahman CommitDate: 2024-01-23 14:51:25 +0000 biology/biolibc: Impelled to share/man Approved by: portmgr (blanket) --- biology/biolibc/Makefile | 3 + biology/biolibc/pkg-plist | 944 +++++++++++++++++++++++----------------------- 2 files changed, 475 insertions(+), 472 deletions(-) diff --git a/biology/biolibc/Makefile b/biology/biolibc/Makefile index af8a8764ef5d..954784150868 100644 --- a/biology/biolibc/Makefile +++ b/biology/biolibc/Makefile @@ -1,5 +1,6 @@ PORTNAME= biolibc DISTVERSION= 0.2.6 +PORTREVISION= 1 CATEGORIES= biology MAINTAINER= jwb@FreeBSD.org @@ -16,6 +17,8 @@ USE_LDCONFIG= yes GH_ACCOUNT= auerlab +MAKE_ARGS+= MANDIR=${PREFIX}/share/man + INSTALL_TARGET= install-strip pre-build: diff --git a/biology/biolibc/pkg-plist b/biology/biolibc/pkg-plist index ef546c985a07..a8b6a302ee2b 100644 --- a/biology/biolibc/pkg-plist +++ b/biology/biolibc/pkg-plist @@ -53,475 +53,475 @@ lib/libbiolibc.a lib/libbiolibc.so lib/libbiolibc.so.2 lib/libbiolibc.so.2.0 -man/man3/BL_ALIGN_MAX_MISMATCH_PERCENT.3.gz -man/man3/BL_ALIGN_MIN_MATCH.3.gz -man/man3/BL_BED_BLOCK_COUNT.3.gz -man/man3/BL_BED_BLOCK_SIZES.3.gz -man/man3/BL_BED_BLOCK_SIZES_AE.3.gz -man/man3/BL_BED_BLOCK_STARTS.3.gz -man/man3/BL_BED_BLOCK_STARTS_AE.3.gz -man/man3/BL_BED_CHROM.3.gz -man/man3/BL_BED_CHROM_AE.3.gz -man/man3/BL_BED_CHROM_END.3.gz -man/man3/BL_BED_CHROM_START.3.gz -man/man3/BL_BED_FIELDS.3.gz -man/man3/BL_BED_ITEM_RGB.3.gz 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-man/man3/BL_GFF_SCORE.3.gz -man/man3/BL_GFF_SEQID.3.gz -man/man3/BL_GFF_SEQID_AE.3.gz -man/man3/BL_GFF_SOURCE.3.gz -man/man3/BL_GFF_SOURCE_AE.3.gz -man/man3/BL_GFF_START.3.gz -man/man3/BL_GFF_STRAND.3.gz -man/man3/BL_GFF_TYPE.3.gz -man/man3/BL_GFF_TYPE_AE.3.gz -man/man3/BL_OVERLAP_FEATURE1_LEN.3.gz -man/man3/BL_OVERLAP_FEATURE2_LEN.3.gz -man/man3/BL_OVERLAP_OVERLAP_END.3.gz -man/man3/BL_OVERLAP_OVERLAP_LEN.3.gz -man/man3/BL_OVERLAP_OVERLAP_START.3.gz -man/man3/BL_POS_LIST_ARRAY_SIZE.3.gz -man/man3/BL_POS_LIST_COUNT.3.gz -man/man3/BL_POS_LIST_POSITIONS.3.gz -man/man3/BL_POS_LIST_POSITIONS_AE.3.gz -man/man3/BL_SAM_BUFF_ALIGNMENTS.3.gz -man/man3/BL_SAM_BUFF_ALIGNMENTS_AE.3.gz -man/man3/BL_SAM_BUFF_BUFFERED_COUNT.3.gz -man/man3/BL_SAM_BUFF_BUFF_SIZE.3.gz -man/man3/BL_SAM_BUFF_DISCARDED_ALIGNMENTS.3.gz -man/man3/BL_SAM_BUFF_DISCARDED_SCORE_SUM.3.gz -man/man3/BL_SAM_BUFF_DISCARDED_TRAILING.3.gz -man/man3/BL_SAM_BUFF_INC_DISCARDED_TRAILING.3.gz -man/man3/BL_SAM_BUFF_INC_TOTAL_ALIGNMENTS.3.gz 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+share/man/man3/bl_vcf_set_multi_sample_lens_cpy.3.gz +share/man/man3/bl_vcf_set_multi_sample_pointer_array_size.3.gz +share/man/man3/bl_vcf_set_multi_samples.3.gz +share/man/man3/bl_vcf_set_multi_samples_ae.3.gz +share/man/man3/bl_vcf_set_multi_samples_cpy.3.gz +share/man/man3/bl_vcf_set_other_count.3.gz +share/man/man3/bl_vcf_set_phred_buff_size.3.gz +share/man/man3/bl_vcf_set_phred_count.3.gz +share/man/man3/bl_vcf_set_phreds.3.gz +share/man/man3/bl_vcf_set_phreds_ae.3.gz +share/man/man3/bl_vcf_set_phreds_cpy.3.gz +share/man/man3/bl_vcf_set_pos.3.gz +share/man/man3/bl_vcf_set_qual_ae.3.gz +share/man/man3/bl_vcf_set_qual_cpy.3.gz +share/man/man3/bl_vcf_set_ref_ae.3.gz +share/man/man3/bl_vcf_set_ref_count.3.gz +share/man/man3/bl_vcf_set_ref_cpy.3.gz +share/man/man3/bl_vcf_set_single_sample.3.gz +share/man/man3/bl_vcf_set_single_sample_ae.3.gz +share/man/man3/bl_vcf_set_single_sample_array_size.3.gz +share/man/man3/bl_vcf_set_single_sample_cpy.3.gz +share/man/man3/bl_vcf_set_single_sample_len.3.gz *** 4 LINES SKIPPED ***