git: e6eed9e9dfac - main - math/py-dgl: New port: Deep Graph Library
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Date: Wed, 10 May 2023 04:21:06 UTC
The branch main has been updated by yuri:
URL: https://cgit.FreeBSD.org/ports/commit/?id=e6eed9e9dfac32f38fe14a050c10a3b650ec9db9
commit e6eed9e9dfac32f38fe14a050c10a3b650ec9db9
Author: Yuri Victorovich <yuri@FreeBSD.org>
AuthorDate: 2023-05-10 04:20:04 +0000
Commit: Yuri Victorovich <yuri@FreeBSD.org>
CommitDate: 2023-05-10 04:21:01 +0000
math/py-dgl: New port: Deep Graph Library
---
math/Makefile | 1 +
math/py-dgl/Makefile | 75 ++++++++++++++++++++++
math/py-dgl/distinfo | 3 +
math/py-dgl/files/patch-dgl___ffi_base.py | 11 ++++
math/py-dgl/files/patch-dgl_sparse_____init____.py | 11 ++++
math/py-dgl/files/patch-setup.py | 20 ++++++
math/py-dgl/pkg-descr | 2 +
7 files changed, 123 insertions(+)
diff --git a/math/Makefile b/math/Makefile
index 89cacac3a106..8a575f445e3a 100644
--- a/math/Makefile
+++ b/math/Makefile
@@ -905,6 +905,7 @@
SUBDIR += py-cyipopt
SUBDIR += py-cypari2
SUBDIR += py-deap
+ SUBDIR += py-dgl
SUBDIR += py-dionysus
SUBDIR += py-disjoint-set
SUBDIR += py-docplex
diff --git a/math/py-dgl/Makefile b/math/py-dgl/Makefile
new file mode 100644
index 000000000000..29ca98e069fe
--- /dev/null
+++ b/math/py-dgl/Makefile
@@ -0,0 +1,75 @@
+PORTNAME= dgl
+DISTVERSION= 1.1.0
+CATEGORIES= math python
+PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
+
+MAINTAINER= yuri@FreeBSD.org
+COMMENT= Deep Graph Library
+WWW= https://www.dgl.ai/
+
+LICENSE= BSD3CLAUSE
+
+BUILD_DEPENDS= ${PY_SETUPTOOLS} \
+ ${PYTHON_PKGNAMEPREFIX}wheel>0:devel/py-wheel@${PY_FLAVOR} \
+ ${BACKEND_DEPENDS}
+LIB_DEPENDS= libdgl.so:math/dgl
+RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}networkx>=2.2:math/py-networkx@${PY_FLAVOR} \
+ ${PYNUMPY} \
+ ${PYTHON_PKGNAMEPREFIX}psutil>=5.8.0:sysutils/py-psutil@${PY_FLAVOR} \
+ ${PYTHON_PKGNAMEPREFIX}requests>=2.19.0:www/py-requests@${PY_FLAVOR} \
+ ${PYTHON_PKGNAMEPREFIX}scipy>=1.1.0:science/py-scipy@${PY_FLAVOR} \
+ ${PYTHON_PKGNAMEPREFIX}tqdm>0:misc/py-tqdm@${PY_FLAVOR} \
+ ${BACKEND_DEPENDS}
+
+USES= python:3.7+ localbase
+USE_PYTHON= distutils cython autoplist
+
+WRKSRC_SUBDIR= python
+
+USE_GITHUB= yes
+GH_ACCOUNT= dmlc
+
+MAKE_ENV= DGL_LIBRARY_PATH=${LOCALBASE}/lib
+
+POST_PLIST= rm-tests-from-plist
+
+OPTIONS_RADIO= BACKEND
+OPTIONS_RADIO_BACKEND= PYTORCH TENSORFLOW MXNET
+OPTIONS_DEFAULT= PYTORCH
+
+PYTORCH_DESC= Use PyTorch backend
+PYTORCH_VARS= BACKEND_DEPENDS=${PYTHON_PKGNAMEPREFIX}pytorch>0:misc/py-pytorch@${PY_FLAVOR}
+PYTORCH_MAKE_ENV= DGLBACKEND=pytorch
+
+TENSORFLOW_DESC= Use TensorFlow backend
+TENSORFLOW_VARS= BACKEND_DEPENDS=${PYTHON_PKGNAMEPREFIX}tensorflow>0:science/py-tensorflow@${PY_FLAVOR}
+TENSORFLOW_MAKE_ENV= DGLBACKEND=tensorflow
+
+MXNET_DESC= Use MXNET backend
+MXNET_VARS= BACKEND_DEPENDS=${PYTHON_PKGNAMEPREFIX}mxnet>0:misc/py-mxnet@${PY_FLAVOR}
+MXNET_MAKE_ENV= DGLBACKEND=mxnet
+
+post-install:
+ # workaround for https://github.com/dmlc/dgl/issues/5665
+ @${RM} ${STAGEDIR}${PREFIX}/dgl/libdgl.so
+ # remove empty dirs
+ @${RMDIR} \
+ ${STAGEDIR}${PREFIX}/dgl/tensoradapter/pytorch \
+ ${STAGEDIR}${PREFIX}/dgl/tensoradapter \
+ ${STAGEDIR}${PREFIX}/dgl/dgl_sparse \
+ ${STAGEDIR}${PREFIX}/dgl
+ # strip binaries
+ @${STRIP_CMD} ${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}/dgl/_ffi/_cy3/core${PYTHON_EXT_SUFFIX}.so
+
+rm-tests-from-plist:
+ # workaround for https://github.com/dmlc/dgl/issues/5665
+ @${REINPLACE_CMD} ' \
+ /dgl\/libdgl.so/d ; \
+ ' ${TMPPLIST}
+ # remove empty dirs
+ @${REINPLACE_CMD} ' \
+ /dgl\/tensoradapter\/pytorch/d ; \
+ /dgl\/dgl_sparse/d ; \
+ ' ${TMPPLIST}
+
+.include <bsd.port.mk>
diff --git a/math/py-dgl/distinfo b/math/py-dgl/distinfo
new file mode 100644
index 000000000000..df6d90d4640c
--- /dev/null
+++ b/math/py-dgl/distinfo
@@ -0,0 +1,3 @@
+TIMESTAMP = 1683572138
+SHA256 (dmlc-dgl-1.1.0_GH0.tar.gz) = 71c8ba7777ffdca37638bc796524d42c51006fad385967fa140235b60aac0252
+SIZE (dmlc-dgl-1.1.0_GH0.tar.gz) = 5536874
diff --git a/math/py-dgl/files/patch-dgl___ffi_base.py b/math/py-dgl/files/patch-dgl___ffi_base.py
new file mode 100644
index 000000000000..c602b49f29dc
--- /dev/null
+++ b/math/py-dgl/files/patch-dgl___ffi_base.py
@@ -0,0 +1,11 @@
+--- dgl/_ffi/base.py.orig 2023-05-09 03:27:48 UTC
++++ dgl/_ffi/base.py
+@@ -137,6 +137,8 @@ def load_tensor_adapter(backend, version):
+ version = version.split("+")[0]
+ if sys.platform.startswith("linux"):
+ basename = "libtensoradapter_%s_%s.so" % (backend, version)
++ elif sys.platform.startswith("freebsd"):
++ basename = "libtensoradapter_%s_%s.so" % (backend, version)
+ elif sys.platform.startswith("darwin"):
+ basename = "libtensoradapter_%s_%s.dylib" % (backend, version)
+ elif sys.platform.startswith("win"):
diff --git a/math/py-dgl/files/patch-dgl_sparse_____init____.py b/math/py-dgl/files/patch-dgl_sparse_____init____.py
new file mode 100644
index 000000000000..e4ef984e8187
--- /dev/null
+++ b/math/py-dgl/files/patch-dgl_sparse_____init____.py
@@ -0,0 +1,11 @@
+--- dgl/sparse/__init__.py.orig 2023-05-09 03:28:28 UTC
++++ dgl/sparse/__init__.py
+@@ -22,6 +22,8 @@ def load_dgl_sparse():
+
+ if sys.platform.startswith("linux"):
+ basename = f"libdgl_sparse_pytorch_{version}.so"
++ elif sys.platform.startswith("freebsd"):
++ basename = f"libdgl_sparse_pytorch_{version}.so"
+ elif sys.platform.startswith("darwin"):
+ basename = f"libdgl_sparse_pytorch_{version}.dylib"
+ elif sys.platform.startswith("win"):
diff --git a/math/py-dgl/files/patch-setup.py b/math/py-dgl/files/patch-setup.py
new file mode 100644
index 000000000000..91c3c627d541
--- /dev/null
+++ b/math/py-dgl/files/patch-setup.py
@@ -0,0 +1,20 @@
+--- setup.py.orig 2023-05-08 19:54:39 UTC
++++ setup.py
+@@ -49,6 +49,8 @@ def get_lib_path():
+ def get_ta_lib_pattern():
+ if sys.platform.startswith("linux"):
+ ta_lib_pattern = "libtensoradapter_*.so"
++ elif sys.platform.startswith("freebsd"):
++ ta_lib_pattern = "libtensoradapter_*.so"
+ elif sys.platform.startswith("darwin"):
+ ta_lib_pattern = "libtensoradapter_*.dylib"
+ elif sys.platform.startswith("win"):
+@@ -60,6 +62,8 @@ def get_ta_lib_pattern():
+
+ def get_dgl_sparse_pattern():
+ if sys.platform.startswith("linux"):
++ dgl_sparse_lib_pattern = "libdgl_sparse_*.so"
++ elif sys.platform.startswith("freebsd"):
+ dgl_sparse_lib_pattern = "libdgl_sparse_*.so"
+ elif sys.platform.startswith("darwin"):
+ dgl_sparse_lib_pattern = "libdgl_sparse_*.dylib"
diff --git a/math/py-dgl/pkg-descr b/math/py-dgl/pkg-descr
new file mode 100644
index 000000000000..459fb5664e85
--- /dev/null
+++ b/math/py-dgl/pkg-descr
@@ -0,0 +1,2 @@
+DGL is a Python package built to ease deep learning on graphs
+on top of existing DL frameworks.