git: 8615039c0cdd - main - biology/viennarna: Update 2.4.18 -> 2.5.0
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Date: Tue, 25 Jan 2022 05:44:25 UTC
The branch main has been updated by yuri: URL: https://cgit.FreeBSD.org/ports/commit/?id=8615039c0cddc4eb7cc313105ad85ca7e1e0b0ff commit 8615039c0cddc4eb7cc313105ad85ca7e1e0b0ff Author: Yuri Victorovich <yuri@FreeBSD.org> AuthorDate: 2022-01-25 05:03:02 +0000 Commit: Yuri Victorovich <yuri@FreeBSD.org> CommitDate: 2022-01-25 05:44:21 +0000 biology/viennarna: Update 2.4.18 -> 2.5.0 --- biology/viennarna/Makefile | 5 ++--- biology/viennarna/distinfo | 6 +++--- biology/viennarna/pkg-plist | 5 +++++ 3 files changed, 10 insertions(+), 6 deletions(-) diff --git a/biology/viennarna/Makefile b/biology/viennarna/Makefile index 5f0456b22f22..5b3d547a7f14 100644 --- a/biology/viennarna/Makefile +++ b/biology/viennarna/Makefile @@ -1,8 +1,7 @@ PORTNAME= viennarna -DISTVERSION= 2.4.18 -PORTREVISION= 2 +DISTVERSION= 2.5.0 CATEGORIES= biology -MASTER_SITES= https://www.tbi.univie.ac.at/RNA/download/sourcecode/2_4_x/ +MASTER_SITES= https://www.tbi.univie.ac.at/RNA/download/sourcecode/2_5_x/ DISTNAME= ViennaRNA-${DISTVERSION} MAINTAINER= yuri@FreeBSD.org diff --git a/biology/viennarna/distinfo b/biology/viennarna/distinfo index eeb985c063c4..a39942444d22 100644 --- a/biology/viennarna/distinfo +++ b/biology/viennarna/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1619228835 -SHA256 (ViennaRNA-2.4.18.tar.gz) = 7caa723f5e5cd61a60aba60b24a64db39817a76244293754b00fe83a1dab609d -SIZE (ViennaRNA-2.4.18.tar.gz) = 39772465 +TIMESTAMP = 1643064934 +SHA256 (ViennaRNA-2.5.0.tar.gz) = b85544650ee316743173ec9b30497cc4c559f1bfb8f66d16c563f780afd8c0c5 +SIZE (ViennaRNA-2.5.0.tar.gz) = 59332268 diff --git a/biology/viennarna/pkg-plist b/biology/viennarna/pkg-plist index 545120ce7098..4bb410abf849 100644 --- a/biology/viennarna/pkg-plist +++ b/biology/viennarna/pkg-plist @@ -27,6 +27,7 @@ bin/RNApvmin bin/RNAsnoop bin/RNAsubopt bin/RNAup +bin/RNAmultifold bin/b2ct bin/ct2db bin/kinwalker @@ -126,6 +127,7 @@ include/ViennaRNA/part_func_co.h include/ViennaRNA/part_func_up.h include/ViennaRNA/part_func_window.h include/ViennaRNA/perturbation_fold.h +include/ViennaRNA/pf_multifold.h include/ViennaRNA/pk_plex.h include/ViennaRNA/plex.h include/ViennaRNA/plot_aln.h @@ -153,6 +155,7 @@ include/ViennaRNA/stringdist.h include/ViennaRNA/structure_utils.h include/ViennaRNA/structured_domains.h include/ViennaRNA/subopt.h +include/ViennaRNA/subopt_zuker.h include/ViennaRNA/svm.h include/ViennaRNA/svm_utils.h include/ViennaRNA/treedist.h @@ -169,6 +172,7 @@ include/ViennaRNA/utils/svm.h include/ViennaRNA/utils/units.h include/ViennaRNA/vrna_config.h include/ViennaRNA/walk.h +include/ViennaRNA/wrap_dlib.h include/ViennaRNA/zscore.h include/g2.h include/g2_FIG.h @@ -197,6 +201,7 @@ man/man1/RNAforester.1.gz man/man1/RNAheat.1.gz man/man1/RNAinverse.1.gz man/man1/RNAlocmin.1.gz +man/man1/RNAmultifold.1.gz man/man1/RNApaln.1.gz man/man1/RNAparconv.1.gz man/man1/RNApdist.1.gz