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Fri, 4 Nov 2022 05:31:03 GMT (envelope-from git) Date: Fri, 4 Nov 2022 05:31:03 GMT Message-Id: <202211040531.2A45V3Wb056262@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: Yuri Victorovich Subject: git: 32231b9e87f7 - main - science/ttk: New port: Topology ToolKit: Topological data analysis and visualization List-Id: Commits to the main branch of the FreeBSD ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-main List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-dev-commits-ports-main@freebsd.org X-BeenThere: dev-commits-ports-main@freebsd.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: yuri X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: 32231b9e87f7d8ef0526b08c7a3407fd2dadd9d3 Auto-Submitted: auto-generated ARC-Message-Signature: i=1; a=rsa-sha256; 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mx1.freebsd.org; none X-ThisMailContainsUnwantedMimeParts: N The branch main has been updated by yuri: URL: https://cgit.FreeBSD.org/ports/commit/?id=32231b9e87f7d8ef0526b08c7a3407fd2dadd9d3 commit 32231b9e87f7d8ef0526b08c7a3407fd2dadd9d3 Author: Yuri Victorovich AuthorDate: 2022-11-04 05:30:15 +0000 Commit: Yuri Victorovich CommitDate: 2022-11-04 05:31:00 +0000 science/ttk: New port: Topology ToolKit: Topological data analysis and visualization --- science/Makefile | 1 + science/ttk/Makefile | 38 ++ science/ttk/distinfo | 3 + science/ttk/pkg-descr | 4 + science/ttk/pkg-plist | 999 ++++++++++++++++++++++++++++++++++++++++++++++++++ 5 files changed, 1045 insertions(+) diff --git a/science/Makefile b/science/Makefile index cbfb80cbcf9d..a899e6c2ae0d 100644 --- a/science/Makefile +++ b/science/Makefile @@ -456,6 +456,7 @@ SUBDIR += thermofun SUBDIR += tinker SUBDIR += trilinos + SUBDIR += ttk SUBDIR += tweedledum SUBDIR += udunits SUBDIR += ukrmol+ diff --git a/science/ttk/Makefile b/science/ttk/Makefile new file mode 100644 index 000000000000..3ca3b6aa88f0 --- /dev/null +++ b/science/ttk/Makefile @@ -0,0 +1,38 @@ +PORTNAME= ttk +DISTVERSION= 1.1.0 +CATEGORIES= science + +MAINTAINER= yuri@FreeBSD.org +COMMENT= Topology ToolKit: Topological data analysis and visualization +WWW= https://topology-tool-kit.github.io/ + +LICENSE= BSD4CLAUSE +LICENSE_FILE= ${WRKSRC}/LICENSE + +PY_DEPENDS= ${PYNUMPY} \ + ${PYTHON_PKGNAMEPREFIX}scikit-build>0:devel/py-scikit-build@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}scipy>0:science/py-scipy@${PY_FLAVOR} +BUILD_DEPENDS= ${LOCALBASE}/include/boost/functional/hash.hpp:devel/boost-libs \ + cli11>0:devel/cli11 \ + exprtk>0:math/exprtk \ + spectra>0:math/spectra \ + utf8cpp>0:devel/utf8cpp \ + websocketpp>0:devel/websocketpp \ + ${PY_DEPENDS} +LIB_DEPENDS= libcgraph.so:graphics/graphviz \ + libembree3.so:graphics/embree \ + libfreetype.so:print/freetype2 \ + libjsoncpp.so:devel/jsoncpp \ + libvtkRenderingCore-pv${PARAVIEW_VER}.so:science/paraview \ + libzfp.so:devel/zfp +RUN_DEPENDS= ${PY_DEPENDS} + +USES= cmake eigen:3 compiler:c++11-lang gl python sqlite xorg +USE_GL= glew +USE_XORG= x11 + +USE_GITHUB= yes +GH_ACCOUNT= topology-tool-kit + +.include <../../science/paraview/Makefile.version> +.include diff --git a/science/ttk/distinfo b/science/ttk/distinfo new file mode 100644 index 000000000000..2303e604b9dd --- /dev/null +++ b/science/ttk/distinfo @@ -0,0 +1,3 @@ +TIMESTAMP = 1667420991 +SHA256 (topology-tool-kit-ttk-1.1.0_GH0.tar.gz) = 1af91baca5b07ea1cb46c022229cb9fb43f42cdb9ac65464f8efde2ee48ad31e +SIZE (topology-tool-kit-ttk-1.1.0_GH0.tar.gz) = 38197117 diff --git a/science/ttk/pkg-descr b/science/ttk/pkg-descr new file mode 100644 index 000000000000..5948794ae788 --- /dev/null +++ b/science/ttk/pkg-descr @@ -0,0 +1,4 @@ +TTK - The Topology ToolKit - is an open-source library for efficient, generic +and easy topological data analysis and visualization. TTK is written in C++ and +comes with a variety of APIs (C++, VTK/C++, Python, PVPython), standalone +programs and a ParaView plugin. diff --git a/science/ttk/pkg-plist b/science/ttk/pkg-plist new file mode 100644 index 000000000000..6aa1a5996053 --- /dev/null +++ b/science/ttk/pkg-plist @@ -0,0 +1,999 @@ +bin/plugins/TopologyToolKit/TopologyToolKit.so +bin/ttkContinuousScatterPlotCmd +bin/ttkContourAroundPointCmd +bin/ttkContourForestsCmd +bin/ttkFTMTreeCmd +bin/ttkFTRGraphCmd +bin/ttkGeometrySmootherCmd +bin/ttkGeometrySmootherGui +bin/ttkHelloWorldCmd +bin/ttkJacobiSetCmd +bin/ttkLDistanceCmd +bin/ttkMandatoryCriticalPointsCmd +bin/ttkManifoldCheckCmd +bin/ttkMeshSubdivisionCmd +bin/ttkMetricDistortionCmd +bin/ttkMorseSmaleComplexCmd +bin/ttkPersistenceDiagramCmd +bin/ttkPointMergerCmd +bin/ttkReebSpaceCmd +bin/ttkScalarFieldCriticalPointsCmd +bin/ttkScalarFieldSmootherCmd +bin/ttkUncertainDataEstimatorCmd +include/ttk/base/AbstractTriangulation.h +include/ttk/base/ApproximateTopology.h +include/ttk/base/ArrayPreconditioning.h +include/ttk/base/AssignmentAuction.h +include/ttk/base/AssignmentExhaustive.h +include/ttk/base/AssignmentMunkres.h +include/ttk/base/AssignmentMunkresImpl.h +include/ttk/base/AssignmentSolver.h +include/ttk/base/BarycentricSubdivision.h +include/ttk/base/BaseClass.h +include/ttk/base/BottleneckDistance.h +include/ttk/base/BoundingVolumeHierarchy.h +include/ttk/base/CTA_contourtree.h +include/ttk/base/Cache.h +include/ttk/base/CellArray.h +include/ttk/base/CellArray_new.h +include/ttk/base/CinemaImaging.h +include/ttk/base/CinemaImagingEmbree.h +include/ttk/base/CinemaImagingNative.h +include/ttk/base/CinemaQuery.h +include/ttk/base/CommandLineParser.h +include/ttk/base/CompactTriangulation.h +include/ttk/base/CompactTriangulationPreconditioning.h +include/ttk/base/ConnectedComponents.h +include/ttk/base/ContinuousScatterPlot.h +include/ttk/base/ContourAroundPoint.hpp +include/ttk/base/ContourForests.h +include/ttk/base/ContourForestsTemplate.h +include/ttk/base/ContourForestsTree.h +include/ttk/base/ContourTree.h +include/ttk/base/ContourTreeAlignment.h +include/ttk/base/DataTypes.h +include/ttk/base/Debug.h +include/ttk/base/DeprecatedDataTypes.h +include/ttk/base/DeprecatedNode.h +include/ttk/base/DeprecatedSegmentation.h +include/ttk/base/DeprecatedStructures.h +include/ttk/base/DeprecatedSuperArc.h +include/ttk/base/DepthImageBasedGeometryApproximation.h +include/ttk/base/Dijkstra.h +include/ttk/base/DimensionReduction.h +include/ttk/base/DiscreteGradient.h +include/ttk/base/DiscreteGradient_Template.h +include/ttk/base/DiscreteMorseSandwich.h +include/ttk/base/DistanceField.h +include/ttk/base/DynamicGraph.h +include/ttk/base/DynamicGraph_Template.h +include/ttk/base/DynamicTree.h +include/ttk/base/EigenField.h +include/ttk/base/ExplicitTriangulation.h +include/ttk/base/ExtendedUF.h +include/ttk/base/FTMAtomicUF.h +include/ttk/base/FTMAtomicVector.h +include/ttk/base/FTMDataTypes.h +include/ttk/base/FTMNode.h +include/ttk/base/FTMSegmentation.h +include/ttk/base/FTMStructures.h +include/ttk/base/FTMSuperArc.h +include/ttk/base/FTMTree.h +include/ttk/base/FTMTreePP.h +include/ttk/base/FTMTreePPUtils.h +include/ttk/base/FTMTreeUtils.h +include/ttk/base/FTMTreeUtils_Template.h +include/ttk/base/FTMTree_CT.h +include/ttk/base/FTMTree_CT_Template.h +include/ttk/base/FTMTree_MT.h +include/ttk/base/FTMTree_MT_Template.h +include/ttk/base/FTMTree_Template.h +include/ttk/base/FTRAtomicUF.h +include/ttk/base/FTRAtomicVector.h +include/ttk/base/FTRCommon.h +include/ttk/base/FTRDataTypes.h +include/ttk/base/FTRGraph.h +include/ttk/base/FTRGraphPrint_Template.h +include/ttk/base/FTRGraphPrivate_Template.h +include/ttk/base/FTRGraph_Template.h +include/ttk/base/FTRLazy.h +include/ttk/base/FTRNode.h +include/ttk/base/FTRPropagation.h +include/ttk/base/FTRPropagations.h +include/ttk/base/FTRScalars.h +include/ttk/base/FTRSegmentation.h +include/ttk/base/FTRSuperArc.h +include/ttk/base/FTRTasks.h +include/ttk/base/FiberSurface.h +include/ttk/base/FlatJaggedArray.h +include/ttk/base/GabowTarjan.h +include/ttk/base/GaussianPointCloud.h +include/ttk/base/Geometry.h +include/ttk/base/Graph.h +include/ttk/base/Graph_Template.h +include/ttk/base/HarmonicField.h +include/ttk/base/HelloWorld.h +include/ttk/base/Icosphere.h +include/ttk/base/ImplicitPreconditions.h +include/ttk/base/ImplicitTriangulation.h +include/ttk/base/IntegralLines.h +include/ttk/base/JacobiSet.h +include/ttk/base/JacobiSet_Template.h +include/ttk/base/KDTree.h +include/ttk/base/LDistance.h +include/ttk/base/LDistanceMatrix.h +include/ttk/base/Laplacian.h +include/ttk/base/LocalizedTopologicalSimplification.h +include/ttk/base/LowestCommonAncestor.h +include/ttk/base/MPIUtils.h +include/ttk/base/MandatoryCriticalPoints.h +include/ttk/base/ManifoldCheck.h +include/ttk/base/MergeTree.h +include/ttk/base/MergeTreeBarycenter.h +include/ttk/base/MergeTreeBase.h +include/ttk/base/MergeTreeClustering.h +include/ttk/base/MergeTreeDistance.h +include/ttk/base/MergeTreeDistanceMatrix.h +include/ttk/base/MergeTreeTemplate.h +include/ttk/base/MergeTreeTemporalReductionDecoding.h +include/ttk/base/MergeTreeTemporalReductionEncoding.h +include/ttk/base/MergeTreeUtils.h +include/ttk/base/MergeTreeVisualization.h +include/ttk/base/Mesh.h +include/ttk/base/MeshGraph.h +include/ttk/base/MetricDistortion.h +include/ttk/base/MorphologicalOperators.h +include/ttk/base/MorseSmaleComplex.h +include/ttk/base/MorseSmaleQuadrangulation.h +include/ttk/base/MultiresTopology.h +include/ttk/base/MultiresTriangulation.h +include/ttk/base/Octree.h +include/ttk/base/OneSkeleton.h +include/ttk/base/OpenMP.h +include/ttk/base/OrderDisambiguation.h +include/ttk/base/Os.h +include/ttk/base/OtherCompression.h +include/ttk/base/PDBarycenter.h +include/ttk/base/PDBarycenterImpl.h +include/ttk/base/PDClustering.h +include/ttk/base/PDClusteringImpl.h +include/ttk/base/PeriodicImplicitTriangulation.h +include/ttk/base/PeriodicPreconditions.h +include/ttk/base/PersistenceCurve.h +include/ttk/base/PersistenceDiagram.h +include/ttk/base/PersistenceDiagramAuction.h +include/ttk/base/PersistenceDiagramAuctionActor.h +include/ttk/base/PersistenceDiagramAuctionImpl.h +include/ttk/base/PersistenceDiagramBarycenter.h +include/ttk/base/PersistenceDiagramClustering.h +include/ttk/base/PersistenceDiagramCompression.h +include/ttk/base/PersistenceDiagramDistanceMatrix.h +include/ttk/base/PersistenceDiagramUtils.h +include/ttk/base/PersistentGenerators.h +include/ttk/base/PersistentSimplexPairs.h +include/ttk/base/PlanarGraphLayout.h +include/ttk/base/ProgramBase.h +include/ttk/base/ProgressiveTopology.h +include/ttk/base/ProjectionFromTable.h +include/ttk/base/Propagation.h +include/ttk/base/QuadrangulationSubdivision.h +include/ttk/base/RangeDrivenOctree.h +include/ttk/base/RangeMinimumQuery.h +include/ttk/base/Ray.h +include/ttk/base/ReebSpace.h +include/ttk/base/RipsComplex.h +include/ttk/base/ScalarFieldCriticalPoints.h +include/ttk/base/ScalarFieldSmoother.h +include/ttk/base/Shuffle.h +include/ttk/base/SurfaceGeometrySmoother.h +include/ttk/base/ThreeSkeleton.h +include/ttk/base/Timer.h +include/ttk/base/TopologicalCompression.h +include/ttk/base/TopologicalSimplification.h +include/ttk/base/TopologyToolKit.h +include/ttk/base/TrackingFromFields.h +include/ttk/base/TrackingFromOverlap.h +include/ttk/base/TrackingFromPersistenceDiagrams.h +include/ttk/base/Triangulation.h +include/ttk/base/TwoSkeleton.h +include/ttk/base/UncertainDataEstimator.h +include/ttk/base/UnionFind.h +include/ttk/base/VisitedMask.h +include/ttk/base/WebSocketIO.cpp +include/ttk/base/WebSocketIO.h +include/ttk/base/Wrapper.h +include/ttk/base/ZeroSkeleton.h +include/ttk/base/buildWeights.h +include/ttk/vtk/ttkAlgorithm.h +include/ttk/vtk/ttkAlgorithmModule.h +include/ttk/vtk/ttkArrayEditor.h +include/ttk/vtk/ttkArrayEditorModule.h +include/ttk/vtk/ttkArrayPreconditioning.h +include/ttk/vtk/ttkArrayPreconditioningModule.h +include/ttk/vtk/ttkBarycentricSubdivision.h +include/ttk/vtk/ttkBarycentricSubdivisionModule.h +include/ttk/vtk/ttkBlockAggregator.h +include/ttk/vtk/ttkBlockAggregatorModule.h +include/ttk/vtk/ttkBottleneckDistance.h +include/ttk/vtk/ttkBottleneckDistanceModule.h +include/ttk/vtk/ttkBottleneckDistanceUtils.h +include/ttk/vtk/ttkCinemaDarkroomCamera.h +include/ttk/vtk/ttkCinemaDarkroomColorMapping.h +include/ttk/vtk/ttkCinemaDarkroomCompositing.h +include/ttk/vtk/ttkCinemaDarkroomFXAA.h +include/ttk/vtk/ttkCinemaDarkroomIBS.h +include/ttk/vtk/ttkCinemaDarkroomModule.h +include/ttk/vtk/ttkCinemaDarkroomNoise.h +include/ttk/vtk/ttkCinemaDarkroomSSAO.h +include/ttk/vtk/ttkCinemaDarkroomSSDoF.h +include/ttk/vtk/ttkCinemaDarkroomSSSAO.h +include/ttk/vtk/ttkCinemaDarkroomShader.h +include/ttk/vtk/ttkCinemaImaging.h +include/ttk/vtk/ttkCinemaImagingEmbree.h +include/ttk/vtk/ttkCinemaImagingModule.h +include/ttk/vtk/ttkCinemaImagingNative.h +include/ttk/vtk/ttkCinemaImagingVTK.h +include/ttk/vtk/ttkCinemaProductReader.h +include/ttk/vtk/ttkCinemaProductReaderModule.h +include/ttk/vtk/ttkCinemaQuery.h +include/ttk/vtk/ttkCinemaQueryModule.h +include/ttk/vtk/ttkCinemaReader.h +include/ttk/vtk/ttkCinemaReaderModule.h +include/ttk/vtk/ttkCinemaWriter.h +include/ttk/vtk/ttkCinemaWriterModule.h +include/ttk/vtk/ttkComponentSize.h +include/ttk/vtk/ttkComponentSizeModule.h +include/ttk/vtk/ttkConnectedComponents.h +include/ttk/vtk/ttkConnectedComponentsModule.h +include/ttk/vtk/ttkContinuousScatterPlot.h +include/ttk/vtk/ttkContinuousScatterPlotModule.h +include/ttk/vtk/ttkContourAroundPoint.h +include/ttk/vtk/ttkContourAroundPointModule.h +include/ttk/vtk/ttkContourForests.h +include/ttk/vtk/ttkContourForestsModule.h +include/ttk/vtk/ttkContourTreeAlignment.h +include/ttk/vtk/ttkContourTreeAlignmentModule.h 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