git: ada9b15851e5 - main - biology/atac-seq: Drop biology/igv dep
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Date: Sun, 19 Feb 2023 18:11:49 UTC
The branch main has been updated by jwb:
URL: https://cgit.FreeBSD.org/ports/commit/?id=ada9b15851e566b9c67ef8374eba913aa3561292
commit ada9b15851e566b9c67ef8374eba913aa3561292
Author: Jason W. Bacon <jwb@FreeBSD.org>
AuthorDate: 2023-02-19 18:11:12 +0000
Commit: Jason W. Bacon <jwb@FreeBSD.org>
CommitDate: 2023-02-19 18:11:12 +0000
biology/atac-seq: Drop biology/igv dep
Non-essential and currently broken
---
biology/atac-seq/Makefile | 3 +--
1 file changed, 1 insertion(+), 2 deletions(-)
diff --git a/biology/atac-seq/Makefile b/biology/atac-seq/Makefile
index a0da032ee1b0..46a1adb3bcda 100644
--- a/biology/atac-seq/Makefile
+++ b/biology/atac-seq/Makefile
@@ -1,5 +1,5 @@
PORTNAME= atac-seq
-DISTVERSION= 0.1.1
+DISTVERSION= 0.1.2
CATEGORIES= biology python
MASTER_SITES= # empty
@@ -17,7 +17,6 @@ RUN_DEPENDS= sra-tools>0:biology/sra-tools \
bwa>0:biology/bwa \
bowtie2>0:biology/bowtie2 \
samtools>0:biology/samtools \
- igv>0:biology/igv \
${PYTHON_PKGNAMEPREFIX}macs2>0:biology/py-macs2@${PY_FLAVOR} \
fasda>0:biology/fasda \
peak-classifier>0:biology/peak-classifier \