git: 7336b01df94e - main - biology/checkm: update 1.2.0 → 1.2.2

The branch main has been updated by yuri:

URL: https://cgit.FreeBSD.org/ports/commit/?id=7336b01df94e8c216fd24aa4281eb9ccde44e7a2

commit 7336b01df94e8c216fd24aa4281eb9ccde44e7a2
Author:     Andrey Korobkov <alster@vinterdalen.se>
AuthorDate: 2024-04-23 08:39:42 +0000
Commit:     Yuri Victorovich <yuri@FreeBSD.org>
CommitDate: 2024-04-23 08:40:35 +0000

    biology/checkm: update 1.2.0 → 1.2.2
    
    PR:     278537
---
 biology/checkm/Makefile  |  3 +--
 biology/checkm/distinfo  |  6 +++---
 biology/checkm/pkg-descr | 21 +++++++++++----------
 3 files changed, 15 insertions(+), 15 deletions(-)

diff --git a/biology/checkm/Makefile b/biology/checkm/Makefile
index 2c4869be30d1..811a6de08dfb 100644
--- a/biology/checkm/Makefile
+++ b/biology/checkm/Makefile
@@ -1,7 +1,6 @@
 PORTNAME=	CheckM
 DISTVERSIONPREFIX=	v
-DISTVERSION=	1.2.0
-PORTREVISION=	1
+DISTVERSION=	1.2.2
 CATEGORIES=	biology python
 
 MAINTAINER=	yuri@FreeBSD.org
diff --git a/biology/checkm/distinfo b/biology/checkm/distinfo
index 3cf2dbad1752..733036b89632 100644
--- a/biology/checkm/distinfo
+++ b/biology/checkm/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1651427292
-SHA256 (Ecogenomics-CheckM-v1.2.0_GH0.tar.gz) = 9d2f51409a72e90f1b59c811fa4d8b430051683ca0f3001aa770003f9201cd71
-SIZE (Ecogenomics-CheckM-v1.2.0_GH0.tar.gz) = 1017160
+TIMESTAMP = 1713784123
+SHA256 (Ecogenomics-CheckM-v1.2.2_GH0.tar.gz) = a748b94e93f8d5fecfd0d5b3f17fcb119b25d4b45217e047b2fd742b21e74c0e
+SIZE (Ecogenomics-CheckM-v1.2.2_GH0.tar.gz) = 1017249
diff --git a/biology/checkm/pkg-descr b/biology/checkm/pkg-descr
index e97d294a9794..109aed5efe23 100644
--- a/biology/checkm/pkg-descr
+++ b/biology/checkm/pkg-descr
@@ -1,10 +1,11 @@
-CheckM provides a set of tools for assessing the quality of genomes recovered
-from isolates, single cells, or metagenomes. It provides robust estimates of
-genome completeness and contamination by using collocated sets of genes that
-are ubiquitous and single-copy within a phylogenetic lineage. Assessment of
-genome quality can also be examined using plots depicting key genomic
-characteristics (e.g., GC, coding density) which highlight sequences outside
-the expected distributions of a typical genome. CheckM also provides tools for
-identifying genome bins that are likely candidates for merging based on marker
-set compatibility, similarity in genomic characteristics, and proximity within
-a reference genome tree.
+CheckM provides a set of tools for assessing the quality of genomes
+recovered from isolates, single cells, or metagenomes.
+It provides robust estimates of genome completeness and contamination
+by using collocated sets of genes that are ubiquitous and single-copy
+within a phylogenetic lineage.
+Assessment of genome quality can also be examined using plots depicting
+key genomic characteristics (e.g., GC, coding density) which highlight
+sequences outside the expected distributions of a typical genome.
+CheckM also provides tools for identifying genome bins that are likely
+candidates for merging based on marker set compatibility, similarity in
+genomic characteristics, and proximity within a reference genome tree.