git: b131f401301c - main - science/nest: update 3.7 → 3.8

From: Yuri Victorovich <yuri_at_FreeBSD.org>
Date: Sat, 03 Aug 2024 08:27:45 UTC 
The branch main has been updated by yuri:

URL: https://cgit.FreeBSD.org/ports/commit/?id=b131f401301cf50a8c45ef7fe45db5d3332df081

commit b131f401301cf50a8c45ef7fe45db5d3332df081
Author:     Yuri Victorovich <yuri@FreeBSD.org>
AuthorDate: 2024-08-03 07:48:42 +0000
Commit:     Yuri Victorovich <yuri@FreeBSD.org>
CommitDate: 2024-08-03 08:27:30 +0000

    science/nest: update 3.7 → 3.8
    
    Reported by:    portscout
---
 science/nest/Makefile  |  2 +-
 science/nest/distinfo  |  6 +++---
 science/nest/pkg-plist | 18 ++++++++++++++----
 3 files changed, 18 insertions(+), 8 deletions(-)

diff --git a/science/nest/Makefile b/science/nest/Makefile
index 47f339630763..706db745b8f1 100644
--- a/science/nest/Makefile
+++ b/science/nest/Makefile
@@ -1,6 +1,6 @@
 PORTNAME=	nest
 DISTVERSIONPREFIX=	v
-DISTVERSION=	3.7
+DISTVERSION=	3.8
 CATEGORIES=	science biology # NEST is used in neuroscience
 
 MAINTAINER=	yuri@FreeBSD.org
diff --git a/science/nest/distinfo b/science/nest/distinfo
index 5a0a07a0d0fa..eb38c9085b0c 100644
--- a/science/nest/distinfo
+++ b/science/nest/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1713233105
-SHA256 (nest-nest-simulator-v3.7_GH0.tar.gz) = b313e03aa05a0d8053b895a1d14ea42e75805393c6daa0cbc62f9398d0dacd8b
-SIZE (nest-nest-simulator-v3.7_GH0.tar.gz) = 29639874
+TIMESTAMP = 1722665541
+SHA256 (nest-nest-simulator-v3.8_GH0.tar.gz) = eb255f8828be001abea0cddad2f14d78b70857fc82bece724551f27c698318c8
+SIZE (nest-nest-simulator-v3.8_GH0.tar.gz) = 30812352
diff --git a/science/nest/pkg-plist b/science/nest/pkg-plist
index 0ec1dfbcb29d..3dd892e8366f 100644
--- a/science/nest/pkg-plist
+++ b/science/nest/pkg-plist
@@ -146,6 +146,8 @@ include/nest/hh_psc_alpha_gap.h
 include/nest/histentry.h
 include/nest/ht_neuron.h
 include/nest/ht_synapse.h
+include/nest/iaf_bw_2001.h
+include/nest/iaf_bw_2001_exact.h
 include/nest/iaf_chs_2007.h
 include/nest/iaf_chxk_2008.h
 include/nest/iaf_cond_alpha.h
@@ -375,13 +377,13 @@ include/nest/weight_optimizer.h
 include/nest/weight_recorder.h
 lib/nest/libnest.so
 lib/nest/libnest.so.3
-lib/nest/libnest.so.3.7.0
+lib/nest/libnest.so.3.8.0
 lib/nest/libsli.so
 lib/nest/libsli.so.3
-lib/nest/libsli.so.3.7.0
+lib/nest/libsli.so.3.8.0
 lib/nest/libsli_readline.so
 lib/nest/libsli_readline.so.3
-lib/nest/libsli_readline.so.3.7.0
+lib/nest/libsli_readline.so.3.8.0
 %%PYTHON_SITELIBDIR%%/nest/__init__.py
 %%PYTHON_SITELIBDIR%%/nest/lib/README.md
 %%PYTHON_SITELIBDIR%%/nest/lib/__init__.py
@@ -561,10 +563,13 @@ lib/nest/libsli_readline.so.3.7.0
 %%DATADIR%%/testsuite/pytests/mpi/2/test_connect_pairwise_bernoulli.py
 %%DATADIR%%/testsuite/pytests/mpi/2/test_connect_symmetric_pairwise_bernoulli.py
 %%DATADIR%%/testsuite/pytests/mpi/2/test_issue_3099.py
+%%DATADIR%%/testsuite/pytests/mpi/2/test_issue_3108.py
 %%DATADIR%%/testsuite/pytests/mpi/2/test_issue_576.py
 %%DATADIR%%/testsuite/pytests/mpi/2/test_spatial_positions.py
 %%DATADIR%%/testsuite/pytests/mpi/2/test_synapsecollection_mpi.py
+%%DATADIR%%/testsuite/pytests/mpi/3/test_issue_3108.py
 %%DATADIR%%/testsuite/pytests/mpi/4/test_consistent_local_vps.py
+%%DATADIR%%/testsuite/pytests/mpi/4/test_issue_3108.py
 %%DATADIR%%/testsuite/pytests/mpi/4/test_set_status_resolution_nthreads.py
 %%DATADIR%%/testsuite/pytests/mpi/4/test_spatial_positions.py
 %%DATADIR%%/testsuite/pytests/mpi/4/test_spike_train_injector_mpi.py
@@ -718,10 +723,14 @@ lib/nest/libsli_readline.so.3.7.0
 %%DATADIR%%/testsuite/pytests/test_glif_psc.py
 %%DATADIR%%/testsuite/pytests/test_glif_psc_double_alpha.py
 %%DATADIR%%/testsuite/pytests/test_helper_functions.py
+%%DATADIR%%/testsuite/pytests/test_iaf_bw_2001.py
+%%DATADIR%%/testsuite/pytests/test_iaf_bw_2001_exact.py
 %%DATADIR%%/testsuite/pytests/test_iaf_ps_psp_accuracy.py
 %%DATADIR%%/testsuite/pytests/test_iaf_ps_psp_poisson_accuracy.py
 %%DATADIR%%/testsuite/pytests/test_iaf_singularity.py
 %%DATADIR%%/testsuite/pytests/test_ignore_and_fire_neuron.py
+%%DATADIR%%/testsuite/pytests/test_issue_3106.py
+%%DATADIR%%/testsuite/pytests/test_issue_3108.py
 %%DATADIR%%/testsuite/pytests/test_jonke_synapse.py
 %%DATADIR%%/testsuite/pytests/test_json.py
 %%DATADIR%%/testsuite/pytests/test_labeled_synapses.py
@@ -730,10 +739,10 @@ lib/nest/libsli_readline.so.3.7.0
 %%DATADIR%%/testsuite/pytests/test_mip_corrdet.py
 %%DATADIR%%/testsuite/pytests/test_multimeter.py
 %%DATADIR%%/testsuite/pytests/test_multiple_synapses.py
-%%DATADIR%%/testsuite/pytests/test_nodeParametrization.py
 %%DATADIR%%/testsuite/pytests/test_node_collection_indexing_slicing.py
 %%DATADIR%%/testsuite/pytests/test_node_collection_operations.py
 %%DATADIR%%/testsuite/pytests/test_node_collection_to_from_object.py
+%%DATADIR%%/testsuite/pytests/test_node_parametrization.py
 %%DATADIR%%/testsuite/pytests/test_onetooneconnect.py
 %%DATADIR%%/testsuite/pytests/test_ongrid_offgrid.py
 %%DATADIR%%/testsuite/pytests/test_parameter_operators.py
@@ -763,6 +772,7 @@ lib/nest/libsli_readline.so.3.7.0
 %%DATADIR%%/testsuite/pytests/test_regression_issue-2125.py
 %%DATADIR%%/testsuite/pytests/test_regression_issue-2480.py
 %%DATADIR%%/testsuite/pytests/test_regression_issue-3156.py
+%%DATADIR%%/testsuite/pytests/test_regression_issue-3213.py
 %%DATADIR%%/testsuite/pytests/test_sic_connection.py
 %%DATADIR%%/testsuite/pytests/test_siegert_neuron.py
 %%DATADIR%%/testsuite/pytests/test_sonata.py