git: 32fed5246803 - main - science/py-MDAnalysis: Update 2.2.0 -> 2.3.0

The branch main has been updated by yuri:

URL: https://cgit.FreeBSD.org/ports/commit/?id=32fed5246803bd965285fd2750522ebcdd33c2cc

commit 32fed5246803bd965285fd2750522ebcdd33c2cc
Author:     Yuri Victorovich <yuri@FreeBSD.org>
AuthorDate: 2022-09-02 06:14:54 +0000
Commit:     Yuri Victorovich <yuri@FreeBSD.org>
CommitDate: 2022-09-02 06:37:41 +0000

    science/py-MDAnalysis: Update 2.2.0 -> 2.3.0
    
    Reported by:    portscout
---
 science/py-MDAnalysis/Makefile | 12 ++++--------
 science/py-MDAnalysis/distinfo |  6 +++---
 2 files changed, 7 insertions(+), 11 deletions(-)

diff --git a/science/py-MDAnalysis/Makefile b/science/py-MDAnalysis/Makefile
index 8f3478c38c4b..37f782bfe445 100644
--- a/science/py-MDAnalysis/Makefile
+++ b/science/py-MDAnalysis/Makefile
@@ -1,5 +1,5 @@
 PORTNAME=	MDAnalysis
-DISTVERSION=	2.2.0
+DISTVERSION=	2.3.0
 CATEGORIES=	science python
 MASTER_SITES=	CHEESESHOP
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
@@ -16,24 +16,20 @@ RUN_DEPENDS=	${PYNUMPY} \
 		clustalw2:biology/clustalw \
 		rdkit>0:science/rdkit \
 		${PYTHON_PKGNAMEPREFIX}biopython>=1.71:biology/py-biopython@${PY_FLAVOR} \
-		${PYTHON_PKGNAMEPREFIX}duecredit>0:textproc/py-duecredit@${PY_FLAVOR} \
 		${PYTHON_PKGNAMEPREFIX}GridDataFormats>=0.4.0:math/py-GridDataFormats@${PY_FLAVOR} \
+		${PYTHON_PKGNAMEPREFIX}fasteners>0:devel/py-fasteners@${PY_FLAVOR} \
 		${PYTHON_PKGNAMEPREFIX}gsd>=1.9.3:science/py-gsd@${PY_FLAVOR} \
-		${PYTHON_PKGNAMEPREFIX}h5py>0:science/py-h5py@${PY_FLAVOR} \
 		${PYTHON_PKGNAMEPREFIX}joblib>0:devel/py-joblib@${PY_FLAVOR} \
 		${PYTHON_PKGNAMEPREFIX}matplotlib>=1.5.1:math/py-matplotlib@${PY_FLAVOR} \
 		${PYTHON_PKGNAMEPREFIX}mmtf-python>=1.0.0:science/py-mmtf-python@${PY_FLAVOR} \
-		${PYTHON_PKGNAMEPREFIX}mock>0:devel/py-mock@${PY_FLAVOR} \
-		${PYTHON_PKGNAMEPREFIX}netCDF4>0:science/py-netCDF4@${PY_FLAVOR} \
-		${PYTHON_PKGNAMEPREFIX}networkx>0:math/py-networkx@${PY_FLAVOR} \
-		${PYTHON_PKGNAMEPREFIX}scikit-learn>0:science/py-scikit-learn@${PY_FLAVOR} \
+		${PYTHON_PKGNAMEPREFIX}networkx>=2.0:math/py-networkx@${PY_FLAVOR} \
 		${PYTHON_PKGNAMEPREFIX}scipy>=1.5.0:science/py-scipy@${PY_FLAVOR} \
 		${PYTHON_PKGNAMEPREFIX}seaborn>0:math/py-seaborn@${PY_FLAVOR} \
 		${PYTHON_PKGNAMEPREFIX}six>=1.4.0:devel/py-six@${PY_FLAVOR} \
 		${PYTHON_PKGNAMEPREFIX}tqdm>=4.43.0:misc/py-tqdm@${PY_FLAVOR}
 
 USES=		compiler:c++11-lang python:3.7+
-USE_PYTHON=	cython distutils autoplist
+USE_PYTHON=	distutils cython autoplist
 
 .if !defined(WITH_DEBUG)
 LDFLAGS+=	-s
diff --git a/science/py-MDAnalysis/distinfo b/science/py-MDAnalysis/distinfo
index 1c316cf373ea..eefa396a1fd7 100644
--- a/science/py-MDAnalysis/distinfo
+++ b/science/py-MDAnalysis/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1655365188
-SHA256 (MDAnalysis-2.2.0.tar.gz) = bf9c9b7a03404e65aad66215d4c2ff8834ab747551eeaee059ff3e599a99d322
-SIZE (MDAnalysis-2.2.0.tar.gz) = 3640167
+TIMESTAMP = 1662095086
+SHA256 (MDAnalysis-2.3.0.tar.gz) = 29579433c4ea87048278dc1d4019b52e6a19504162659447be7c79fbdbf508ff
+SIZE (MDAnalysis-2.3.0.tar.gz) = 3701615