git: 749238be2812 - main - science/gromacs: Update 2022.4 → 2023.1

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From: Yuri Victorovich <yuri_at_FreeBSD.org>
Date: Tue, 13 Jun 2023 23:21:59 UTC
The branch main has been updated by yuri:

URL: https://cgit.FreeBSD.org/ports/commit/?id=749238be28124aedc285ab581952d082a4dce819

commit 749238be28124aedc285ab581952d082a4dce819
Author:     Yuri Victorovich <yuri@FreeBSD.org>
AuthorDate: 2023-06-13 23:21:41 +0000
Commit:     Yuri Victorovich <yuri@FreeBSD.org>
CommitDate: 2023-06-13 23:21:55 +0000

    science/gromacs: Update 2022.4 → 2023.1
    
    Reported by:    portscout
---
 science/gromacs/Makefile  |  3 +--
 science/gromacs/distinfo  |  6 +++---
 science/gromacs/pkg-plist | 44 ++++++++++++++++++++++----------------------
 3 files changed, 26 insertions(+), 27 deletions(-)

diff --git a/science/gromacs/Makefile b/science/gromacs/Makefile
index a920ac7ee605..db995e99b4bc 100644
--- a/science/gromacs/Makefile
+++ b/science/gromacs/Makefile
@@ -1,6 +1,5 @@
 PORTNAME=	gromacs
-DISTVERSION=	2022.4
-PORTREVISION=	1
+DISTVERSION=	2023.1
 CATEGORIES=	science
 MASTER_SITES=	ftp://ftp.gromacs.org/pub/gromacs/
 
diff --git a/science/gromacs/distinfo b/science/gromacs/distinfo
index 8686cb58bbdb..fc8cfcac4e90 100644
--- a/science/gromacs/distinfo
+++ b/science/gromacs/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1672035451
-SHA256 (gromacs-2022.4.tar.gz) = c511be602ff29402065b50906841def98752639b92a95f1b0a1060d9b5e27297
-SIZE (gromacs-2022.4.tar.gz) = 40352282
+TIMESTAMP = 1686691420
+SHA256 (gromacs-2023.1.tar.gz) = eef2bb4a6cb6314cf9da47f26df2a0d27af4bf7b3099723d43601073ab0a42f4
+SIZE (gromacs-2023.1.tar.gz) = 41934072
diff --git a/science/gromacs/pkg-plist b/science/gromacs/pkg-plist
index 950e48129744..0cb8e4801e7b 100644
--- a/science/gromacs/pkg-plist
+++ b/science/gromacs/pkg-plist
@@ -24,7 +24,6 @@ include/gmxapi/session/resources.h
 include/gmxapi/status.h
 include/gmxapi/system.h
 include/gmxapi/version.h
-%%LEGACY%%include/gromacs/analysisdata.h
 %%LEGACY%%include/gromacs/analysisdata/abstractdata.h
 %%LEGACY%%include/gromacs/analysisdata/analysisdata.h
 %%LEGACY%%include/gromacs/analysisdata/arraydata.h
@@ -43,17 +42,16 @@ include/gmxapi/version.h
 %%LEGACY%%include/gromacs/fileio/pdbio.h
 %%LEGACY%%include/gromacs/fileio/tpxio.h
 %%LEGACY%%include/gromacs/fileio/trxio.h
-include/gromacs/libgromacs_export.h
-include/gromacs/math/do_fit.h
-include/gromacs/math/functions.h
-include/gromacs/math/units.h
-include/gromacs/math/utilities.h
-include/gromacs/math/vec.h
-include/gromacs/math/vectypes.h
+%%LEGACY%%include/gromacs/libgromacs_export.h
+%%LEGACY%%include/gromacs/math/do_fit.h
+%%LEGACY%%include/gromacs/math/functions.h
+%%LEGACY%%include/gromacs/math/units.h
+%%LEGACY%%include/gromacs/math/utilities.h
+%%LEGACY%%include/gromacs/math/vec.h
+%%LEGACY%%include/gromacs/math/vectypes.h
 include/gromacs/mdrun/simulationinputhandle.h
 %%LEGACY%%include/gromacs/mdtypes/inputrec.h
 %%LEGACY%%include/gromacs/mdtypes/md_enums.h
-%%LEGACY%%include/gromacs/options.h
 %%LEGACY%%include/gromacs/options/abstractoption.h
 %%LEGACY%%include/gromacs/options/basicoptions.h
 %%LEGACY%%include/gromacs/options/filenameoption.h
@@ -67,8 +65,7 @@ include/gromacs/mdrun/simulationinputhandle.h
 %%LEGACY%%include/gromacs/options/options.h
 %%LEGACY%%include/gromacs/options/timeunitmanager.h
 %%LEGACY%%include/gromacs/pbcutil/pbc.h
-include/gromacs/restraint/restraintpotential.h
-%%LEGACY%%include/gromacs/selection.h
+%%LEGACY%%include/gromacs/restraint/restraintpotential.h
 %%LEGACY%%include/gromacs/selection/indexutil.h
 %%LEGACY%%include/gromacs/selection/nbsearch.h
 %%LEGACY%%include/gromacs/selection/position.h
@@ -87,28 +84,28 @@ include/gromacs/restraint/restraintpotential.h
 %%LEGACY%%include/gromacs/topology/index.h
 %%LEGACY%%include/gromacs/topology/symtab.h
 %%LEGACY%%include/gromacs/topology/topology.h
+%%LEGACY%%include/gromacs/topology/topology_enums.h
 %%LEGACY%%include/gromacs/trajectory/trajectoryframe.h
-%%LEGACY%%include/gromacs/trajectoryanalysis.h
 %%LEGACY%%include/gromacs/trajectoryanalysis/analysismodule.h
 %%LEGACY%%include/gromacs/trajectoryanalysis/analysissettings.h
 %%LEGACY%%include/gromacs/trajectoryanalysis/cmdlinerunner.h
 %%LEGACY%%include/gromacs/trajectoryanalysis/topologyinformation.h
 %%LEGACY%%include/gromacs/utility/arrayref.h
-include/gromacs/utility/basedefinitions.h
+%%LEGACY%%include/gromacs/utility/basedefinitions.h
 %%LEGACY%%include/gromacs/utility/baseversion.h
 %%LEGACY%%include/gromacs/utility/classhelpers.h
-include/gromacs/utility/current_function.h
+%%LEGACY%%include/gromacs/utility/current_function.h
 %%LEGACY%%include/gromacs/utility/enumerationhelpers.h
 %%LEGACY%%include/gromacs/utility/exceptions.h
 %%LEGACY%%include/gromacs/utility/fileptr.h
 %%LEGACY%%include/gromacs/utility/flags.h
 %%LEGACY%%include/gromacs/utility/futil.h
-include/gromacs/utility/gmxassert.h
+%%LEGACY%%include/gromacs/utility/gmxassert.h
 %%LEGACY%%include/gromacs/utility/listoflists.h
 %%LEGACY%%include/gromacs/utility/pleasecite.h
 %%LEGACY%%include/gromacs/utility/programcontext.h
 %%LEGACY%%include/gromacs/utility/range.h
-include/gromacs/utility/real.h
+%%LEGACY%%include/gromacs/utility/real.h
 %%LEGACY%%include/gromacs/utility/smalloc.h
 %%LEGACY%%include/gromacs/utility/stringutil.h
 %%LEGACY%%include/gromacs/utility/unique_cptr.h
@@ -148,15 +145,19 @@ include/nblib/util/setup.h
 include/nblib/util/traits.hpp
 include/nblib/util/util.hpp
 include/nblib/vector.h
+lib/cmake/muparser/muparser-targets-%%CMAKE_BUILD_TYPE%%.cmake
+lib/cmake/muparser/muparser-targets.cmake
+lib/cmake/muparser/muparserConfig.cmake
+lib/cmake/muparser/muparserConfigVersion.cmake
 lib/libgmxapi%%SUFFIX_D%%.so
 lib/libgmxapi%%SUFFIX_D%%.so.0
-lib/libgmxapi%%SUFFIX_D%%.so.0.3.1
+lib/libgmxapi%%SUFFIX_D%%.so.0.4.0
 lib/libgromacs%%SUFFIX_D%%.so
-lib/libgromacs%%SUFFIX_D%%.so.7
-lib/libgromacs%%SUFFIX_D%%.so.7.0.0
+lib/libgromacs%%SUFFIX_D%%.so.8
+lib/libgromacs%%SUFFIX_D%%.so.8.0.0
 lib/libmuparser.so
 lib/libmuparser.so.2
-lib/libmuparser.so.2.3.2
+lib/libmuparser.so.2.3.4
 lib/libnblib_gmx.so
 lib/libnblib_gmx.so.0
 lib/libnblib_gmx.so.0.1.0
@@ -641,8 +642,8 @@ share/man/man1/gmx-dielectric.1.gz
 share/man/man1/gmx-dipoles.1.gz
 share/man/man1/gmx-disre.1.gz
 share/man/man1/gmx-distance.1.gz
-share/man/man1/gmx-do_dssp.1.gz
 share/man/man1/gmx-dos.1.gz
+share/man/man1/gmx-dssp.1.gz
 share/man/man1/gmx-dump.1.gz
 share/man/man1/gmx-dyecoupl.1.gz
 share/man/man1/gmx-editconf.1.gz
@@ -713,7 +714,6 @@ share/man/man1/gmx-trjorder.1.gz
 share/man/man1/gmx-tune_pme.1.gz
 share/man/man1/gmx-vanhove.1.gz
 share/man/man1/gmx-velacc.1.gz
-share/man/man1/gmx-view.1.gz
 share/man/man1/gmx-wham.1.gz
 share/man/man1/gmx-wheel.1.gz
 share/man/man1/gmx-x2top.1.gz