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Wed, 19 Jul 2023 18:26:13 GMT (envelope-from git) Date: Wed, 19 Jul 2023 18:26:13 GMT Message-Id: <202307191826.36JIQD9X016841@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: Yuri Victorovich Subject: git: eadc22643b6c - main - biology/mashmap: Broken on i386; Fix build on other architectures by using NATIVE option List-Id: Commits to the main branch of the FreeBSD ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-main List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-dev-commits-ports-main@freebsd.org X-BeenThere: dev-commits-ports-main@freebsd.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: yuri X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: eadc22643b6c207a6ee109f82ff42f6e7d401521 Auto-Submitted: auto-generated The branch main has been updated by yuri: URL: https://cgit.FreeBSD.org/ports/commit/?id=eadc22643b6c207a6ee109f82ff42f6e7d401521 commit eadc22643b6c207a6ee109f82ff42f6e7d401521 Author: Yuri Victorovich AuthorDate: 2023-07-18 13:59:18 +0000 Commit: Yuri Victorovich CommitDate: 2023-07-19 18:26:06 +0000 biology/mashmap: Broken on i386; Fix build on other architectures by using NATIVE option Reported by: fallout --- biology/mashmap/Makefile | 7 +++++++ 1 file changed, 7 insertions(+) diff --git a/biology/mashmap/Makefile b/biology/mashmap/Makefile index d9dc5f5fafa4..b1be9f3f6461 100644 --- a/biology/mashmap/Makefile +++ b/biology/mashmap/Makefile @@ -1,6 +1,7 @@ PORTNAME= mashmap DISTVERSIONPREFIX= v DISTVERSION= 3.0.6 +PORTREVISION= 1 CATEGORIES= biology MAINTAINER= yuri@FreeBSD.org @@ -10,6 +11,8 @@ WWW= https://github.com/marbl/MashMap LICENSE= PD LICENSE_FILE= ${WRKSRC}/LICENSE.txt +BROKEN_i386= compilation fails: fatal error: unknown type name '__uint128_t' + LIB_DEPENDS= libgsl.so:math/gsl USES= cmake compiler:c++17-lang localbase:ldflags @@ -18,6 +21,10 @@ USE_GITHUB= yes GH_ACCOUNT= marbl GH_PROJECT= MashMap +OPTIONS_DEFINE= NATIVE + +NATIVE_CMAKE_BOOL= OPTIMIZE_FOR_NATIVE + PLIST_FILES= bin/mashmap \ bin/mashmap-align