From nobody Sat Oct 28 11:53:00 2023 X-Original-To: dev-commits-ports-main@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4SHdFn3D50z4ymWV; Sat, 28 Oct 2023 11:53:01 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4SHdFn0LL8z4Z32; Sat, 28 Oct 2023 11:53:01 +0000 (UTC) (envelope-from git@FreeBSD.org) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1698493981; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=QTEuvmvlmTxtHAv9RHOm1mMMwsjKH6LtX6c2c/9N6S0=; b=q7a8k4y/OsRrQ6pR1Jt5G3NFD0TiYQ7w8oW1qWlEmrvgxasuiz4uuSxiNT+qf/HtnrRWe4 TQTTpRHiby89nr61Fv3EBQ5voXxn5INWSSdSTTTisyEAdKcqfVOdnM/TzPJZnTlFtZNNJt qObCGsaSE0hIFXSVu7OHoPSCnKuQ4Pfc/4SE5WtBK+xzgxFaAdb3ploQ4RgP0pXUj1nRK4 qCfpcYYF7cjmwbl/Xu0wGFAdOy4E2m4X73u5qUCRaWBcPaN3KjIVcB+btL1Eu97IJF3Y19 b+t6I1MWMfDmVMkrR/NtYRaUgEXnJrkIGd4b/i5MrfB+xJA15TbfIUWVHAwxdw== ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1698493981; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=QTEuvmvlmTxtHAv9RHOm1mMMwsjKH6LtX6c2c/9N6S0=; b=g62+bQ2b9lZSlAJYfMmGtgkPYt7rrgANQaby5sV56KACQe1wvrNQW8AAqHCMwlOH/7VNZ8 vhJDgHbF2PwlzNOjyG57HmBx+p7JbIEP+Q7t0kF0XWiMAjqRfJkr51w3Fd/6xfzEOUZtem KdTtxgMtTMK9W+N52+9Bv7X07UT8+EIFHijqXW2oS5Voqan/BCT5+See2aJNRRxo1A6QfW 4p09SjaD+WvJtlgFw8Pj+zvIS/MUMsx9N2oKImnUovMP68NYqlLfZYT4Hd4Pn3Lq3QK1iy Hl0hufp1GoSFlIDToy7kJ+pgYsOJ3iqVTvHJL3Uq7snJyiZUZC8yLqa+sYJs8g== ARC-Authentication-Results: i=1; mx1.freebsd.org; none ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1698493981; a=rsa-sha256; cv=none; b=upYyvcwQH5ANLaGFaktzPDq5SakDZhWCWVZXf9qybAlSYUoGf979rTkBMZIJDfePKIhg7n 3hhHOKGj2r75/Bd+UO0zq3WCKTJRD26L0Ri0I6maxPsWcXJZpqrNuzgY2G7jiLTEO5AkBp gg2ETAe5Zg0ZT7PTiNw2OCBHHrZchWG/VfX/g6KtAcGCevzscfN/YALtEsw1eD7MUFKifX MWXz8LcxzsVC27gUXvP2oox1y4DQgSUi/Se41nT6mrOogwEQB/Mw7KB0QbG5V7AxtdUvB0 IHrZ1tt9Q2hwyZdEwaZrnkVdXZjvPYNzivsn0bl6j0FsVhcFaeTiv4fJjfINnQ== Received: from gitrepo.freebsd.org (gitrepo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:5]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 4SHdFm6XngzvQF; Sat, 28 Oct 2023 11:53:00 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from gitrepo.freebsd.org ([127.0.1.44]) by gitrepo.freebsd.org (8.17.1/8.17.1) with ESMTP id 39SBr0Rg026818; Sat, 28 Oct 2023 11:53:00 GMT (envelope-from git@gitrepo.freebsd.org) Received: (from git@localhost) by gitrepo.freebsd.org (8.17.1/8.17.1/Submit) id 39SBr0b2026815; Sat, 28 Oct 2023 11:53:00 GMT (envelope-from git) Date: Sat, 28 Oct 2023 11:53:00 GMT Message-Id: <202310281153.39SBr0b2026815@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: "Jason W. Bacon" Subject: git: 87c04c6960c1 - main - biology/vcf2hap: Update to 0.1.6.7 List-Id: Commits to the main branch of the FreeBSD ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-main List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-dev-commits-ports-main@freebsd.org X-BeenThere: dev-commits-ports-main@freebsd.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: jwb X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: 87c04c6960c1877db7ae17ce92eced2c252d47b4 Auto-Submitted: auto-generated The branch main has been updated by jwb: URL: https://cgit.FreeBSD.org/ports/commit/?id=87c04c6960c1877db7ae17ce92eced2c252d47b4 commit 87c04c6960c1877db7ae17ce92eced2c252d47b4 Author: Jason W. Bacon AuthorDate: 2023-10-28 11:44:44 +0000 Commit: Jason W. Bacon CommitDate: 2023-10-28 11:44:44 +0000 biology/vcf2hap: Update to 0.1.6.7 Updates for new libxtend API --- biology/vcf2hap/Makefile | 3 ++- biology/vcf2hap/distinfo | 6 +++--- biology/vcf2hap/pkg-descr | 1 - 3 files changed, 5 insertions(+), 5 deletions(-) diff --git a/biology/vcf2hap/Makefile b/biology/vcf2hap/Makefile index fb903a18c741..eedf8861081a 100644 --- a/biology/vcf2hap/Makefile +++ b/biology/vcf2hap/Makefile @@ -1,5 +1,6 @@ PORTNAME= vcf2hap -DISTVERSION= 0.1.6 +DISTVERSION= 0.1.6-7 +DISTVERSIONSUFFIX= -gfda1765 CATEGORIES= biology MAINTAINER= jwb@FreeBSD.org diff --git a/biology/vcf2hap/distinfo b/biology/vcf2hap/distinfo index 70c5dd183115..4b3a003d0f9b 100644 --- a/biology/vcf2hap/distinfo +++ b/biology/vcf2hap/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1654952097 -SHA256 (auerlab-vcf2hap-0.1.6_GH0.tar.gz) = ab47cdf19d7d5e1cfb30ee530904814b08bf3266c5954a3dcb893d928792e166 -SIZE (auerlab-vcf2hap-0.1.6_GH0.tar.gz) = 201124 +TIMESTAMP = 1694019273 +SHA256 (auerlab-vcf2hap-0.1.6-7-gfda1765_GH0.tar.gz) = 614f4b3c2b1bb29bf52ed0eb3a6df64e8de9e16e651b503e10b9562193f308de +SIZE (auerlab-vcf2hap-0.1.6-7-gfda1765_GH0.tar.gz) = 201240 diff --git a/biology/vcf2hap/pkg-descr b/biology/vcf2hap/pkg-descr index adf304a3605c..0d3f7bc3d893 100644 --- a/biology/vcf2hap/pkg-descr +++ b/biology/vcf2hap/pkg-descr @@ -1,5 +1,4 @@ vcf2hap is a simple tool for generating a .hap file from a VCF. The .hap file is required by haplohseq. - vcf2hap is extremely fast and requires a trivial amount of memory regardless of the size of the VCF file.