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Thu, 17 Nov 2022 04:08:49 GMT (envelope-from git) Date: Thu, 17 Nov 2022 04:08:49 GMT Message-Id: <202211170408.2AH48nOW062534@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: Yuri Victorovich Subject: git: 84c8a1dd3e2d - main - graphics/simpleitk: New port: Simplification layer built on top of the Insight Toolkit (ITK) List-Id: Commits to the main branch of the FreeBSD ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-main List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-dev-commits-ports-main@freebsd.org X-BeenThere: dev-commits-ports-main@freebsd.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: yuri X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: 84c8a1dd3e2dd1b11fa800a940c1b53b782f009c Auto-Submitted: auto-generated X-ThisMailContainsUnwantedMimeParts: N The branch main has been updated by yuri: URL: https://cgit.FreeBSD.org/ports/commit/?id=84c8a1dd3e2dd1b11fa800a940c1b53b782f009c commit 84c8a1dd3e2dd1b11fa800a940c1b53b782f009c Author: Yuri Victorovich AuthorDate: 2022-11-17 04:07:32 +0000 Commit: Yuri Victorovich CommitDate: 2022-11-17 04:08:49 +0000 graphics/simpleitk: New port: Simplification layer built on top of the Insight Toolkit (ITK) --- graphics/Makefile | 1 + graphics/simpleitk/Makefile | 36 ++++ graphics/simpleitk/distinfo | 3 + graphics/simpleitk/pkg-descr | 4 + graphics/simpleitk/pkg-plist | 465 +++++++++++++++++++++++++++++++++++++++++++ 5 files changed, 509 insertions(+) diff --git a/graphics/Makefile b/graphics/Makefile index fa1deec8a58d..f86bee5b36a8 100644 --- a/graphics/Makefile +++ b/graphics/Makefile @@ -1075,6 +1075,7 @@ SUBDIR += silgraphite SUBDIR += simage SUBDIR += simple-scan + SUBDIR += simpleitk SUBDIR += simpleviewer SUBDIR += skanlite SUBDIR += skanpage diff --git a/graphics/simpleitk/Makefile b/graphics/simpleitk/Makefile new file mode 100644 index 000000000000..c68bff914452 --- /dev/null +++ b/graphics/simpleitk/Makefile @@ -0,0 +1,36 @@ +PORTNAME= simpleitk +DISTVERSIONPREFIX= v +DISTVERSION= 2.1.1 # last version compatible with InsightToolkit-5.2.1, next versions require InsightToolkit-5.3-RC* +CATEGORIES= graphics + +MAINTAINER= yuri@FreeBSD.org +COMMENT= Simplification layer built on top of the Insight Toolkit (ITK) +WWW= https://simpleitk.org/ + +LICENSE= APACHE20 +LICENSE_FILE= ${WRKSRC}/LICENSE + +LIB_DEPENDS= libhdf5.so:science/hdf5 \ + libITKCommon-${ITK_VER}.so:science/InsightToolkit +TEST_DEPENDS= googletest>0:devel/googletest + +USES= cmake:testing compiler:c++14-lang eigen:3 lua:53 # tests fail to configure due to GTest::GTest related issues, tests might work in newer versions +USE_LDCONFIG= yes + +USE_GITHUB= yes +GH_ACCOUNT= SimpleITK +GH_PROJECT= SimpleITK + +CMAKE_OFF= WRAP_DEFAULT +CMAKE_OFF+= BUILD_TESTING BUILD_EXAMPLES +CMAKE_ON= BUILD_SHARED_LIBS +CMAKE_ARGS= -DSimpleITK_LUA_EXECUTABLE=${LUA_CMD} +CMAKE_TESTING_ON= BUILD_TESTING + +PLIST_SUB+= VER=${DISTVERSION:R} + +post-install: # remove contentless docs + @${RM} -r ${STAGEDIR}${PREFIX}/share + +.include <../../science/InsightToolkit/Makefile.version> +.include diff --git a/graphics/simpleitk/distinfo b/graphics/simpleitk/distinfo new file mode 100644 index 000000000000..03a50127c7f4 --- /dev/null +++ b/graphics/simpleitk/distinfo @@ -0,0 +1,3 @@ +TIMESTAMP = 1668636526 +SHA256 (SimpleITK-SimpleITK-v2.1.1_GH0.tar.gz) = e4c2d29d3d99f6aad361f9f66b68a65946fe7ad7cc23e848e87bdaf1d5384fc6 +SIZE (SimpleITK-SimpleITK-v2.1.1_GH0.tar.gz) = 1945147 diff --git a/graphics/simpleitk/pkg-descr b/graphics/simpleitk/pkg-descr new file mode 100644 index 000000000000..1efde25f0f3e --- /dev/null +++ b/graphics/simpleitk/pkg-descr @@ -0,0 +1,4 @@ +elastix is open source software, based on the well-known Insight Segmentation +and Registration Toolkit (ITK). The software consists of a collection of +algorithms that are commonly used to solve (medical) image registration +problems. diff --git a/graphics/simpleitk/pkg-plist b/graphics/simpleitk/pkg-plist new file mode 100644 index 000000000000..906aca758c1f --- /dev/null +++ b/graphics/simpleitk/pkg-plist @@ -0,0 +1,465 @@ +include/SimpleITK-%%VER%%/Ancillary/FunctionTraits.h +include/SimpleITK-%%VER%%/Ancillary/TypeList.h +include/SimpleITK-%%VER%%/Ancillary/hl_sha1.h +include/SimpleITK-%%VER%%/SimpleITK.h +include/SimpleITK-%%VER%%/SimpleITKBasicFiltersGeneratedHeaders.h +include/SimpleITK-%%VER%%/SimpleITKBasicFiltersGeneratedHeaders.i +include/SimpleITK-%%VER%%/itkHashImageFilter.h +include/SimpleITK-%%VER%%/itkHashImageFilter.hxx +include/SimpleITK-%%VER%%/itkHolderCommand.h +include/SimpleITK-%%VER%%/sitkAbsImageFilter.h +include/SimpleITK-%%VER%%/sitkAbsoluteValueDifferenceImageFilter.h +include/SimpleITK-%%VER%%/sitkAcosImageFilter.h +include/SimpleITK-%%VER%%/sitkAdaptiveHistogramEqualizationImageFilter.h +include/SimpleITK-%%VER%%/sitkAddImageFilter.h +include/SimpleITK-%%VER%%/sitkAdditionalProcedures.h +include/SimpleITK-%%VER%%/sitkAdditiveGaussianNoiseImageFilter.h +include/SimpleITK-%%VER%%/sitkAffineTransform.h +include/SimpleITK-%%VER%%/sitkAggregateLabelMapFilter.h +include/SimpleITK-%%VER%%/sitkAndImageFilter.h +include/SimpleITK-%%VER%%/sitkAntiAliasBinaryImageFilter.h +include/SimpleITK-%%VER%%/sitkApproximateSignedDistanceMapImageFilter.h +include/SimpleITK-%%VER%%/sitkAsinImageFilter.h +include/SimpleITK-%%VER%%/sitkAtan2ImageFilter.h +include/SimpleITK-%%VER%%/sitkAtanImageFilter.h +include/SimpleITK-%%VER%%/sitkBSplineDecompositionImageFilter.h +include/SimpleITK-%%VER%%/sitkBSplineTransform.h +include/SimpleITK-%%VER%%/sitkBSplineTransformInitializerFilter.h +include/SimpleITK-%%VER%%/sitkBasicFilters.h +include/SimpleITK-%%VER%%/sitkBilateralImageFilter.h +include/SimpleITK-%%VER%%/sitkBinShrinkImageFilter.h +include/SimpleITK-%%VER%%/sitkBinaryClosingByReconstructionImageFilter.h +include/SimpleITK-%%VER%%/sitkBinaryContourImageFilter.h +include/SimpleITK-%%VER%%/sitkBinaryDilateImageFilter.h +include/SimpleITK-%%VER%%/sitkBinaryErodeImageFilter.h +include/SimpleITK-%%VER%%/sitkBinaryFillholeImageFilter.h +include/SimpleITK-%%VER%%/sitkBinaryGrindPeakImageFilter.h +include/SimpleITK-%%VER%%/sitkBinaryImageToLabelMapFilter.h +include/SimpleITK-%%VER%%/sitkBinaryMagnitudeImageFilter.h +include/SimpleITK-%%VER%%/sitkBinaryMedianImageFilter.h +include/SimpleITK-%%VER%%/sitkBinaryMinMaxCurvatureFlowImageFilter.h +include/SimpleITK-%%VER%%/sitkBinaryMorphologicalClosingImageFilter.h +include/SimpleITK-%%VER%%/sitkBinaryMorphologicalOpeningImageFilter.h +include/SimpleITK-%%VER%%/sitkBinaryNotImageFilter.h +include/SimpleITK-%%VER%%/sitkBinaryOpeningByReconstructionImageFilter.h +include/SimpleITK-%%VER%%/sitkBinaryProjectionImageFilter.h +include/SimpleITK-%%VER%%/sitkBinaryPruningImageFilter.h +include/SimpleITK-%%VER%%/sitkBinaryReconstructionByDilationImageFilter.h +include/SimpleITK-%%VER%%/sitkBinaryReconstructionByErosionImageFilter.h +include/SimpleITK-%%VER%%/sitkBinaryThinningImageFilter.h +include/SimpleITK-%%VER%%/sitkBinaryThresholdImageFilter.h +include/SimpleITK-%%VER%%/sitkBinaryThresholdProjectionImageFilter.h +include/SimpleITK-%%VER%%/sitkBinomialBlurImageFilter.h +include/SimpleITK-%%VER%%/sitkBitwiseNotImageFilter.h +include/SimpleITK-%%VER%%/sitkBlackTopHatImageFilter.h +include/SimpleITK-%%VER%%/sitkBoundedReciprocalImageFilter.h +include/SimpleITK-%%VER%%/sitkBoxMeanImageFilter.h +include/SimpleITK-%%VER%%/sitkBoxSigmaImageFilter.h +include/SimpleITK-%%VER%%/sitkCannyEdgeDetectionImageFilter.h +include/SimpleITK-%%VER%%/sitkCannySegmentationLevelSetImageFilter.h +include/SimpleITK-%%VER%%/sitkCastImageFilter.h +include/SimpleITK-%%VER%%/sitkCenteredTransformInitializerFilter.h +include/SimpleITK-%%VER%%/sitkCenteredVersorTransformInitializerFilter.h +include/SimpleITK-%%VER%%/sitkChangeLabelImageFilter.h +include/SimpleITK-%%VER%%/sitkChangeLabelLabelMapFilter.h +include/SimpleITK-%%VER%%/sitkCheckerBoardImageFilter.h +include/SimpleITK-%%VER%%/sitkClampImageFilter.h +include/SimpleITK-%%VER%%/sitkClosingByReconstructionImageFilter.h +include/SimpleITK-%%VER%%/sitkCollidingFrontsImageFilter.h +include/SimpleITK-%%VER%%/sitkCommand.h +include/SimpleITK-%%VER%%/sitkCommon.h +include/SimpleITK-%%VER%%/sitkComplexToImaginaryImageFilter.h +include/SimpleITK-%%VER%%/sitkComplexToModulusImageFilter.h +include/SimpleITK-%%VER%%/sitkComplexToPhaseImageFilter.h +include/SimpleITK-%%VER%%/sitkComplexToRealImageFilter.h +include/SimpleITK-%%VER%%/sitkComposeImageFilter.h +include/SimpleITK-%%VER%%/sitkComposeScaleSkewVersor3DTransform.h +include/SimpleITK-%%VER%%/sitkCompositeTransform.h +include/SimpleITK-%%VER%%/sitkConditional.h +include/SimpleITK-%%VER%%/sitkConfidenceConnectedImageFilter.h +include/SimpleITK-%%VER%%/sitkConfigure.h +include/SimpleITK-%%VER%%/sitkConnectedComponentImageFilter.h +include/SimpleITK-%%VER%%/sitkConnectedThresholdImageFilter.h +include/SimpleITK-%%VER%%/sitkConstantPadImageFilter.h +include/SimpleITK-%%VER%%/sitkConvolutionImageFilter.h +include/SimpleITK-%%VER%%/sitkCosImageFilter.h +include/SimpleITK-%%VER%%/sitkCropImageFilter.h +include/SimpleITK-%%VER%%/sitkCurvatureAnisotropicDiffusionImageFilter.h +include/SimpleITK-%%VER%%/sitkCurvatureFlowImageFilter.h +include/SimpleITK-%%VER%%/sitkCyclicShiftImageFilter.h +include/SimpleITK-%%VER%%/sitkDanielssonDistanceMapImageFilter.h +include/SimpleITK-%%VER%%/sitkDemonsRegistrationFilter.h +include/SimpleITK-%%VER%%/sitkDerivativeImageFilter.h +include/SimpleITK-%%VER%%/sitkDetail.h +include/SimpleITK-%%VER%%/sitkDiffeomorphicDemonsRegistrationFilter.h +include/SimpleITK-%%VER%%/sitkDilateObjectMorphologyImageFilter.h +include/SimpleITK-%%VER%%/sitkDiscreteGaussianDerivativeImageFilter.h +include/SimpleITK-%%VER%%/sitkDiscreteGaussianImageFilter.h +include/SimpleITK-%%VER%%/sitkDisplacementFieldJacobianDeterminantFilter.h +include/SimpleITK-%%VER%%/sitkDisplacementFieldTransform.h +include/SimpleITK-%%VER%%/sitkDivideFloorImageFilter.h +include/SimpleITK-%%VER%%/sitkDivideImageFilter.h +include/SimpleITK-%%VER%%/sitkDivideRealImageFilter.h +include/SimpleITK-%%VER%%/sitkDoubleThresholdImageFilter.h +include/SimpleITK-%%VER%%/sitkDualMemberFunctionFactory.h +include/SimpleITK-%%VER%%/sitkDualMemberFunctionFactory.hxx +include/SimpleITK-%%VER%%/sitkEdgePotentialImageFilter.h +include/SimpleITK-%%VER%%/sitkEqualImageFilter.h +include/SimpleITK-%%VER%%/sitkErodeObjectMorphologyImageFilter.h +include/SimpleITK-%%VER%%/sitkEuler2DTransform.h +include/SimpleITK-%%VER%%/sitkEuler3DTransform.h +include/SimpleITK-%%VER%%/sitkEvent.h +include/SimpleITK-%%VER%%/sitkExceptionObject.h +include/SimpleITK-%%VER%%/sitkExpImageFilter.h +include/SimpleITK-%%VER%%/sitkExpNegativeImageFilter.h +include/SimpleITK-%%VER%%/sitkExpandImageFilter.h +include/SimpleITK-%%VER%%/sitkExtractImageFilter.h +include/SimpleITK-%%VER%%/sitkFFTConvolutionImageFilter.h +include/SimpleITK-%%VER%%/sitkFFTNormalizedCorrelationImageFilter.h +include/SimpleITK-%%VER%%/sitkFFTPadImageFilter.h +include/SimpleITK-%%VER%%/sitkFFTShiftImageFilter.h +include/SimpleITK-%%VER%%/sitkFastApproximateRankImageFilter.h +include/SimpleITK-%%VER%%/sitkFastMarchingBaseImageFilter.h +include/SimpleITK-%%VER%%/sitkFastMarchingImageFilter.h +include/SimpleITK-%%VER%%/sitkFastMarchingUpwindGradientImageFilter.h +include/SimpleITK-%%VER%%/sitkFastSymmetricForcesDemonsRegistrationFilter.h +include/SimpleITK-%%VER%%/sitkFlipImageFilter.h +include/SimpleITK-%%VER%%/sitkForwardFFTImageFilter.h +include/SimpleITK-%%VER%%/sitkFunctionCommand.h +include/SimpleITK-%%VER%%/sitkGaborImageSource.h +include/SimpleITK-%%VER%%/sitkGaussianImageSource.h +include/SimpleITK-%%VER%%/sitkGeodesicActiveContourLevelSetImageFilter.h +include/SimpleITK-%%VER%%/sitkGradientAnisotropicDiffusionImageFilter.h +include/SimpleITK-%%VER%%/sitkGradientImageFilter.h +include/SimpleITK-%%VER%%/sitkGradientMagnitudeImageFilter.h +include/SimpleITK-%%VER%%/sitkGradientMagnitudeRecursiveGaussianImageFilter.h +include/SimpleITK-%%VER%%/sitkGradientRecursiveGaussianImageFilter.h +include/SimpleITK-%%VER%%/sitkGrayscaleConnectedClosingImageFilter.h +include/SimpleITK-%%VER%%/sitkGrayscaleConnectedOpeningImageFilter.h +include/SimpleITK-%%VER%%/sitkGrayscaleDilateImageFilter.h +include/SimpleITK-%%VER%%/sitkGrayscaleErodeImageFilter.h +include/SimpleITK-%%VER%%/sitkGrayscaleFillholeImageFilter.h +include/SimpleITK-%%VER%%/sitkGrayscaleGeodesicDilateImageFilter.h +include/SimpleITK-%%VER%%/sitkGrayscaleGeodesicErodeImageFilter.h +include/SimpleITK-%%VER%%/sitkGrayscaleGrindPeakImageFilter.h +include/SimpleITK-%%VER%%/sitkGrayscaleMorphologicalClosingImageFilter.h +include/SimpleITK-%%VER%%/sitkGrayscaleMorphologicalOpeningImageFilter.h +include/SimpleITK-%%VER%%/sitkGreaterEqualImageFilter.h +include/SimpleITK-%%VER%%/sitkGreaterImageFilter.h +include/SimpleITK-%%VER%%/sitkGridImageSource.h +include/SimpleITK-%%VER%%/sitkHConcaveImageFilter.h +include/SimpleITK-%%VER%%/sitkHConvexImageFilter.h +include/SimpleITK-%%VER%%/sitkHMaximaImageFilter.h +include/SimpleITK-%%VER%%/sitkHMinimaImageFilter.h +include/SimpleITK-%%VER%%/sitkHalfHermitianToRealInverseFFTImageFilter.h +include/SimpleITK-%%VER%%/sitkHashImageFilter.h +include/SimpleITK-%%VER%%/sitkHausdorffDistanceImageFilter.h +include/SimpleITK-%%VER%%/sitkHistogramMatchingImageFilter.h +include/SimpleITK-%%VER%%/sitkHuangThresholdImageFilter.h +include/SimpleITK-%%VER%%/sitkIO.h +include/SimpleITK-%%VER%%/sitkImage.h +include/SimpleITK-%%VER%%/sitkImageConvert.h +include/SimpleITK-%%VER%%/sitkImageConvert.hxx +include/SimpleITK-%%VER%%/sitkImageFileReader.h +include/SimpleITK-%%VER%%/sitkImageFileWriter.h +include/SimpleITK-%%VER%%/sitkImageFilter.h +include/SimpleITK-%%VER%%/sitkImageOperators.h +include/SimpleITK-%%VER%%/sitkImageReaderBase.h +include/SimpleITK-%%VER%%/sitkImageRegistrationMethod.h +include/SimpleITK-%%VER%%/sitkImageSeriesReader.h +include/SimpleITK-%%VER%%/sitkImageSeriesWriter.h +include/SimpleITK-%%VER%%/sitkImageViewer.h +include/SimpleITK-%%VER%%/sitkImportImageFilter.h +include/SimpleITK-%%VER%%/sitkIntensityWindowingImageFilter.h +include/SimpleITK-%%VER%%/sitkIntermodesThresholdImageFilter.h +include/SimpleITK-%%VER%%/sitkInterpolator.h +include/SimpleITK-%%VER%%/sitkInverseDeconvolutionImageFilter.h +include/SimpleITK-%%VER%%/sitkInverseDisplacementFieldImageFilter.h +include/SimpleITK-%%VER%%/sitkInverseFFTImageFilter.h +include/SimpleITK-%%VER%%/sitkInvertDisplacementFieldImageFilter.h +include/SimpleITK-%%VER%%/sitkInvertIntensityImageFilter.h +include/SimpleITK-%%VER%%/sitkIsoContourDistanceImageFilter.h +include/SimpleITK-%%VER%%/sitkIsoDataThresholdImageFilter.h +include/SimpleITK-%%VER%%/sitkIsolatedConnectedImageFilter.h +include/SimpleITK-%%VER%%/sitkIsolatedWatershedImageFilter.h +include/SimpleITK-%%VER%%/sitkIterativeInverseDisplacementFieldImageFilter.h +include/SimpleITK-%%VER%%/sitkJoinSeriesImageFilter.h +include/SimpleITK-%%VER%%/sitkKernel.h +include/SimpleITK-%%VER%%/sitkKittlerIllingworthThresholdImageFilter.h +include/SimpleITK-%%VER%%/sitkLabelContourImageFilter.h +include/SimpleITK-%%VER%%/sitkLabelImageToLabelMapFilter.h +include/SimpleITK-%%VER%%/sitkLabelIntensityStatisticsImageFilter.h +include/SimpleITK-%%VER%%/sitkLabelMapContourOverlayImageFilter.h +include/SimpleITK-%%VER%%/sitkLabelMapMaskImageFilter.h +include/SimpleITK-%%VER%%/sitkLabelMapOverlayImageFilter.h +include/SimpleITK-%%VER%%/sitkLabelMapToBinaryImageFilter.h +include/SimpleITK-%%VER%%/sitkLabelMapToLabelImageFilter.h 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