From nobody Tue Dec 14 19:45:36 2021 X-Original-To: dev-commits-ports-main@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 316FC18EA73D; Tue, 14 Dec 2021 19:45:40 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4JD84K4TS0z4vlQ; Tue, 14 Dec 2021 19:45:37 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from gitrepo.freebsd.org (gitrepo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:5]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id EBF1764BF; Tue, 14 Dec 2021 19:45:36 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from gitrepo.freebsd.org ([127.0.1.44]) by gitrepo.freebsd.org (8.16.1/8.16.1) with ESMTP id 1BEJjaKV035866; Tue, 14 Dec 2021 19:45:36 GMT (envelope-from git@gitrepo.freebsd.org) Received: (from git@localhost) by gitrepo.freebsd.org (8.16.1/8.16.1/Submit) id 1BEJjakq035865; Tue, 14 Dec 2021 19:45:36 GMT (envelope-from git) Date: Tue, 14 Dec 2021 19:45:36 GMT Message-Id: <202112141945.1BEJjakq035865@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: "Jason W. Bacon" Subject: git: d167ed211d06 - main - biology/ad2vcf: Update to 0.1.4 List-Id: Commits to the main branch of the FreeBSD ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-main List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-dev-commits-ports-main@freebsd.org X-BeenThere: dev-commits-ports-main@freebsd.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: jwb X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: d167ed211d061a3755621789fed9ba3a978d7553 Auto-Submitted: auto-generated ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1639511138; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=mFIg3OJXWu+DgQ/fWqvp2ta1fcskxH3iiXjQ9e5ZuzI=; b=BRvXQ/aclzKPSToU0PIR9uHxfAFX1fbvyYNGf2syZWbiHCR1VVWA7hdRZotpuIH/j3NbBS DcZv5qe+PmOc/j62XpNnghl/VoPdodJ7uE79mOMds1RFZ6lueS1JBQxA5DsJCFVAW6icKx 0p4IUaccSoRslWVqTfl99hscvT/4oHY/uazbywkUJP3xU/Ax1+y4oryDfbIochbZbHHJrn 6+8ZhnCrtYmGGCQlzvcRQrKVOGG3uTirQ0OsLNW+oCDPBGlMrWplbBtTH7v6M54fr+Cl8H VXLw/vnqKLAcYtin6CGn1PjtDwjkmkVc20gz1ey/u55fkwKRTUw9KqCpEYel+Q== ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1639511138; a=rsa-sha256; cv=none; b=JHRaYVUclpRj9nLW2djliOKkyuUb3EyLsaS4v/xd/Uym7UFBDZFKN90vWgcUjtoJL8Uv3S E55T+OE8Uoy7FFsXi6y0nqx4zQSxPeR56/P/OlVN9LjHvk95Ux1BPZI94VdhqwyoLGoyV+ sRwUDj27lR8L0z5N1q9okFATolbV4IdIGJYHSnPcxK/WWyhWVm1nvWuyd/A/01i2GbetgY XmTg/JxrgoVHEjbiVdZRS37nY8eoWSO3Tv6WemtQuGDHBW2rUKCLjBOdj0RUXHy9eUUvMR fR7kZ/3z6b/ZFrIxPgcFgBFtXsJhWFmMyjTJS2CdvXSpkFqyZKmJsAmeRddRSA== ARC-Authentication-Results: i=1; mx1.freebsd.org; none X-ThisMailContainsUnwantedMimeParts: N The branch main has been updated by jwb: URL: https://cgit.FreeBSD.org/ports/commit/?id=d167ed211d061a3755621789fed9ba3a978d7553 commit d167ed211d061a3755621789fed9ba3a978d7553 Author: Jason W. Bacon AuthorDate: 2021-12-14 19:41:11 +0000 Commit: Jason W. Bacon CommitDate: 2021-12-14 19:45:31 +0000 biology/ad2vcf: Update to 0.1.4 Updates for evolving libxtend and biolibc APIs Add --version flag Filter out unused SAM fields on input Numerous other minor fixes and enhancements Changes: https://github.com/auerlab/ad2vcf/releases/tag/0.1.4 --- biology/ad2vcf/Makefile | 4 ++-- biology/ad2vcf/distinfo | 6 +++--- 2 files changed, 5 insertions(+), 5 deletions(-) diff --git a/biology/ad2vcf/Makefile b/biology/ad2vcf/Makefile index 66f6cd76a3c2..f4be564f369d 100644 --- a/biology/ad2vcf/Makefile +++ b/biology/ad2vcf/Makefile @@ -1,6 +1,5 @@ PORTNAME= ad2vcf -DISTVERSION= 0.1.3-31 -DISTVERSIONSUFFIX= -g2073297 +DISTVERSION= 0.1.4 CATEGORIES= biology MAINTAINER= jwb@FreeBSD.org @@ -14,6 +13,7 @@ LIB_DEPENDS= libbiolibc.so:biology/biolibc libxtend.so:devel/libxtend USE_GITHUB= yes GH_ACCOUNT= auerlab +MAKE_ENV+= VERSION=${PORTVERSION} PLIST_FILES= bin/ad2vcf man/man1/ad2vcf.1.gz pre-build: diff --git a/biology/ad2vcf/distinfo b/biology/ad2vcf/distinfo index adc5533df765..4dacb0b9184e 100644 --- a/biology/ad2vcf/distinfo +++ b/biology/ad2vcf/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1628941739 -SHA256 (auerlab-ad2vcf-0.1.3-31-g2073297_GH0.tar.gz) = 5f6b5219d2ea2d92eda8ff2f112a6e2a3cd363b9fa88713a84838e213cb450e3 -SIZE (auerlab-ad2vcf-0.1.3-31-g2073297_GH0.tar.gz) = 15209 +TIMESTAMP = 1639408929 +SHA256 (auerlab-ad2vcf-0.1.4_GH0.tar.gz) = 84c821fc800f77aacd2764399a5dbd4786d3e9a8ebd5993aa93703898456ef9a +SIZE (auerlab-ad2vcf-0.1.4_GH0.tar.gz) = 15964