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(8.16.1/8.16.1) with ESMTP id 25O7KoDT085995; Fri, 24 Jun 2022 07:20:50 GMT (envelope-from git@gitrepo.freebsd.org) Received: (from git@localhost) by gitrepo.freebsd.org (8.16.1/8.16.1/Submit) id 25O7KoJD085994; Fri, 24 Jun 2022 07:20:50 GMT (envelope-from git) Date: Fri, 24 Jun 2022 07:20:50 GMT Message-Id: <202206240720.25O7KoJD085994@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: Yuri Victorovich Subject: git: 5d253e6fc141 - main - biology/seqan3: Update 3.1.0 -> 3.2.0 List-Id: Commits to the main branch of the FreeBSD ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-main List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-dev-commits-ports-main@freebsd.org X-BeenThere: dev-commits-ports-main@freebsd.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: yuri X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: 5d253e6fc141c82b1124fd1a5d36b642d4dd047e Auto-Submitted: auto-generated ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1656055250; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=w33JVj11nglN/m/ZLc4MO5ZRPpJH1cPFSDdtf/y8diU=; b=V1R18246S33brq/Vsj6WbOKfc+/ceevc8P/U7KpQpMRf/dxuztec8UTb933ZnFDRQjFHKV fO8MONRfoEVcz5lmtr4s3PJ0UbPSaKNcn74CUl22md96jaw8nw01iua7sEh68qeIsVwuea sMCKciljAFV9Wsvi31Zx69LctCPyBQ6hnM2OQ4FwYm3Zbnwn3uyq0Gx42el6Fm38hwoTy9 l62oNFyo/sXszGxCgkj15vQrU/Y+c/BQ5GJZ8giBDjfjxm4leRZIeAcn7/eqmYC16SZFYR 7kxhxey+2w2LEXtP415Szc8ibiU0gPfBKkEZqOaRM0isPYJvroRnYeNj8yYvhg== ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1656055250; a=rsa-sha256; cv=none; b=OEXIQ4vJ+EuqyMY7/qd87YZq1SDBGjqPuwiuuIk2dFjAimnzUnqU7t6iHy94g1PPly8z8g Vutojz5AMo9qdYtA/Pn3mWyGJlLd7UUoN+YctcA0QVmvRjcG6u7c8nmBQRhgKRtWXdnIZ+ 8rTwJ56twN+/wOmUBpMKZHWWFU1ZCf41jkrvSsjYtBWoQyz3NmP/+n4I/V3t5izC6EPLRe DfwMx3UjyQTHKDXB8+bNqeXuwancnDWusrLGbJUnADLqq6AGJk2mS8PCpdpDu3v6BwTJlV yAdmBLlnM13mZTO1Kb98GNzRBHksp3kDG/I8WjPfDr9m5HK/ZFw9qFRZw3xPew== ARC-Authentication-Results: i=1; mx1.freebsd.org; none X-ThisMailContainsUnwantedMimeParts: N The branch main has been updated by yuri: URL: https://cgit.FreeBSD.org/ports/commit/?id=5d253e6fc141c82b1124fd1a5d36b642d4dd047e commit 5d253e6fc141c82b1124fd1a5d36b642d4dd047e Author: Yuri Victorovich AuthorDate: 2022-06-24 05:17:31 +0000 Commit: Yuri Victorovich CommitDate: 2022-06-24 07:20:46 +0000 biology/seqan3: Update 3.1.0 -> 3.2.0 Reported by: portscout --- biology/seqan3/Makefile | 2 +- biology/seqan3/distinfo | 6 +++--- biology/seqan3/pkg-plist | 18 +++++++++++++----- 3 files changed, 17 insertions(+), 9 deletions(-) diff --git a/biology/seqan3/Makefile b/biology/seqan3/Makefile index b465d96ca305..61b3c826849f 100644 --- a/biology/seqan3/Makefile +++ b/biology/seqan3/Makefile @@ -1,5 +1,5 @@ PORTNAME= seqan3 -DISTVERSION= 3.1.0 +DISTVERSION= 3.2.0 CATEGORIES= biology devel math MAINTAINER= yuri@FreeBSD.org diff --git a/biology/seqan3/distinfo b/biology/seqan3/distinfo index 3aaf97f0a829..d15df1a95c74 100644 --- a/biology/seqan3/distinfo +++ b/biology/seqan3/distinfo @@ -1,5 +1,5 @@ -TIMESTAMP = 1636950170 -SHA256 (seqan-seqan3-3.1.0_GH0.tar.gz) = 5dc87c5da064a7d1a5afec96c6c1da79a6d1ec6a045e1fe100166c88f559ce51 -SIZE (seqan-seqan3-3.1.0_GH0.tar.gz) = 1447998 +TIMESTAMP = 1656041922 +SHA256 (seqan-seqan3-3.2.0_GH0.tar.gz) = 80d41dd035407cfec83eb3a4466d0421adc27129af684290c0c4da31421e7276 +SIZE (seqan-seqan3-3.2.0_GH0.tar.gz) = 1522246 SHA256 (xxsds-sdsl-lite-cf9ff4a_GH0.tar.gz) = 9e328d00c3bdead09cfa35e75e20ace0e668d6dac0436ce9256f2156088f22e8 SIZE (xxsds-sdsl-lite-cf9ff4a_GH0.tar.gz) = 1166065 diff --git a/biology/seqan3/pkg-plist b/biology/seqan3/pkg-plist index dc4dab769c9a..4883e10f6d4b 100644 --- a/biology/seqan3/pkg-plist +++ b/biology/seqan3/pkg-plist @@ -119,6 +119,7 @@ include/seqan3/alphabet/container/all.hpp include/seqan3/alphabet/container/bitpacked_sequence.hpp include/seqan3/alphabet/container/concatenated_sequences.hpp include/seqan3/alphabet/detail/alphabet_proxy.hpp +include/seqan3/alphabet/detail/concept.hpp include/seqan3/alphabet/detail/convert.hpp include/seqan3/alphabet/detail/debug_stream_alphabet.hpp include/seqan3/alphabet/exception.hpp @@ -160,6 +161,7 @@ include/seqan3/alphabet/structure/structured_aa.hpp include/seqan3/alphabet/structure/structured_rna.hpp include/seqan3/alphabet/structure/wuss.hpp include/seqan3/alphabet/views/all.hpp +include/seqan3/alphabet/views/char_strictly_to.hpp include/seqan3/alphabet/views/char_to.hpp include/seqan3/alphabet/views/complement.hpp include/seqan3/alphabet/views/rank_to.hpp @@ -168,9 +170,11 @@ include/seqan3/alphabet/views/to_rank.hpp include/seqan3/alphabet/views/translate.hpp include/seqan3/alphabet/views/translate_join.hpp include/seqan3/alphabet/views/trim_quality.hpp +include/seqan3/alphabet/views/validate_char_for.hpp include/seqan3/argument_parser/all.hpp include/seqan3/argument_parser/argument_parser.hpp include/seqan3/argument_parser/auxiliary.hpp +include/seqan3/argument_parser/detail/concept.hpp include/seqan3/argument_parser/detail/format_base.hpp include/seqan3/argument_parser/detail/format_help.hpp include/seqan3/argument_parser/detail/format_html.hpp @@ -180,14 +184,9 @@ include/seqan3/argument_parser/detail/terminal.hpp include/seqan3/argument_parser/detail/version_check.hpp include/seqan3/argument_parser/exceptions.hpp include/seqan3/argument_parser/validators.hpp -include/seqan3/contrib/charconv/LICENSE.TXT -include/seqan3/contrib/charconv/charconv -include/seqan3/contrib/charconv/charconv.cpp -include/seqan3/contrib/charconv/charconv_pre.hpp include/seqan3/contrib/parallel/buffer_queue.hpp include/seqan3/contrib/parallel/serialised_resource_pool.hpp include/seqan3/contrib/parallel/suspendable_queue.hpp -include/seqan3/contrib/span/span include/seqan3/contrib/stream/bgzf_istream.hpp include/seqan3/contrib/stream/bgzf_ostream.hpp include/seqan3/contrib/stream/bgzf_stream_util.hpp @@ -223,6 +222,8 @@ include/seqan3/core/debug_stream/range.hpp include/seqan3/core/debug_stream/tuple.hpp include/seqan3/core/debug_stream/variant.hpp include/seqan3/core/detail/all.hpp +include/seqan3/core/detail/all_view.hpp +include/seqan3/core/detail/copyable_wrapper.hpp include/seqan3/core/detail/customisation_point.hpp include/seqan3/core/detail/deferred_crtp_base.hpp include/seqan3/core/detail/empty_type.hpp @@ -467,11 +468,14 @@ include/seqan3/submodules/sdsl-lite/include/sdsl/wt_int.hpp include/seqan3/submodules/sdsl-lite/include/sdsl/wt_pc.hpp include/seqan3/submodules/sdsl-lite/include/sdsl/wt_rlmn.hpp include/seqan3/utility/all.hpp +include/seqan3/utility/bloom_filter/all.hpp +include/seqan3/utility/bloom_filter/bloom_filter.hpp include/seqan3/utility/char_operations/all.hpp include/seqan3/utility/char_operations/predicate.hpp include/seqan3/utility/char_operations/predicate_detail.hpp include/seqan3/utility/char_operations/pretty_print.hpp include/seqan3/utility/char_operations/transform.hpp +include/seqan3/utility/concept.hpp include/seqan3/utility/concept/all.hpp include/seqan3/utility/concept/exposition_only/core_language.hpp include/seqan3/utility/container/aligned_allocator.hpp @@ -493,6 +497,7 @@ include/seqan3/utility/parallel/detail/reader_writer_manager.hpp include/seqan3/utility/parallel/detail/spin_delay.hpp include/seqan3/utility/range/all.hpp include/seqan3/utility/range/concept.hpp +include/seqan3/utility/range/to.hpp include/seqan3/utility/simd/algorithm.hpp include/seqan3/utility/simd/all.hpp include/seqan3/utility/simd/concept.hpp @@ -510,6 +515,7 @@ include/seqan3/utility/simd/views/all.hpp include/seqan3/utility/simd/views/iota_simd.hpp include/seqan3/utility/simd/views/to_simd.hpp include/seqan3/utility/tuple/all.hpp +include/seqan3/utility/tuple/common_pair.hpp include/seqan3/utility/tuple/common_tuple.hpp include/seqan3/utility/tuple/concept.hpp include/seqan3/utility/tuple/pod_tuple.hpp @@ -532,6 +538,8 @@ include/seqan3/utility/views/all.hpp include/seqan3/utility/views/chunk.hpp include/seqan3/utility/views/convert.hpp include/seqan3/utility/views/deep.hpp +include/seqan3/utility/views/detail/helper.hpp +include/seqan3/utility/views/detail/non_propagating_cache.hpp include/seqan3/utility/views/elements.hpp include/seqan3/utility/views/enforce_random_access.hpp include/seqan3/utility/views/interleave.hpp