From nobody Wed Jul 06 23:02:59 2022 X-Original-To: dev-commits-ports-main@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 727F187F95E for ; Wed, 6 Jul 2022 23:03:11 +0000 (UTC) (envelope-from junchoon@dec.sakura.ne.jp) Received: from www121.sakura.ne.jp (www121.sakura.ne.jp [153.125.133.21]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (Client did not present a certificate) by mx1.freebsd.org (Postfix) with ESMTPS id 4LdZp56lZ4z4kfW; Wed, 6 Jul 2022 23:03:09 +0000 (UTC) (envelope-from junchoon@dec.sakura.ne.jp) Received: from kalamity.joker.local (123-1-85-147.area1b.commufa.jp [123.1.85.147]) (authenticated bits=0) by www121.sakura.ne.jp (8.16.1/8.16.1/[SAKURA-WEB]/20201212) with ESMTPA id 266N2x3d025920; Thu, 7 Jul 2022 08:02:59 +0900 (JST) (envelope-from junchoon@dec.sakura.ne.jp) Date: Thu, 7 Jul 2022 08:02:59 +0900 From: Tomoaki AOKI To: Yuri Victorovich Cc: dev-commits-ports-main@freebsd.org Subject: Re: git: 1cb8897f610a - main - biology/ngs-sdk: Remove, ngs was moved into sra-tools Message-Id: <20220707080259.41b6351cbb3d8b1545d1207c@dec.sakura.ne.jp> Organization: Junchoon corps X-Mailer: Sylpheed 3.7.0 (GTK+ 2.24.33; amd64-portbld-freebsd13.0) List-Id: Commits to the main branch of the FreeBSD ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-main List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-dev-commits-ports-main@freebsd.org X-BeenThere: dev-commits-ports-main@freebsd.org Mime-Version: 1.0 Content-Type: text/plain; charset=US-ASCII Content-Transfer-Encoding: 7bit X-Rspamd-Queue-Id: 4LdZp56lZ4z4kfW X-Spamd-Bar: / Authentication-Results: mx1.freebsd.org; dkim=none; dmarc=none; spf=none (mx1.freebsd.org: domain of junchoon@dec.sakura.ne.jp has no SPF policy when checking 153.125.133.21) smtp.mailfrom=junchoon@dec.sakura.ne.jp X-Spamd-Result: default: False [-0.57 / 15.00]; FAKE_REPLY(1.00)[]; RCVD_VIA_SMTP_AUTH(0.00)[]; ARC_NA(0.00)[]; FROM_HAS_DN(0.00)[]; TO_DN_SOME(0.00)[]; MV_CASE(0.50)[]; TO_MATCH_ENVRCPT_ALL(0.00)[]; MIME_GOOD(-0.10)[text/plain]; RCVD_TLS_LAST(0.00)[]; DMARC_NA(0.00)[sakura.ne.jp]; AUTH_NA(1.00)[]; HAS_ORG_HEADER(0.00)[]; NEURAL_HAM_MEDIUM(-0.99)[-0.985]; NEURAL_HAM_LONG(-1.00)[-0.999]; RCPT_COUNT_TWO(0.00)[2]; NEURAL_HAM_SHORT(-0.99)[-0.988]; MLMMJ_DEST(0.00)[dev-commits-ports-main]; R_SPF_NA(0.00)[no SPF record]; FROM_EQ_ENVFROM(0.00)[]; R_DKIM_NA(0.00)[]; MIME_TRACE(0.00)[0:+]; ASN(0.00)[asn:7684, ipnet:153.125.128.0/18, country:JP]; RCVD_COUNT_TWO(0.00)[2]; MID_RHS_MATCH_FROM(0.00)[]; RECEIVED_SPAMHAUS_PBL(0.00)[123.1.85.147:received] X-ThisMailContainsUnwantedMimeParts: N Hi. This broke INDEX build. biology/sra-tools still has BUILD_DEPENDS= bash:shells/bash \ ${LOCALBASE}/lib/libngs-c++.a:biology/ngs-sdk > The branch main has been updated by yuri: > > URL: https://cgit.FreeBSD.org/ports/commit/?id=1cb8897f610a381ddf2802eb09acfba97b15b505 > > commit 1cb8897f610a381ddf2802eb09acfba97b15b505 > Author: Yuri Victorovich > AuthorDate: 2022-07-06 19:03:11 +0000 > Commit: Yuri Victorovich > CommitDate: 2022-07-06 19:03:11 +0000 > > biology/ngs-sdk: Remove, ngs was moved into sra-tools > --- > MOVED | 1 + > biology/Makefile | 1 - > biology/ngs-sdk/Makefile | 43 --------- > biology/ngs-sdk/distinfo | 3 - > .../ngs-sdk/files/patch-ngs-sdk_Makefile.install | 11 --- > .../files/patch-ngs-sdk_setup_konfigure.perl | 37 -------- > biology/ngs-sdk/pkg-descr | 12 --- > biology/ngs-sdk/pkg-plist | 100 --------------------- > 8 files changed, 1 insertion(+), 207 deletions(-) (snip) -- Tomoaki AOKI