git: adfc9433b02c - main - biology/bcftools: Update to 1.16
- Go to: [ bottom of page ] [ top of archives ] [ this month ]
Date: Thu, 05 Jan 2023 23:21:37 UTC
The branch main has been updated by jwb: URL: https://cgit.FreeBSD.org/ports/commit/?id=adfc9433b02c9fbd48a51de471dc4f43a22d240f commit adfc9433b02c9fbd48a51de471dc4f43a22d240f Author: Jason W. Bacon <jwb@FreeBSD.org> AuthorDate: 2023-01-05 23:19:22 +0000 Commit: Jason W. Bacon <jwb@FreeBSD.org> CommitDate: 2023-01-05 23:19:22 +0000 biology/bcftools: Update to 1.16 New plugin variant-distance to annotate records with distance to the nearest variant Numerous minor enhancements and bug fixes Changes: https://github.com/samtools/bcftools/releases --- biology/bcftools/Makefile | 2 +- biology/bcftools/distinfo | 6 +++--- biology/bcftools/pkg-plist | 1 + 3 files changed, 5 insertions(+), 4 deletions(-) diff --git a/biology/bcftools/Makefile b/biology/bcftools/Makefile index fcea2008869c..0f6c3ba013e0 100644 --- a/biology/bcftools/Makefile +++ b/biology/bcftools/Makefile @@ -1,5 +1,5 @@ PORTNAME= bcftools -PORTVERSION= 1.15 +PORTVERSION= 1.16 CATEGORIES= biology MAINTAINER= jwb@FreeBSD.org diff --git a/biology/bcftools/distinfo b/biology/bcftools/distinfo index 7f2539d1f09b..0ff5fb7eef59 100644 --- a/biology/bcftools/distinfo +++ b/biology/bcftools/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1645831748 -SHA256 (samtools-bcftools-1.15_GH0.tar.gz) = 6b263270c62b156d2604150ca7e64b06a80282e049759b2668de24cbce1b1946 -SIZE (samtools-bcftools-1.15_GH0.tar.gz) = 3347901 +TIMESTAMP = 1672094717 +SHA256 (samtools-bcftools-1.16_GH0.tar.gz) = c44c85a04e058e1f1eceeb712106031100bbd700b8ff3f623f7ff872469a4ba3 +SIZE (samtools-bcftools-1.16_GH0.tar.gz) = 3432435 diff --git a/biology/bcftools/pkg-plist b/biology/bcftools/pkg-plist index 11f94eafff86..0a24964f9656 100644 --- a/biology/bcftools/pkg-plist +++ b/biology/bcftools/pkg-plist @@ -43,5 +43,6 @@ libexec/bcftools/tag2tag.so libexec/bcftools/trio-dnm2.so libexec/bcftools/trio-stats.so libexec/bcftools/trio-switch-rate.so +libexec/bcftools/variant-distance.so libexec/bcftools/variantkey-hex.so man/man1/bcftools.1.gz