git: 58e32a4b4b07 - main - science/py-hoomd-blue: Update 3.8.1 → 3.10.0

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From: Yuri Victorovich <yuri_at_FreeBSD.org>
Date: Fri, 17 Mar 2023 17:43:16 UTC
The branch main has been updated by yuri:

URL: https://cgit.FreeBSD.org/ports/commit/?id=58e32a4b4b07f802bb74f63142fc7a50c1c87c66

commit 58e32a4b4b07f802bb74f63142fc7a50c1c87c66
Author:     Yuri Victorovich <yuri@FreeBSD.org>
AuthorDate: 2023-03-17 15:19:13 +0000
Commit:     Yuri Victorovich <yuri@FreeBSD.org>
CommitDate: 2023-03-17 17:43:13 +0000

    science/py-hoomd-blue: Update 3.8.1 → 3.10.0
    
    Reported by:    portscout
---
 science/py-hoomd-blue/Makefile  |  4 +-
 science/py-hoomd-blue/distinfo  |  8 ++--
 science/py-hoomd-blue/pkg-plist | 95 ++---------------------------------------
 3 files changed, 7 insertions(+), 100 deletions(-)

diff --git a/science/py-hoomd-blue/Makefile b/science/py-hoomd-blue/Makefile
index e3ec332207ce..2cde7178708e 100644
--- a/science/py-hoomd-blue/Makefile
+++ b/science/py-hoomd-blue/Makefile
@@ -1,7 +1,6 @@
 PORTNAME=	hoomd-blue
 DISTVERSIONPREFIX=	v
-DISTVERSION=	3.8.1
-PORTREVISION=	1
+DISTVERSION=	3.10.0
 CATEGORIES=	science # physics
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
 
@@ -21,7 +20,6 @@ GH_ACCOUNT=	glotzerlab
 
 GH_TUPLE=	glotzerlab:upp11:0c1fb8d:glotzerlab_upp11/hoomd/extern/upp11 \
 		glotzerlab:nano-signal-slot:34223a4:glotzerlab_nano_signal_slot/hoomd/extern/nano-signal-slot \
-		glotzerlab:cub:c3cceac115c072fb63df1836ff46d8c60d9eb304:glotzerlab_cub/hoomd/extern/cub \
 		glotzerlab:quickhull:a706b5b:glotzerlab_quickhull/hoomd/extern/quickhull \
 		glotzerlab:random123:a2c4f04:glotzerlab_random123/hoomd/extern/random123 \
 		glotzerlab:HIP:d211f99:glotzerlab_HIP/hoomd/extern/HIP \
diff --git a/science/py-hoomd-blue/distinfo b/science/py-hoomd-blue/distinfo
index e6c28d67ac91..1175925bfe6f 100644
--- a/science/py-hoomd-blue/distinfo
+++ b/science/py-hoomd-blue/distinfo
@@ -1,12 +1,10 @@
-TIMESTAMP = 1675148596
-SHA256 (glotzerlab-hoomd-blue-v3.8.1_GH0.tar.gz) = e794bfd1579c68a04f931162d32f1b3b3272b4439212d9c03ea855b02ed367c9
-SIZE (glotzerlab-hoomd-blue-v3.8.1_GH0.tar.gz) = 2838968
+TIMESTAMP = 1679071482
+SHA256 (glotzerlab-hoomd-blue-v3.10.0_GH0.tar.gz) = 3aa21329e02b7f8e5fafca2430014b31eb254bd1e0e5bad5a325387229ad48cc
+SIZE (glotzerlab-hoomd-blue-v3.10.0_GH0.tar.gz) = 2843197
 SHA256 (glotzerlab-upp11-0c1fb8d_GH0.tar.gz) = fe9db1b06fd504876e243c9031a594edbd0323e8337f908885f31cc980f642e9
 SIZE (glotzerlab-upp11-0c1fb8d_GH0.tar.gz) = 21024
 SHA256 (glotzerlab-nano-signal-slot-34223a4_GH0.tar.gz) = bfe51f7dd2cc097b70202f849c1a42a13ea5f53a1e902e053df155c3a157c30b
 SIZE (glotzerlab-nano-signal-slot-34223a4_GH0.tar.gz) = 4747
-SHA256 (glotzerlab-cub-c3cceac115c072fb63df1836ff46d8c60d9eb304_GH0.tar.gz) = ecb8b5b7c2e9493b1661cf023b29edcf5cdb80de7033e90f286501251e293b97
-SIZE (glotzerlab-cub-c3cceac115c072fb63df1836ff46d8c60d9eb304_GH0.tar.gz) = 385598
 SHA256 (glotzerlab-quickhull-a706b5b_GH0.tar.gz) = 3d3058837e7bc0c8c2e84a30c2de2ad7bf8c13ad2a0001eee706e38d80a2e795
 SIZE (glotzerlab-quickhull-a706b5b_GH0.tar.gz) = 15845
 SHA256 (glotzerlab-random123-a2c4f04_GH0.tar.gz) = 9d24475b2544cfe9cf9c1f2fc43e811d8861869b1ec0ee9b8bf7586c27e06007
diff --git a/science/py-hoomd-blue/pkg-plist b/science/py-hoomd-blue/pkg-plist
index a68a5321d486..ff19aa1be520 100644
--- a/science/py-hoomd-blue/pkg-plist
+++ b/science/py-hoomd-blue/pkg-plist
@@ -91,6 +91,8 @@ lib/cmake/hoomd/hoomd-targets.cmake
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/BondedGroupData.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/BoxDim.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/BoxResizeUpdater.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/BoxResizeUpdaterGPU.cuh
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/BoxResizeUpdaterGPU.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/CachedAllocator.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/CellList.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/CellListGPU.cuh
@@ -286,98 +288,6 @@ lib/cmake/hoomd/hoomd-targets.cmake
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/HIP/tests/src/runtimeApi/stream/hipStream.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/HIP/tests/src/test_common.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/_kiss_fft_guts.h
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/agent/agent_histogram.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/agent/agent_radix_sort_downsweep.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/agent/agent_radix_sort_upsweep.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/agent/agent_reduce.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/agent/agent_reduce_by_key.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/agent/agent_rle.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/agent/agent_scan.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/agent/agent_segment_fixup.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/agent/agent_select_if.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/agent/agent_spmv_orig.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/agent/single_pass_scan_operators.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/block/block_adjacent_difference.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/block/block_discontinuity.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/block/block_exchange.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/block/block_histogram.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/block/block_load.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/block/block_radix_rank.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/block/block_radix_sort.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/block/block_raking_layout.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/block/block_reduce.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/block/block_scan.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/block/block_shuffle.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/block/block_store.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/block/specializations/block_histogram_atomic.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/block/specializations/block_histogram_sort.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/block/specializations/block_reduce_raking.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/block/specializations/block_reduce_raking_commutative_only.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/block/specializations/block_reduce_warp_reductions.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/block/specializations/block_scan_raking.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/block/specializations/block_scan_warp_scans.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/block/specializations/block_scan_warp_scans2.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/block/specializations/block_scan_warp_scans3.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/cub.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/device/device_histogram.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/device/device_partition.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/device/device_radix_sort.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/device/device_reduce.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/device/device_run_length_encode.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/device/device_scan.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/device/device_segmented_radix_sort.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/device/device_segmented_reduce.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/device/device_select.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/device/device_spmv.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/device/dispatch/dispatch_histogram.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/device/dispatch/dispatch_radix_sort.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/device/dispatch/dispatch_reduce.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/device/dispatch/dispatch_reduce_by_key.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/device/dispatch/dispatch_rle.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/device/dispatch/dispatch_scan.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/device/dispatch/dispatch_select_if.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/device/dispatch/dispatch_spmv_orig.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/grid/grid_barrier.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/grid/grid_even_share.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/grid/grid_mapping.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/grid/grid_queue.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/host/mutex.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/iterator/arg_index_input_iterator.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/iterator/cache_modified_input_iterator.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/iterator/cache_modified_output_iterator.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/iterator/constant_input_iterator.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/iterator/counting_input_iterator.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/iterator/discard_output_iterator.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/iterator/tex_obj_input_iterator.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/iterator/tex_ref_input_iterator.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/iterator/transform_input_iterator.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/thread/thread_load.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/thread/thread_operators.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/thread/thread_reduce.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/thread/thread_scan.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/thread/thread_search.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/thread/thread_store.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/util_allocator.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/util_arch.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/util_debug.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/util_device.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/util_macro.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/util_namespace.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/util_ptx.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/util_type.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/warp/specializations/warp_reduce_shfl.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/warp/specializations/warp_reduce_smem.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/warp/specializations/warp_scan_shfl.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/warp/specializations/warp_scan_smem.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/warp/warp_reduce.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/cub/warp/warp_scan.cuh
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/experimental/histogram/histogram_cub.h
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/experimental/histogram/histogram_gmem_atomics.h
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/experimental/histogram/histogram_smem_atomics.h
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/experimental/sparse_matrix.h
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/test/half.h
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/test/mersenne.h
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cub/test/test_util.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cudacpu_host_defines.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cudacpu_vector_functions.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/cudacpu_vector_types.h
@@ -650,6 +560,7 @@ lib/cmake/hoomd/hoomd-targets.cmake
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/EvaluatorPairDPDThermoLJ.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/EvaluatorPairDipole.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/EvaluatorPairEwald.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/EvaluatorPairExpandedGaussian.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/EvaluatorPairExpandedLJ.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/EvaluatorPairExpandedMie.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/md/EvaluatorPairForceShiftedLJ.h