git: 231919fc1935 - main - biology/vsearch: Update to 2.19.0

The branch main has been updated by jwb:

URL: https://cgit.FreeBSD.org/ports/commit/?id=231919fc1935355a5f7dc5466844c04cb51c6444

commit 231919fc1935355a5f7dc5466844c04cb51c6444
Author:     Jason W. Bacon <jwb@FreeBSD.org>
AuthorDate: 2022-01-08 00:04:02 +0000
Commit:     Jason W. Bacon <jwb@FreeBSD.org>
CommitDate: 2022-01-08 00:04:02 +0000

    biology/vsearch: Update to 2.19.0
    
    A few bug fixes, new subcommands and options
    
    Changes:        https://github.com/torognes/vsearch/tags
    Reporte by:     portscout
---
 biology/vsearch/Makefile                    |  8 ++++----
 biology/vsearch/distinfo                    |  6 +++---
 biology/vsearch/files/patch-configure.ac    | 13 -------------
 biology/vsearch/files/patch-src_Makefile.am | 18 ------------------
 4 files changed, 7 insertions(+), 38 deletions(-)

diff --git a/biology/vsearch/Makefile b/biology/vsearch/Makefile
index 7ebf356c1c06..7a264f379a41 100644
--- a/biology/vsearch/Makefile
+++ b/biology/vsearch/Makefile
@@ -1,7 +1,7 @@
-PORTNAME=	vsearch
+PORTNAME=		vsearch
 DISTVERSIONPREFIX=	v
-DISTVERSION=	2.17.1
-CATEGORIES=	biology
+DISTVERSION=		2.19.0
+CATEGORIES=		biology
 
 MAINTAINER=	jwb@FreeBSD.org
 COMMENT=	Versatile open-source tool for metagenomics
@@ -10,7 +10,7 @@ LICENSE=	GPLv3
 LICENSE_FILE=	${WRKSRC}/LICENSE.txt
 
 ONLY_FOR_ARCHS=		aarch64 amd64 powerpc64le
-ONLY_FOR_ARCHS_REASON=	explicitly enumerated by upstream developers
+ONLY_FOR_ARCHS_REASON=	Explicitly enumerated by upstream developers
 
 LIB_DEPENDS=	libsysinfo.so:devel/libsysinfo
 
diff --git a/biology/vsearch/distinfo b/biology/vsearch/distinfo
index 6fe700db2278..ff23577ebb73 100644
--- a/biology/vsearch/distinfo
+++ b/biology/vsearch/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1623856296
-SHA256 (torognes-vsearch-v2.17.1_GH0.tar.gz) = cee02a1fceb919db8916c6f114926a11166db15d2da79c1c1f680285435d39bc
-SIZE (torognes-vsearch-v2.17.1_GH0.tar.gz) = 249268
+TIMESTAMP = 1641573705
+SHA256 (torognes-vsearch-v2.19.0_GH0.tar.gz) = 74bc30786512d07e49836320af1e745ef527c4472317621d3bd0b50cbc218736
+SIZE (torognes-vsearch-v2.19.0_GH0.tar.gz) = 253686
diff --git a/biology/vsearch/files/patch-configure.ac b/biology/vsearch/files/patch-configure.ac
deleted file mode 100644
index 150d3745c8a2..000000000000
--- a/biology/vsearch/files/patch-configure.ac
+++ /dev/null
@@ -1,13 +0,0 @@
---- configure.ac.orig	2021-01-30 15:11:25 UTC
-+++ configure.ac
-@@ -14,8 +14,8 @@ MACOSX_DEPLOYMENT_TARGET="10.9"
- 
- # Set default gcc and g++ options
- 
--CFLAGS='-g'
--CXXFLAGS='-g -std=c++11'
-+# CFLAGS='-g'
-+# CXXFLAGS='-g -std=c++11'
- 
- # Checks for programs.
- AC_PROG_CXX
diff --git a/biology/vsearch/files/patch-src_Makefile.am b/biology/vsearch/files/patch-src_Makefile.am
deleted file mode 100644
index e54c9a606035..000000000000
--- a/biology/vsearch/files/patch-src_Makefile.am
+++ /dev/null
@@ -1,18 +0,0 @@
---- src/Makefile.am.orig	2019-04-30 11:57:32 UTC
-+++ src/Makefile.am
-@@ -1,12 +1,12 @@
- bin_PROGRAMS = $(top_builddir)/bin/vsearch
- 
- if TARGET_PPC
--AM_CXXFLAGS=-Wall -Wsign-compare -O3 -g -mcpu=power8
-+AM_CXXFLAGS=-Wall -Wsign-compare
- else
- if TARGET_AARCH64
--AM_CXXFLAGS=-Wall -Wsign-compare -O3 -g -march=armv8-a+simd -mtune=generic
-+AM_CXXFLAGS=-Wall -Wsign-compare
- else
--AM_CXXFLAGS=-Wall -Wsign-compare -O3 -g -march=x86-64 -mtune=generic
-+AM_CXXFLAGS=-Wall -Wsign-compare
- endif
- endif
-