From nobody Tue Jan 03 00:37:22 2023 X-Original-To: dev-commits-ports-main@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4NmDMl10GTz2nwsr; Tue, 3 Jan 2023 00:37:23 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4NmDMl0CvKz4PjQ; Tue, 3 Jan 2023 00:37:23 +0000 (UTC) (envelope-from git@FreeBSD.org) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1672706243; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: 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ESMTPS id 4NmDMk5fWVz1RM0; Tue, 3 Jan 2023 00:37:22 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from gitrepo.freebsd.org ([127.0.1.44]) by gitrepo.freebsd.org (8.16.1/8.16.1) with ESMTP id 3030bM7e029928; Tue, 3 Jan 2023 00:37:22 GMT (envelope-from git@gitrepo.freebsd.org) Received: (from git@localhost) by gitrepo.freebsd.org (8.16.1/8.16.1/Submit) id 3030bMfY029927; Tue, 3 Jan 2023 00:37:22 GMT (envelope-from git) Date: Tue, 3 Jan 2023 00:37:22 GMT Message-Id: <202301030037.3030bMfY029927@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: Yuri Victorovich Subject: git: fad1543e2849 - main - textproc/biodiff: New port: Hex diff viewer using alignment algorithms from biology List-Id: Commits to the main branch of the FreeBSD ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-main List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-dev-commits-ports-main@freebsd.org X-BeenThere: dev-commits-ports-main@freebsd.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: yuri X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: fad1543e28490619581688752e915def76aee5c7 Auto-Submitted: auto-generated X-ThisMailContainsUnwantedMimeParts: N The branch main has been updated by yuri: URL: https://cgit.FreeBSD.org/ports/commit/?id=fad1543e28490619581688752e915def76aee5c7 commit fad1543e28490619581688752e915def76aee5c7 Author: Yuri Victorovich AuthorDate: 2023-01-02 23:02:16 +0000 Commit: Yuri Victorovich CommitDate: 2023-01-03 00:37:13 +0000 textproc/biodiff: New port: Hex diff viewer using alignment algorithms from biology --- textproc/Makefile | 1 + textproc/biodiff/Makefile | 169 ++++++++++++++++++++++++++ textproc/biodiff/distinfo | 287 +++++++++++++++++++++++++++++++++++++++++++++ textproc/biodiff/pkg-descr | 10 ++ 4 files changed, 467 insertions(+) diff --git a/textproc/Makefile b/textproc/Makefile index 24dc57dc25bc..6077cd553287 100644 --- a/textproc/Makefile +++ b/textproc/Makefile @@ -79,6 +79,7 @@ SUBDIR += bibtex2html SUBDIR += bibtool SUBDIR += bibutils + SUBDIR += biodiff SUBDIR += bn-aspell SUBDIR += br-aspell SUBDIR += bsddiff diff --git a/textproc/biodiff/Makefile b/textproc/biodiff/Makefile new file mode 100644 index 000000000000..284f1dac479e --- /dev/null +++ b/textproc/biodiff/Makefile @@ -0,0 +1,169 @@ +PORTNAME= biodiff +DISTVERSIONPREFIX= v +DISTVERSION= 1.0.3 +CATEGORIES= textproc + +MAINTAINER= yuri@FreeBSD.org +COMMENT= Hex diff viewer using alignment algorithms from biology +WWW= https://github.com/8051Enthusiast/biodiff + +LICENSE= MIT +LICENSE_FILE= ${WRKSRC}/LICENSE + +USES= cargo + +USE_GITHUB= yes +GH_ACCOUNT= 8051Enthusiast + +CARGO_CRATES= ahash-0.7.6 \ + aho-corasick-0.7.18 \ + anyhow-1.0.58 \ + approx-0.5.1 \ + autocfg-1.1.0 \ + bio-0.41.0 \ + bio-types-0.12.1 \ + bit-set-0.5.2 \ + bit-vec-0.6.3 \ + bitflags-1.3.2 \ + bstr-0.2.17 \ + bv-0.11.1 \ + bytecount-0.6.3 \ + byteorder-1.4.3 \ + cfg-if-1.0.0 \ + crossbeam-channel-0.5.5 \ + crossbeam-utils-0.8.10 \ + crossterm-0.24.0 \ + crossterm_winapi-0.9.0 \ + csv-1.1.6 \ + csv-core-0.1.10 \ + cursive-0.19.0 \ + cursive_buffered_backend-0.6.0 \ + cursive_core-0.3.4 \ + custom_derive-0.1.7 \ + darling-0.13.4 \ + darling_core-0.13.4 \ + darling_macro-0.13.4 \ + derive-new-0.5.9 \ + dirs-4.0.0 \ + dirs-sys-0.3.7 \ + either-1.7.0 \ + enum-map-1.1.1 \ + enum-map-2.4.0 \ + enum-map-derive-0.6.0 \ + enum-map-derive-0.9.0 \ + enumset-1.0.11 \ + enumset_derive-0.6.0 \ + feature-probe-0.1.1 \ + fixedbitset-0.4.2 \ + fnv-1.0.7 \ + fxhash-0.2.1 \ + getrandom-0.2.7 \ + getset-0.1.2 \ + hashbrown-0.12.3 \ + heck-0.3.3 \ + hermit-abi-0.1.19 \ + hex-0.4.3 \ + ident_case-1.0.1 \ + indexmap-1.9.1 \ + itertools-0.10.3 \ + itertools-num-0.1.3 \ + itoa-0.4.8 \ + itoa-1.0.2 \ + lazy_static-1.4.0 \ + libc-0.2.126 \ + libm-0.2.2 \ + lock_api-0.4.7 \ + log-0.4.17 \ + matrixmultiply-0.3.2 \ + memchr-2.5.0 \ + memmap2-0.5.5 \ + mio-0.8.4 \ + multimap-0.8.3 \ + nalgebra-0.27.1 \ + nalgebra-macros-0.1.0 \ + ndarray-0.15.4 \ + newtype_derive-0.1.6 \ + num-0.4.0 \ + num-complex-0.4.2 \ + num-integer-0.1.45 \ + num-iter-0.1.43 \ + num-rational-0.4.1 \ + num-traits-0.2.15 \ + num_cpus-1.13.1 \ + num_threads-0.1.6 \ + once_cell-1.13.0 \ + ordered-float-1.1.1 \ + owning_ref-0.4.1 \ + parking_lot-0.12.1 \ + parking_lot_core-0.9.3 \ + paste-1.0.7 \ + petgraph-0.6.2 \ + ppv-lite86-0.2.16 \ + primal-check-0.3.1 \ + proc-macro-error-1.0.4 \ + proc-macro-error-attr-1.0.4 \ + proc-macro2-1.0.40 \ + quote-1.0.20 \ + rand-0.8.5 \ + rand_chacha-0.3.1 \ + rand_core-0.6.3 \ + rand_distr-0.4.3 \ + rawpointer-0.2.1 \ + realfft-3.0.0 \ + redox_syscall-0.2.13 \ + redox_users-0.4.3 \ + regex-1.6.0 \ + regex-automata-0.1.10 \ + regex-syntax-0.6.27 \ + rustc_version-0.1.7 \ + rustfft-6.0.1 \ + rustversion-1.0.8 \ + ryu-1.0.10 \ + scopeguard-1.1.0 \ + semver-0.1.20 \ + serde-1.0.140 \ + serde_derive-1.0.140 \ + serde_json-1.0.82 \ + signal-hook-0.3.14 \ + signal-hook-mio-0.2.3 \ + signal-hook-registry-1.4.0 \ + simba-0.5.1 \ + smallvec-1.9.0 \ + stable_deref_trait-1.2.0 \ + statrs-0.15.0 \ + strength_reduce-0.2.3 \ + strum-0.23.0 \ + strum_macros-0.23.1 \ + syn-1.0.98 \ + thiserror-1.0.31 \ + thiserror-impl-1.0.31 \ + time-0.3.11 \ + transpose-0.2.1 \ + triple_accel-0.4.0 \ + typenum-1.15.0 \ + unicode-ident-1.0.2 \ + unicode-segmentation-1.9.0 \ + unicode-width-0.1.9 \ + vec_map-0.8.2 \ + version_check-0.9.4 \ + wasi-0.11.0+wasi-snapshot-preview1 \ + winapi-0.3.9 \ + winapi-i686-pc-windows-gnu-0.4.0 \ + winapi-x86_64-pc-windows-gnu-0.4.0 \ + windows-sys-0.36.1 \ + windows_aarch64_msvc-0.36.1 \ + windows_i686_gnu-0.36.1 \ + windows_i686_msvc-0.36.1 \ + windows_x86_64_gnu-0.36.1 \ + windows_x86_64_msvc-0.36.1 \ + xi-unicode-0.3.0 + +PLIST_FILES= bin/${PORTNAME} \ + bin/git-biodiff + +post-install: + @${STRIP_CMD} \ + ${STAGEDIR}${PREFIX}/bin/${PORTNAME} \ + ${STAGEDIR}${PREFIX}/bin/git-biodiff + +.include diff --git a/textproc/biodiff/distinfo b/textproc/biodiff/distinfo new file mode 100644 index 000000000000..70aca2faad96 --- /dev/null +++ b/textproc/biodiff/distinfo @@ -0,0 +1,287 @@ +TIMESTAMP = 1672699613 +SHA256 (rust/crates/ahash-0.7.6.crate) = fcb51a0695d8f838b1ee009b3fbf66bda078cd64590202a864a8f3e8c4315c47 +SIZE (rust/crates/ahash-0.7.6.crate) = 38030 +SHA256 (rust/crates/aho-corasick-0.7.18.crate) = 1e37cfd5e7657ada45f742d6e99ca5788580b5c529dc78faf11ece6dc702656f +SIZE (rust/crates/aho-corasick-0.7.18.crate) = 112923 +SHA256 (rust/crates/anyhow-1.0.58.crate) = bb07d2053ccdbe10e2af2995a2f116c1330396493dc1269f6a91d0ae82e19704 +SIZE (rust/crates/anyhow-1.0.58.crate) = 43137 +SHA256 (rust/crates/approx-0.5.1.crate) = cab112f0a86d568ea0e627cc1d6be74a1e9cd55214684db5561995f6dad897c6 +SIZE (rust/crates/approx-0.5.1.crate) = 15100 +SHA256 (rust/crates/autocfg-1.1.0.crate) = d468802bab17cbc0cc575e9b053f41e72aa36bfa6b7f55e3529ffa43161b97fa +SIZE (rust/crates/autocfg-1.1.0.crate) = 13272 +SHA256 (rust/crates/bio-0.41.0.crate) = 4a69423e30444738eccc5e54eccee75779dd3f15ecc0469b95d8529d4b6b7586 +SIZE (rust/crates/bio-0.41.0.crate) = 190764 +SHA256 (rust/crates/bio-types-0.12.1.crate) = 13bc4296477f37f54e4fd21efaf48a7fa40fbb289bfbf338af5fbbe42797acb6 +SIZE (rust/crates/bio-types-0.12.1.crate) = 22058 +SHA256 (rust/crates/bit-set-0.5.2.crate) = 6e11e16035ea35e4e5997b393eacbf6f63983188f7a2ad25bfb13465f5ad59de +SIZE (rust/crates/bit-set-0.5.2.crate) = 14093 +SHA256 (rust/crates/bit-vec-0.6.3.crate) = 349f9b6a179ed607305526ca489b34ad0a41aed5f7980fa90eb03160b69598fb +SIZE (rust/crates/bit-vec-0.6.3.crate) = 19927 +SHA256 (rust/crates/bitflags-1.3.2.crate) = bef38d45163c2f1dde094a7dfd33ccf595c92905c8f8f4fdc18d06fb1037718a +SIZE (rust/crates/bitflags-1.3.2.crate) = 23021 +SHA256 (rust/crates/bstr-0.2.17.crate) = ba3569f383e8f1598449f1a423e72e99569137b47740b1da11ef19af3d5c3223 +SIZE (rust/crates/bstr-0.2.17.crate) = 330350 +SHA256 (rust/crates/bv-0.11.1.crate) = 8834bb1d8ee5dc048ee3124f2c7c1afcc6bc9aed03f11e9dfd8c69470a5db340 +SIZE (rust/crates/bv-0.11.1.crate) = 42061 +SHA256 (rust/crates/bytecount-0.6.3.crate) = 2c676a478f63e9fa2dd5368a42f28bba0d6c560b775f38583c8bbaa7fcd67c9c +SIZE (rust/crates/bytecount-0.6.3.crate) = 12416 +SHA256 (rust/crates/byteorder-1.4.3.crate) = 14c189c53d098945499cdfa7ecc63567cf3886b3332b312a5b4585d8d3a6a610 +SIZE (rust/crates/byteorder-1.4.3.crate) = 22512 +SHA256 (rust/crates/cfg-if-1.0.0.crate) = baf1de4339761588bc0619e3cbc0120ee582ebb74b53b4efbf79117bd2da40fd +SIZE (rust/crates/cfg-if-1.0.0.crate) = 7934 +SHA256 (rust/crates/crossbeam-channel-0.5.5.crate) = 4c02a4d71819009c192cf4872265391563fd6a84c81ff2c0f2a7026ca4c1d85c +SIZE (rust/crates/crossbeam-channel-0.5.5.crate) = 90326 +SHA256 (rust/crates/crossbeam-utils-0.8.10.crate) = 7d82ee10ce34d7bc12c2122495e7593a9c41347ecdd64185af4ecf72cb1a7f83 +SIZE (rust/crates/crossbeam-utils-0.8.10.crate) = 40672 +SHA256 (rust/crates/crossterm-0.24.0.crate) = ab9f7409c70a38a56216480fba371ee460207dd8926ccf5b4160591759559170 +SIZE (rust/crates/crossterm-0.24.0.crate) = 110615 +SHA256 (rust/crates/crossterm_winapi-0.9.0.crate) = 2ae1b35a484aa10e07fe0638d02301c5ad24de82d310ccbd2f3693da5f09bf1c +SIZE (rust/crates/crossterm_winapi-0.9.0.crate) = 15561 +SHA256 (rust/crates/csv-1.1.6.crate) = 22813a6dc45b335f9bade10bf7271dc477e81113e89eb251a0bc2a8a81c536e1 +SIZE (rust/crates/csv-1.1.6.crate) = 886999 +SHA256 (rust/crates/csv-core-0.1.10.crate) = 2b2466559f260f48ad25fe6317b3c8dac77b5bdb5763ac7d9d6103530663bc90 +SIZE (rust/crates/csv-core-0.1.10.crate) = 25668 +SHA256 (rust/crates/cursive-0.19.0.crate) = f3dc950f7cbc2aeb48ba253623fcd21357b15170a0e7c5f6433081d95808b7fd +SIZE (rust/crates/cursive-0.19.0.crate) = 67387 +SHA256 (rust/crates/cursive_buffered_backend-0.6.0.crate) = 68c7725a87b0a5240427917d645d279669fa8bb523cd920d2c442da7ef8b769d +SIZE (rust/crates/cursive_buffered_backend-0.6.0.crate) = 6386 +SHA256 (rust/crates/cursive_core-0.3.4.crate) = 4f8332f2d1dc815a1c72aa95cba6a557198b8e875371a8f1951037f510d7e257 +SIZE (rust/crates/cursive_core-0.3.4.crate) = 152221 +SHA256 (rust/crates/custom_derive-0.1.7.crate) = ef8ae57c4978a2acd8b869ce6b9ca1dfe817bff704c220209fdef2c0b75a01b9 +SIZE (rust/crates/custom_derive-0.1.7.crate) = 10700 +SHA256 (rust/crates/darling-0.13.4.crate) = a01d95850c592940db9b8194bc39f4bc0e89dee5c4265e4b1807c34a9aba453c +SIZE (rust/crates/darling-0.13.4.crate) = 20895 +SHA256 (rust/crates/darling_core-0.13.4.crate) = 859d65a907b6852c9361e3185c862aae7fafd2887876799fa55f5f99dc40d610 +SIZE (rust/crates/darling_core-0.13.4.crate) = 52937 +SHA256 (rust/crates/darling_macro-0.13.4.crate) = 9c972679f83bdf9c42bd905396b6c3588a843a17f0f16dfcfa3e2c5d57441835 +SIZE (rust/crates/darling_macro-0.13.4.crate) = 1910 +SHA256 (rust/crates/derive-new-0.5.9.crate) = 3418329ca0ad70234b9735dc4ceed10af4df60eff9c8e7b06cb5e520d92c3535 +SIZE (rust/crates/derive-new-0.5.9.crate) = 7733 +SHA256 (rust/crates/dirs-4.0.0.crate) = ca3aa72a6f96ea37bbc5aa912f6788242832f75369bdfdadcb0e38423f100059 +SIZE (rust/crates/dirs-4.0.0.crate) = 12503 +SHA256 (rust/crates/dirs-sys-0.3.7.crate) = 1b1d1d91c932ef41c0f2663aa8b0ca0342d444d842c06914aa0a7e352d0bada6 +SIZE (rust/crates/dirs-sys-0.3.7.crate) = 10597 +SHA256 (rust/crates/either-1.7.0.crate) = 3f107b87b6afc2a64fd13cac55fe06d6c8859f12d4b14cbcdd2c67d0976781be +SIZE (rust/crates/either-1.7.0.crate) = 15492 +SHA256 (rust/crates/enum-map-1.1.1.crate) = e893a7ba6116821058dec84a6fb14fb2a97cd8ce5fd0f85d5a4e760ecd7329d9 +SIZE (rust/crates/enum-map-1.1.1.crate) = 10082 +SHA256 (rust/crates/enum-map-2.4.0.crate) = 6ddfe61e8040145222887d0d32a939c70c8cae681490d72fb868305e9b40ced8 +SIZE (rust/crates/enum-map-2.4.0.crate) = 12220 +SHA256 (rust/crates/enum-map-derive-0.6.0.crate) = 84278eae0af6e34ff6c1db44c11634a694aafac559ff3080e4db4e4ac35907aa +SIZE (rust/crates/enum-map-derive-0.6.0.crate) = 2012 +SHA256 (rust/crates/enum-map-derive-0.9.0.crate) = 00d1c54e25a57236a790ecf051c2befbb57740c9b86c4273eac378ba84d620d6 +SIZE (rust/crates/enum-map-derive-0.9.0.crate) = 3809 +SHA256 (rust/crates/enumset-1.0.11.crate) = 4799cdb24d48f1f8a7a98d06b7fde65a85a2d1e42b25a889f5406aa1fbefe074 +SIZE (rust/crates/enumset-1.0.11.crate) = 20347 +SHA256 (rust/crates/enumset_derive-0.6.0.crate) = ea83a3fbdc1d999ccfbcbee717eab36f8edf2d71693a23ce0d7cca19e085304c +SIZE (rust/crates/enumset_derive-0.6.0.crate) = 10706 +SHA256 (rust/crates/feature-probe-0.1.1.crate) = 835a3dc7d1ec9e75e2b5fb4ba75396837112d2060b03f7d43bc1897c7f7211da +SIZE (rust/crates/feature-probe-0.1.1.crate) = 7622 +SHA256 (rust/crates/fixedbitset-0.4.2.crate) = 0ce7134b9999ecaf8bcd65542e436736ef32ddca1b3e06094cb6ec5755203b80 +SIZE (rust/crates/fixedbitset-0.4.2.crate) = 15954 +SHA256 (rust/crates/fnv-1.0.7.crate) = 3f9eec918d3f24069decb9af1554cad7c880e2da24a9afd88aca000531ab82c1 +SIZE (rust/crates/fnv-1.0.7.crate) = 11266 +SHA256 (rust/crates/fxhash-0.2.1.crate) = c31b6d751ae2c7f11320402d34e41349dd1016f8d5d45e48c4312bc8625af50c +SIZE (rust/crates/fxhash-0.2.1.crate) = 4102 +SHA256 (rust/crates/getrandom-0.2.7.crate) = 4eb1a864a501629691edf6c15a593b7a51eebaa1e8468e9ddc623de7c9b58ec6 +SIZE (rust/crates/getrandom-0.2.7.crate) = 28854 +SHA256 (rust/crates/getset-0.1.2.crate) = e45727250e75cc04ff2846a66397da8ef2b3db8e40e0cef4df67950a07621eb9 +SIZE (rust/crates/getset-0.1.2.crate) = 8831 +SHA256 (rust/crates/hashbrown-0.12.3.crate) = 8a9ee70c43aaf417c914396645a0fa852624801b24ebb7ae78fe8272889ac888 +SIZE (rust/crates/hashbrown-0.12.3.crate) = 102968 +SHA256 (rust/crates/heck-0.3.3.crate) = 6d621efb26863f0e9924c6ac577e8275e5e6b77455db64ffa6c65c904e9e132c +SIZE (rust/crates/heck-0.3.3.crate) = 10260 +SHA256 (rust/crates/hermit-abi-0.1.19.crate) = 62b467343b94ba476dcb2500d242dadbb39557df889310ac77c5d99100aaac33 +SIZE (rust/crates/hermit-abi-0.1.19.crate) = 9979 +SHA256 (rust/crates/hex-0.4.3.crate) = 7f24254aa9a54b5c858eaee2f5bccdb46aaf0e486a595ed5fd8f86ba55232a70 +SIZE (rust/crates/hex-0.4.3.crate) = 13299 +SHA256 (rust/crates/ident_case-1.0.1.crate) = b9e0384b61958566e926dc50660321d12159025e767c18e043daf26b70104c39 +SIZE (rust/crates/ident_case-1.0.1.crate) = 3492 +SHA256 (rust/crates/indexmap-1.9.1.crate) = 10a35a97730320ffe8e2d410b5d3b69279b98d2c14bdb8b70ea89ecf7888d41e +SIZE (rust/crates/indexmap-1.9.1.crate) = 54114 +SHA256 (rust/crates/itertools-0.10.3.crate) = a9a9d19fa1e79b6215ff29b9d6880b706147f16e9b1dbb1e4e5947b5b02bc5e3 +SIZE (rust/crates/itertools-0.10.3.crate) = 118661 +SHA256 (rust/crates/itertools-num-0.1.3.crate) = a872a22f9e6f7521ca557660adb96dd830e54f0f490fa115bb55dd69d38b27e7 +SIZE (rust/crates/itertools-num-0.1.3.crate) = 7790 +SHA256 (rust/crates/itoa-0.4.8.crate) = b71991ff56294aa922b450139ee08b3bfc70982c6b2c7562771375cf73542dd4 +SIZE (rust/crates/itoa-0.4.8.crate) = 11926 +SHA256 (rust/crates/itoa-1.0.2.crate) = 112c678d4050afce233f4f2852bb2eb519230b3cf12f33585275537d7e41578d +SIZE (rust/crates/itoa-1.0.2.crate) = 11112 +SHA256 (rust/crates/lazy_static-1.4.0.crate) = e2abad23fbc42b3700f2f279844dc832adb2b2eb069b2df918f455c4e18cc646 +SIZE (rust/crates/lazy_static-1.4.0.crate) = 10443 +SHA256 (rust/crates/libc-0.2.126.crate) = 349d5a591cd28b49e1d1037471617a32ddcda5731b99419008085f72d5a53836 +SIZE (rust/crates/libc-0.2.126.crate) = 590481 +SHA256 (rust/crates/libm-0.2.2.crate) = 33a33a362ce288760ec6a508b94caaec573ae7d3bbbd91b87aa0bad4456839db +SIZE (rust/crates/libm-0.2.2.crate) = 113226 +SHA256 (rust/crates/lock_api-0.4.7.crate) = 327fa5b6a6940e4699ec49a9beae1ea4845c6bab9314e4f84ac68742139d8c53 +SIZE (rust/crates/lock_api-0.4.7.crate) = 25371 +SHA256 (rust/crates/log-0.4.17.crate) = abb12e687cfb44aa40f41fc3978ef76448f9b6038cad6aef4259d3c095a2382e +SIZE (rust/crates/log-0.4.17.crate) = 38028 +SHA256 (rust/crates/matrixmultiply-0.3.2.crate) = add85d4dd35074e6fedc608f8c8f513a3548619a9024b751949ef0e8e45a4d84 +SIZE (rust/crates/matrixmultiply-0.3.2.crate) = 49247 +SHA256 (rust/crates/memchr-2.5.0.crate) = 2dffe52ecf27772e601905b7522cb4ef790d2cc203488bbd0e2fe85fcb74566d +SIZE (rust/crates/memchr-2.5.0.crate) = 65812 +SHA256 (rust/crates/memmap2-0.5.5.crate) = 3a79b39c93a7a5a27eeaf9a23b5ff43f1b9e0ad6b1cdd441140ae53c35613fc7 +SIZE (rust/crates/memmap2-0.5.5.crate) = 25900 +SHA256 (rust/crates/mio-0.8.4.crate) = 57ee1c23c7c63b0c9250c339ffdc69255f110b298b901b9f6c82547b7b87caaf +SIZE (rust/crates/mio-0.8.4.crate) = 93013 +SHA256 (rust/crates/multimap-0.8.3.crate) = e5ce46fe64a9d73be07dcbe690a38ce1b293be448fd8ce1e6c1b8062c9f72c6a +SIZE (rust/crates/multimap-0.8.3.crate) = 13518 +SHA256 (rust/crates/nalgebra-0.27.1.crate) = 462fffe4002f4f2e1f6a9dcf12cc1a6fc0e15989014efc02a941d3e0f5dc2120 +SIZE (rust/crates/nalgebra-0.27.1.crate) = 330962 +SHA256 (rust/crates/nalgebra-macros-0.1.0.crate) = 01fcc0b8149b4632adc89ac3b7b31a12fb6099a0317a4eb2ebff574ef7de7218 +SIZE (rust/crates/nalgebra-macros-0.1.0.crate) = 5758 +SHA256 (rust/crates/ndarray-0.15.4.crate) = dec23e6762830658d2b3d385a75aa212af2f67a4586d4442907144f3bb6a1ca8 +SIZE (rust/crates/ndarray-0.15.4.crate) = 271373 +SHA256 (rust/crates/newtype_derive-0.1.6.crate) = ac8cd24d9f185bb7223958d8c1ff7a961b74b1953fd05dba7cc568a63b3861ec +SIZE (rust/crates/newtype_derive-0.1.6.crate) = 7357 +SHA256 (rust/crates/num-0.4.0.crate) = 43db66d1170d347f9a065114077f7dccb00c1b9478c89384490a3425279a4606 +SIZE (rust/crates/num-0.4.0.crate) = 9490 +SHA256 (rust/crates/num-complex-0.4.2.crate) = 7ae39348c8bc5fbd7f40c727a9925f03517afd2ab27d46702108b6a7e5414c19 +SIZE (rust/crates/num-complex-0.4.2.crate) = 29341 +SHA256 (rust/crates/num-integer-0.1.45.crate) = 225d3389fb3509a24c93f5c29eb6bde2586b98d9f016636dff58d7c6f7569cd9 +SIZE (rust/crates/num-integer-0.1.45.crate) = 22529 +SHA256 (rust/crates/num-iter-0.1.43.crate) = 7d03e6c028c5dc5cac6e2dec0efda81fc887605bb3d884578bb6d6bf7514e252 +SIZE (rust/crates/num-iter-0.1.43.crate) = 10655 +SHA256 (rust/crates/num-rational-0.4.1.crate) = 0638a1c9d0a3c0914158145bc76cff373a75a627e6ecbfb71cbe6f453a5a19b0 +SIZE (rust/crates/num-rational-0.4.1.crate) = 27889 +SHA256 (rust/crates/num-traits-0.2.15.crate) = 578ede34cf02f8924ab9447f50c28075b4d3e5b269972345e7e0372b38c6cdcd +SIZE (rust/crates/num-traits-0.2.15.crate) = 49262 +SHA256 (rust/crates/num_cpus-1.13.1.crate) = 19e64526ebdee182341572e50e9ad03965aa510cd94427a4549448f285e957a1 +SIZE (rust/crates/num_cpus-1.13.1.crate) = 14752 +SHA256 (rust/crates/num_threads-0.1.6.crate) = 2819ce041d2ee131036f4fc9d6ae7ae125a3a40e97ba64d04fe799ad9dabbb44 +SIZE (rust/crates/num_threads-0.1.6.crate) = 7334 +SHA256 (rust/crates/once_cell-1.13.0.crate) = 18a6dbe30758c9f83eb00cbea4ac95966305f5a7772f3f42ebfc7fc7eddbd8e1 +SIZE (rust/crates/once_cell-1.13.0.crate) = 31726 +SHA256 (rust/crates/ordered-float-1.1.1.crate) = 3305af35278dd29f46fcdd139e0b1fbfae2153f0e5928b39b035542dd31e37b7 +SIZE (rust/crates/ordered-float-1.1.1.crate) = 9983 +SHA256 (rust/crates/owning_ref-0.4.1.crate) = 6ff55baddef9e4ad00f88b6c743a2a8062d4c6ade126c2a528644b8e444d52ce +SIZE (rust/crates/owning_ref-0.4.1.crate) = 12658 +SHA256 (rust/crates/parking_lot-0.12.1.crate) = 3742b2c103b9f06bc9fff0a37ff4912935851bee6d36f3c02bcc755bcfec228f +SIZE (rust/crates/parking_lot-0.12.1.crate) = 40967 +SHA256 (rust/crates/parking_lot_core-0.9.3.crate) = 09a279cbf25cb0757810394fbc1e359949b59e348145c643a939a525692e6929 +SIZE (rust/crates/parking_lot_core-0.9.3.crate) = 32256 +SHA256 (rust/crates/paste-1.0.7.crate) = 0c520e05135d6e763148b6426a837e239041653ba7becd2e538c076c738025fc +SIZE (rust/crates/paste-1.0.7.crate) = 18285 +SHA256 (rust/crates/petgraph-0.6.2.crate) = e6d5014253a1331579ce62aa67443b4a658c5e7dd03d4bc6d302b94474888143 +SIZE (rust/crates/petgraph-0.6.2.crate) = 182513 +SHA256 (rust/crates/ppv-lite86-0.2.16.crate) = eb9f9e6e233e5c4a35559a617bf40a4ec447db2e84c20b55a6f83167b7e57872 +SIZE (rust/crates/ppv-lite86-0.2.16.crate) = 22245 +SHA256 (rust/crates/primal-check-0.3.1.crate) = 01419cee72c1a1ca944554e23d83e483e1bccf378753344e881de28b5487511d +SIZE (rust/crates/primal-check-0.3.1.crate) = 4602 +SHA256 (rust/crates/proc-macro-error-1.0.4.crate) = da25490ff9892aab3fcf7c36f08cfb902dd3e71ca0f9f9517bea02a73a5ce38c +SIZE (rust/crates/proc-macro-error-1.0.4.crate) = 25293 +SHA256 (rust/crates/proc-macro-error-attr-1.0.4.crate) = a1be40180e52ecc98ad80b184934baf3d0d29f979574e439af5a55274b35f869 +SIZE (rust/crates/proc-macro-error-attr-1.0.4.crate) = 7971 +SHA256 (rust/crates/proc-macro2-1.0.40.crate) = dd96a1e8ed2596c337f8eae5f24924ec83f5ad5ab21ea8e455d3566c69fbcaf7 +SIZE (rust/crates/proc-macro2-1.0.40.crate) = 40559 +SHA256 (rust/crates/quote-1.0.20.crate) = 3bcdf212e9776fbcb2d23ab029360416bb1706b1aea2d1a5ba002727cbcab804 +SIZE (rust/crates/quote-1.0.20.crate) = 28160 +SHA256 (rust/crates/rand-0.8.5.crate) = 34af8d1a0e25924bc5b7c43c079c942339d8f0a8b57c39049bef581b46327404 +SIZE (rust/crates/rand-0.8.5.crate) = 87113 +SHA256 (rust/crates/rand_chacha-0.3.1.crate) = e6c10a63a0fa32252be49d21e7709d4d4baf8d231c2dbce1eaa8141b9b127d88 +SIZE (rust/crates/rand_chacha-0.3.1.crate) = 15251 +SHA256 (rust/crates/rand_core-0.6.3.crate) = d34f1408f55294453790c48b2f1ebbb1c5b4b7563eb1f418bcfcfdbb06ebb4e7 +SIZE (rust/crates/rand_core-0.6.3.crate) = 21938 +SHA256 (rust/crates/rand_distr-0.4.3.crate) = 32cb0b9bc82b0a0876c2dd994a7e7a2683d3e7390ca40e6886785ef0c7e3ee31 +SIZE (rust/crates/rand_distr-0.4.3.crate) = 58255 +SHA256 (rust/crates/rawpointer-0.2.1.crate) = 60a357793950651c4ed0f3f52338f53b2f809f32d83a07f72909fa13e4c6c1e3 +SIZE (rust/crates/rawpointer-0.2.1.crate) = 7490 +SHA256 (rust/crates/realfft-3.0.0.crate) = a83b876fe55da7e1bf5deeacb93d6411edf81eba0e1a497e79c067734729053a +SIZE (rust/crates/realfft-3.0.0.crate) = 15640 +SHA256 (rust/crates/redox_syscall-0.2.13.crate) = 62f25bc4c7e55e0b0b7a1d43fb893f4fa1361d0abe38b9ce4f323c2adfe6ef42 +SIZE (rust/crates/redox_syscall-0.2.13.crate) = 23759 +SHA256 (rust/crates/redox_users-0.4.3.crate) = b033d837a7cf162d7993aded9304e30a83213c648b6e389db233191f891e5c2b +SIZE (rust/crates/redox_users-0.4.3.crate) = 15353 +SHA256 (rust/crates/regex-1.6.0.crate) = 4c4eb3267174b8c6c2f654116623910a0fef09c4753f8dd83db29c48a0df988b +SIZE (rust/crates/regex-1.6.0.crate) = 239329 +SHA256 (rust/crates/regex-automata-0.1.10.crate) = 6c230d73fb8d8c1b9c0b3135c5142a8acee3a0558fb8db5cf1cb65f8d7862132 +SIZE (rust/crates/regex-automata-0.1.10.crate) = 114533 +SHA256 (rust/crates/regex-syntax-0.6.27.crate) = a3f87b73ce11b1619a3c6332f45341e0047173771e8b8b73f87bfeefb7b56244 +SIZE (rust/crates/regex-syntax-0.6.27.crate) = 297300 +SHA256 (rust/crates/rustc_version-0.1.7.crate) = c5f5376ea5e30ce23c03eb77cbe4962b988deead10910c372b226388b594c084 +SIZE (rust/crates/rustc_version-0.1.7.crate) = 8816 +SHA256 (rust/crates/rustfft-6.0.1.crate) = b1d089e5c57521629a59f5f39bca7434849ff89bd6873b521afe389c1c602543 +SIZE (rust/crates/rustfft-6.0.1.crate) = 220147 +SHA256 (rust/crates/rustversion-1.0.8.crate) = 24c8ad4f0c00e1eb5bc7614d236a7f1300e3dbd76b68cac8e06fb00b015ad8d8 +SIZE (rust/crates/rustversion-1.0.8.crate) = 17351 +SHA256 (rust/crates/ryu-1.0.10.crate) = f3f6f92acf49d1b98f7a81226834412ada05458b7364277387724a237f062695 +SIZE (rust/crates/ryu-1.0.10.crate) = 48485 +SHA256 (rust/crates/scopeguard-1.1.0.crate) = d29ab0c6d3fc0ee92fe66e2d99f700eab17a8d57d1c1d3b748380fb20baa78cd +SIZE (rust/crates/scopeguard-1.1.0.crate) = 11470 +SHA256 (rust/crates/semver-0.1.20.crate) = d4f410fedcf71af0345d7607d246e7ad15faaadd49d240ee3b24e5dc21a820ac +SIZE (rust/crates/semver-0.1.20.crate) = 15876 +SHA256 (rust/crates/serde-1.0.140.crate) = fc855a42c7967b7c369eb5860f7164ef1f6f81c20c7cc1141f2a604e18723b03 +SIZE (rust/crates/serde-1.0.140.crate) = 76408 +SHA256 (rust/crates/serde_derive-1.0.140.crate) = 6f2122636b9fe3b81f1cb25099fcf2d3f542cdb1d45940d56c713158884a05da +SIZE (rust/crates/serde_derive-1.0.140.crate) = 54851 +SHA256 (rust/crates/serde_json-1.0.82.crate) = 82c2c1fdcd807d1098552c5b9a36e425e42e9fbd7c6a37a8425f390f781f7fa7 +SIZE (rust/crates/serde_json-1.0.82.crate) = 144514 +SHA256 (rust/crates/signal-hook-0.3.14.crate) = a253b5e89e2698464fc26b545c9edceb338e18a89effeeecfea192c3025be29d +SIZE (rust/crates/signal-hook-0.3.14.crate) = 49446 +SHA256 (rust/crates/signal-hook-mio-0.2.3.crate) = 29ad2e15f37ec9a6cc544097b78a1ec90001e9f71b81338ca39f430adaca99af +SIZE (rust/crates/signal-hook-mio-0.2.3.crate) = 9064 +SHA256 (rust/crates/signal-hook-registry-1.4.0.crate) = e51e73328dc4ac0c7ccbda3a494dfa03df1de2f46018127f60c693f2648455b0 +SIZE (rust/crates/signal-hook-registry-1.4.0.crate) = 17912 +SHA256 (rust/crates/simba-0.5.1.crate) = 8e82063457853d00243beda9952e910b82593e4b07ae9f721b9278a99a0d3d5c +SIZE (rust/crates/simba-0.5.1.crate) = 48512 +SHA256 (rust/crates/smallvec-1.9.0.crate) = 2fd0db749597d91ff862fd1d55ea87f7855a744a8425a64695b6fca237d1dad1 +SIZE (rust/crates/smallvec-1.9.0.crate) = 28396 +SHA256 (rust/crates/stable_deref_trait-1.2.0.crate) = a8f112729512f8e442d81f95a8a7ddf2b7c6b8a1a6f509a95864142b30cab2d3 +SIZE (rust/crates/stable_deref_trait-1.2.0.crate) = 8054 +SHA256 (rust/crates/statrs-0.15.0.crate) = 05bdbb8e4e78216a85785a85d3ec3183144f98d0097b9281802c019bb07a6f05 +SIZE (rust/crates/statrs-0.15.0.crate) = 131157 +SHA256 (rust/crates/strength_reduce-0.2.3.crate) = a3ff2f71c82567c565ba4b3009a9350a96a7269eaa4001ebedae926230bc2254 +SIZE (rust/crates/strength_reduce-0.2.3.crate) = 13283 +SHA256 (rust/crates/strum-0.23.0.crate) = cae14b91c7d11c9a851d3fbc80a963198998c2a64eec840477fa92d8ce9b70bb +SIZE (rust/crates/strum-0.23.0.crate) = 5429 +SHA256 (rust/crates/strum_macros-0.23.1.crate) = 5bb0dc7ee9c15cea6199cde9a127fa16a4c5819af85395457ad72d68edc85a38 +SIZE (rust/crates/strum_macros-0.23.1.crate) = 18203 +SHA256 (rust/crates/syn-1.0.98.crate) = c50aef8a904de4c23c788f104b7dddc7d6f79c647c7c8ce4cc8f73eb0ca773dd +SIZE (rust/crates/syn-1.0.98.crate) = 235451 +SHA256 (rust/crates/thiserror-1.0.31.crate) = bd829fe32373d27f76265620b5309d0340cb8550f523c1dda251d6298069069a +SIZE (rust/crates/thiserror-1.0.31.crate) = 18013 +SHA256 (rust/crates/thiserror-impl-1.0.31.crate) = 0396bc89e626244658bef819e22d0cc459e795a5ebe878e6ec336d1674a8d79a +SIZE (rust/crates/thiserror-impl-1.0.31.crate) = 15283 +SHA256 (rust/crates/time-0.3.11.crate) = 72c91f41dcb2f096c05f0873d667dceec1087ce5bcf984ec8ffb19acddbb3217 +SIZE (rust/crates/time-0.3.11.crate) = 91807 +SHA256 (rust/crates/transpose-0.2.1.crate) = 95f9c900aa98b6ea43aee227fd680550cdec726526aab8ac801549eadb25e39f +SIZE (rust/crates/transpose-0.2.1.crate) = 6499 +SHA256 (rust/crates/triple_accel-0.4.0.crate) = 22048bc95dfb2ffd05b1ff9a756290a009224b60b2f0e7525faeee7603851e63 +SIZE (rust/crates/triple_accel-0.4.0.crate) = 37943 +SHA256 (rust/crates/typenum-1.15.0.crate) = dcf81ac59edc17cc8697ff311e8f5ef2d99fcbd9817b34cec66f90b6c3dfd987 +SIZE (rust/crates/typenum-1.15.0.crate) = 40741 +SHA256 (rust/crates/unicode-ident-1.0.2.crate) = 15c61ba63f9235225a22310255a29b806b907c9b8c964bcbd0a2c70f3f2deea7 +SIZE (rust/crates/unicode-ident-1.0.2.crate) = 34951 +SHA256 (rust/crates/unicode-segmentation-1.9.0.crate) = 7e8820f5d777f6224dc4be3632222971ac30164d4a258d595640799554ebfd99 +SIZE (rust/crates/unicode-segmentation-1.9.0.crate) = 93241 +SHA256 (rust/crates/unicode-width-0.1.9.crate) = 3ed742d4ea2bd1176e236172c8429aaf54486e7ac098db29ffe6529e0ce50973 +SIZE (rust/crates/unicode-width-0.1.9.crate) = 16745 +SHA256 (rust/crates/vec_map-0.8.2.crate) = f1bddf1187be692e79c5ffeab891132dfb0f236ed36a43c7ed39f1165ee20191 +SIZE (rust/crates/vec_map-0.8.2.crate) = 14466 +SHA256 (rust/crates/version_check-0.9.4.crate) = 49874b5167b65d7193b8aba1567f5c7d93d001cafc34600cee003eda787e483f +SIZE (rust/crates/version_check-0.9.4.crate) = 14895 +SHA256 (rust/crates/wasi-0.11.0+wasi-snapshot-preview1.crate) = 9c8d87e72b64a3b4db28d11ce29237c246188f4f51057d65a7eab63b7987e423 +SIZE (rust/crates/wasi-0.11.0+wasi-snapshot-preview1.crate) = 28131 +SHA256 (rust/crates/winapi-0.3.9.crate) = 5c839a674fcd7a98952e593242ea400abe93992746761e38641405d28b00f419 +SIZE (rust/crates/winapi-0.3.9.crate) = 1200382 +SHA256 (rust/crates/winapi-i686-pc-windows-gnu-0.4.0.crate) = ac3b87c63620426dd9b991e5ce0329eff545bccbbb34f3be09ff6fb6ab51b7b6 +SIZE (rust/crates/winapi-i686-pc-windows-gnu-0.4.0.crate) = 2918815 +SHA256 (rust/crates/winapi-x86_64-pc-windows-gnu-0.4.0.crate) = 712e227841d057c1ee1cd2fb22fa7e5a5461ae8e48fa2ca79ec42cfc1931183f +SIZE (rust/crates/winapi-x86_64-pc-windows-gnu-0.4.0.crate) = 2947998 +SHA256 (rust/crates/windows-sys-0.36.1.crate) = ea04155a16a59f9eab786fe12a4a450e75cdb175f9e0d80da1e17db09f55b8d2 +SIZE (rust/crates/windows-sys-0.36.1.crate) = 3347053 +SHA256 (rust/crates/windows_aarch64_msvc-0.36.1.crate) = 9bb8c3fd39ade2d67e9874ac4f3db21f0d710bee00fe7cab16949ec184eeaa47 +SIZE (rust/crates/windows_aarch64_msvc-0.36.1.crate) = 661960 +SHA256 (rust/crates/windows_i686_gnu-0.36.1.crate) = 180e6ccf01daf4c426b846dfc66db1fc518f074baa793aa7d9b9aaeffad6a3b6 +SIZE (rust/crates/windows_i686_gnu-0.36.1.crate) = 818115 +SHA256 (rust/crates/windows_i686_msvc-0.36.1.crate) = e2e7917148b2812d1eeafaeb22a97e4813dfa60a3f8f78ebe204bcc88f12f024 +SIZE (rust/crates/windows_i686_msvc-0.36.1.crate) = 724575 +SHA256 (rust/crates/windows_x86_64_gnu-0.36.1.crate) = 4dcd171b8776c41b97521e5da127a2d86ad280114807d0b2ab1e462bc764d9e1 +SIZE (rust/crates/windows_x86_64_gnu-0.36.1.crate) = 790934 +SHA256 (rust/crates/windows_x86_64_msvc-0.36.1.crate) = c811ca4a8c853ef420abd8592ba53ddbbac90410fab6903b3e79972a631f7680 +SIZE (rust/crates/windows_x86_64_msvc-0.36.1.crate) = 661999 +SHA256 (rust/crates/xi-unicode-0.3.0.crate) = a67300977d3dc3f8034dae89778f502b6ba20b269527b3223ba59c0cf393bb8a +SIZE (rust/crates/xi-unicode-0.3.0.crate) = 87001 +SHA256 (8051Enthusiast-biodiff-v1.0.3_GH0.tar.gz) = 1e1aeccce2f6d3dfc1aaf15dde406e18f94b18b526e4e07b6b84a310c27d10fb +SIZE (8051Enthusiast-biodiff-v1.0.3_GH0.tar.gz) = 67949 diff --git a/textproc/biodiff/pkg-descr b/textproc/biodiff/pkg-descr new file mode 100644 index 000000000000..178ae8a42154 --- /dev/null +++ b/textproc/biodiff/pkg-descr @@ -0,0 +1,10 @@ +biodiff is a tool for binary diffing. + +The tool is able to show two binary files side by side so that similar places +will be at the same position on both sides and bytes missing from one side are +padded. + +It uses bio-informatics algorithms from the rust-bio library, typically used +for DNA sequence alignment, for that. +The dialog boxes for configuration are done using the github.com/gyscos/cursive +library.