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ESMTPS id 4X79G82m3zzPvd; Tue, 17 Sep 2024 05:25:04 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from gitrepo.freebsd.org ([127.0.1.44]) by gitrepo.freebsd.org (8.18.1/8.18.1) with ESMTP id 48H5P4Mj089841; Tue, 17 Sep 2024 05:25:04 GMT (envelope-from git@gitrepo.freebsd.org) Received: (from git@localhost) by gitrepo.freebsd.org (8.18.1/8.18.1/Submit) id 48H5P4hn089838; Tue, 17 Sep 2024 05:25:04 GMT (envelope-from git) Date: Tue, 17 Sep 2024 05:25:04 GMT Message-Id: <202409170525.48H5P4hn089838@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: Yuri Victorovich Subject: git: 390d42059282 - main - science/cantera: update 3.0.0 =?utf-8?Q?=E2=86=92?= 3.0.1 List-Id: Commit messages for all branches of the ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-all List-Help: List-Post: List-Subscribe: List-Unsubscribe: X-BeenThere: dev-commits-ports-all@freebsd.org Sender: owner-dev-commits-ports-all@FreeBSD.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: yuri X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: 390d42059282ab33dbd567925dafc1a3567e2f80 Auto-Submitted: auto-generated The branch main has been updated by yuri: URL: https://cgit.FreeBSD.org/ports/commit/?id=390d42059282ab33dbd567925dafc1a3567e2f80 commit 390d42059282ab33dbd567925dafc1a3567e2f80 Author: Yuri Victorovich AuthorDate: 2024-09-17 05:24:45 +0000 Commit: Yuri Victorovich CommitDate: 2024-09-17 05:25:01 +0000 science/cantera: update 3.0.0 → 3.0.1 --- science/cantera/Makefile | 24 ++- science/cantera/distinfo | 6 +- science/cantera/pkg-plist | 442 ++++++++++------------------------------------ 3 files changed, 117 insertions(+), 355 deletions(-) diff --git a/science/cantera/Makefile b/science/cantera/Makefile index e0ede2fc6050..914a8928850c 100644 --- a/science/cantera/Makefile +++ b/science/cantera/Makefile @@ -1,7 +1,6 @@ PORTNAME= cantera DISTVERSIONPREFIX= v -DISTVERSION= 3.0.0 -PORTREVISION= 3 +DISTVERSION= 3.0.1 CATEGORIES= science # chemistry physics MAINTAINER= yuri@FreeBSD.org @@ -20,7 +19,7 @@ LIB_DEPENDS= libfmt.so:devel/libfmt \ libopenblas.so:math/openblas \ libyaml-cpp.so:devel/yaml-cpp -USES= compiler:c++17-lang eigen:3 localbase scons +USES= compiler:c++17-lang eigen:3 gettext-runtime localbase scons USE_LDCONFIG= yes USE_GITHUB= yes @@ -44,7 +43,7 @@ ALL_TARGET= build TEST_TARGET= test # some tests fail, see https://github.com/Cantera/cantera/issues/1095 OPTIONS_DEFINE= OCTAVE PYTHON -OPTIONS_DEFAULT= # PYTHON is broken; OCTAVE is off by default because Octave interface is not a frequently requested feature +OPTIONS_DEFAULT= PYTHON # OCTAVE is off by default because Octave interface is not a frequently requested feature OPTIONS_SUB= yes OCTAVE_DESC= Octave support @@ -60,14 +59,15 @@ PYTHON_USES_OFF= python:env PYTHON_USE= PYTHON=cython PYTHON_MAKE_ARGS= python_cmd=${PYTHON_CMD} python_package=full PYTHON_MAKE_ARGS_OFF= python_package="none" -PYTHON_BUILD_DEPENDS= ${PYNUMPY} +PYTHON_BUILD_DEPENDS= ${PYNUMPY} \ + ${PYTHON_PKGNAMEPREFIX}wheel>0:devel/py-wheel@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}pip>0:devel/py-pip@${PY_FLAVOR} PYTHON_RUN_DEPENDS= ${PYNUMPY} \ ${PYTHON_PKGNAMEPREFIX}h5py>0:science/py-h5py@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}matplotlib>0:math/py-matplotlib@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}pandas>0:math/py-pandas@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}ruamel.yaml>0:devel/py-ruamel.yaml@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}scipy>0:science/py-scipy@${PY_FLAVOR} -PYTHON_BROKEN= https://github.com/Cantera/cantera/issues/1601 do-install: cd ${WRKSRC} && \ @@ -76,8 +76,18 @@ do-install: @${STRIP_CMD} ${STAGEDIR}${PREFIX}/lib/libcantera_shared.so.${PORTVERSION} do-install-PYTHON-on: + # delete .pyc files to fix the stage reference problem, see https://github.com/Cantera/cantera/issues/1601 + @for f in `${FIND} ${STAGEDIR} -name "*.pyc"`; do \ + ${RM} $${f}; \ + done # strip - @${STRIP_CMD} ${STAGEDIR}${PYTHON_SITELIBDIR}/cantera/_cantera.cpython-${PYTHON_SUFFIX}.so + @${STRIP_CMD} \ + ${STAGEDIR}${PYTHON_SITELIBDIR}/cantera/_cantera.cpython-${PYTHON_SUFFIX}.so \ + ${STAGEDIR}${PREFIX}/lib/libcantera_python3_11.so + # remove empty dirs + @${RMDIR} \ + ${STAGEDIR}${PYTHON_SITELIBDIR}/cantera/__pycache__ \ + ${STAGEDIR}${PYTHON_SITELIBDIR}/cantera/with_units/__pycache__ post-patch-OCTAVE-on: # adjust Octave version in SConscript (python styled os.environ['OCTAVE_VERSION'] somehow doesn't work for this) @${REINPLACE_CMD} -e "s|, 'bin', 'glnx.*')|, 'lib', 'octave', '${OCTAVE_VERSION}')|" ${WRKSRC}/src/matlab/SConscript diff --git a/science/cantera/distinfo b/science/cantera/distinfo index 4fa9a5607568..3cf6ea36ed62 100644 --- a/science/cantera/distinfo +++ b/science/cantera/distinfo @@ -1,5 +1,5 @@ -TIMESTAMP = 1692765950 -SHA256 (Cantera-cantera-v3.0.0_GH0.tar.gz) = 6d17cdef21dae9deaf91351260b68ccf7e264c37c6030c9d4bf26a2cefb2b905 -SIZE (Cantera-cantera-v3.0.0_GH0.tar.gz) = 2451103 +TIMESTAMP = 1726538499 +SHA256 (Cantera-cantera-v3.0.1_GH0.tar.gz) = 3c51803c2d776e4cb2fed14d5eb17b2fa78a274d0e54d87eb91f23afe3cc4a8c +SIZE (Cantera-cantera-v3.0.1_GH0.tar.gz) = 2451841 SHA256 (LLNL-sundials-887af43_GH0.tar.gz) = 147919c4887c93157c9975f195e8d45903285b61303d42f9dfdee251468abdb7 SIZE (LLNL-sundials-887af43_GH0.tar.gz) = 18888776 diff --git a/science/cantera/pkg-plist b/science/cantera/pkg-plist index a48fdd351667..05380d4dd123 100644 --- a/science/cantera/pkg-plist +++ b/science/cantera/pkg-plist @@ -1,8 +1,7 @@ -%%PYTHON%%bin/ck2cti %%PYTHON%%bin/ck2yaml %%PYTHON%%bin/cti2yaml %%PYTHON%%bin/ctml2yaml -%%PYTHON%%bin/ctml_writer +%%PYTHON%%bin/yaml2ck include/cantera/base/AnyMap.h include/cantera/base/AnyMap.inl.h include/cantera/base/Array.h @@ -616,383 +615,80 @@ include/cantera/zerodim.h %%OCTAVE%%lib/cantera/matlab/toolbox/polynom.m %%OCTAVE%%lib/cantera/matlab/toolbox/useLegacyRateConstants.m lib/libcantera.a +%%PYTHON%%lib/libcantera_python3_11.so lib/libcantera_shared.so lib/libcantera_shared.so.3 -lib/libcantera_shared.so.3.0.0 -%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-2.6.0a3-py%%PYTHON_VER%%.egg-info/PKG-INFO -%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-2.6.0a3-py%%PYTHON_VER%%.egg-info/SOURCES.txt -%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-2.6.0a3-py%%PYTHON_VER%%.egg-info/dependency_links.txt -%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-2.6.0a3-py%%PYTHON_VER%%.egg-info/entry_points.txt -%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-2.6.0a3-py%%PYTHON_VER%%.egg-info/not-zip-safe -%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-2.6.0a3-py%%PYTHON_VER%%.egg-info/top_level.txt +lib/libcantera_shared.so.3.0.1 +%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-3.0.1.dist-info/INSTALLER +%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-3.0.1.dist-info/LICENSE.txt +%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-3.0.1.dist-info/METADATA +%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-3.0.1.dist-info/RECORD +%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-3.0.1.dist-info/REQUESTED +%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-3.0.1.dist-info/WHEEL +%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-3.0.1.dist-info/direct_url.json +%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-3.0.1.dist-info/entry_points.txt +%%PYTHON%%%%PYTHON_SITELIBDIR%%/Cantera-3.0.1.dist-info/top_level.txt %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/__init__.pxd %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/__init__.py -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/__pycache__/__init__%%PYTHON_EXT_SUFFIX%%.pyc -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/__pycache__/ck2cti%%PYTHON_EXT_SUFFIX%%.pyc -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/__pycache__/ck2yaml%%PYTHON_EXT_SUFFIX%%.pyc -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/__pycache__/composite%%PYTHON_EXT_SUFFIX%%.pyc -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/__pycache__/cti2yaml%%PYTHON_EXT_SUFFIX%%.pyc 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-%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/data/nasa9-test-subset.inp -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/data/nasa9-test-subset.xml -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/data/nasa9-test-therm.dat -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/data/nasa9-test.inp -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/data/nasa9-test.xml -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/data/negative-order.cti -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/data/negative-order.inp -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/data/negative-rate.inp -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/data/noninteger-atomicity.cti -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/data/noxNeg.cti -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/data/noxNeg.xml -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/data/noxNeg.yaml -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/data/pdep-test.cti -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/data/pdep-test.inp -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/data/pdep-test.xml -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/data/pdep-test.yaml -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/data/pdss_hkft.xml -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/data/phase-reaction-spec1.yaml -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/data/phase-reaction-spec2.yaml -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/data/photo-reaction.inp -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/data/photo-reaction.xml -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/data/ptcombust-motzwise.cti -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/data/ptcombust-motzwise.xml -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/data/ptcombust-simple.cti -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/data/reaction-orders.cti -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/data/reaction-orders.xml -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/data/simplephases.yaml -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/data/sofc-test.csv 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-%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/test_composite.py -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/test_convert.py -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/test_equilibrium.py -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/test_func1.py -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/test_kinetics.py -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/test_mixture.py -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/test_onedim.py -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/test_purefluid.py -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/test_reaction.py -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/test_reactor.py -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/test_thermo.py -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/test_transport.py -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/test_utils.py -%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/utilities.py +%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/preconditioners.pxd +%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/reaction.pxd +%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/reactionpath.pxd +%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/reactor.pxd +%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/solutionbase.pxd +%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/speciesthermo.pxd +%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/test/README.txt +%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/thermo.pxd +%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/transport.pxd +%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/units.pxd %%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/utils.py +%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/with_units/__init__.py +%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/with_units/solution.py +%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/yaml2ck.py +%%PYTHON%%%%PYTHON_SITELIBDIR%%/cantera/yamlwriter.pxd libdata/pkgconfig/cantera.pc %%DATADIR%%/data/KOH.yaml %%DATADIR%%/data/SiF4_NH3_mec.yaml @@ -1059,6 +755,62 @@ libdata/pkgconfig/cantera.pc %%DATADIR%%/samples/cxx/rankine/CMakeLists.txt %%DATADIR%%/samples/cxx/rankine/SConstruct %%DATADIR%%/samples/cxx/rankine/rankine.cpp +%%PYTHON%%%%DATADIR%%/samples/python/kinetics/blowers_masel.py +%%PYTHON%%%%DATADIR%%/samples/python/kinetics/custom_reactions.py +%%PYTHON%%%%DATADIR%%/samples/python/kinetics/extract_submechanism.py +%%PYTHON%%%%DATADIR%%/samples/python/kinetics/mechanism_reduction.py +%%PYTHON%%%%DATADIR%%/samples/python/kinetics/reaction_path.py +%%PYTHON%%%%DATADIR%%/samples/python/multiphase/adiabatic.py +%%PYTHON%%%%DATADIR%%/samples/python/multiphase/plasma_equilibrium.py +%%PYTHON%%%%DATADIR%%/samples/python/onedim/adiabatic_flame.py +%%PYTHON%%%%DATADIR%%/samples/python/onedim/burner_flame.py +%%PYTHON%%%%DATADIR%%/samples/python/onedim/diffusion_flame.py +%%PYTHON%%%%DATADIR%%/samples/python/onedim/diffusion_flame_batch.py +%%PYTHON%%%%DATADIR%%/samples/python/onedim/diffusion_flame_extinction.py +%%PYTHON%%%%DATADIR%%/samples/python/onedim/flame_fixed_T.py +%%PYTHON%%%%DATADIR%%/samples/python/onedim/flame_initial_guess.py +%%PYTHON%%%%DATADIR%%/samples/python/onedim/flamespeed_sensitivity.py +%%PYTHON%%%%DATADIR%%/samples/python/onedim/ion_burner_flame.py +%%PYTHON%%%%DATADIR%%/samples/python/onedim/ion_free_flame.py +%%PYTHON%%%%DATADIR%%/samples/python/onedim/premixed_counterflow_flame.py +%%PYTHON%%%%DATADIR%%/samples/python/onedim/premixed_counterflow_twin_flame.py +%%PYTHON%%%%DATADIR%%/samples/python/onedim/stagnation_flame.py +%%PYTHON%%%%DATADIR%%/samples/python/onedim/tdata.dat +%%PYTHON%%%%DATADIR%%/samples/python/reactors/NonIdealShockTube.py +%%PYTHON%%%%DATADIR%%/samples/python/reactors/PorousMediaBurner.py +%%PYTHON%%%%DATADIR%%/samples/python/reactors/combustor.py +%%PYTHON%%%%DATADIR%%/samples/python/reactors/custom.py +%%PYTHON%%%%DATADIR%%/samples/python/reactors/custom2.py +%%PYTHON%%%%DATADIR%%/samples/python/reactors/fuel_injection.py +%%PYTHON%%%%DATADIR%%/samples/python/reactors/ic_engine.py +%%PYTHON%%%%DATADIR%%/samples/python/reactors/mix1.py +%%PYTHON%%%%DATADIR%%/samples/python/reactors/periodic_cstr.py +%%PYTHON%%%%DATADIR%%/samples/python/reactors/pfr.py +%%PYTHON%%%%DATADIR%%/samples/python/reactors/piston.py +%%PYTHON%%%%DATADIR%%/samples/python/reactors/preconditioned_integration.py +%%PYTHON%%%%DATADIR%%/samples/python/reactors/reactor1.py +%%PYTHON%%%%DATADIR%%/samples/python/reactors/reactor2.py +%%PYTHON%%%%DATADIR%%/samples/python/reactors/sensitivity1.py +%%PYTHON%%%%DATADIR%%/samples/python/reactors/surf_pfr.py +%%PYTHON%%%%DATADIR%%/samples/python/reactors/surf_pfr_chain.py +%%PYTHON%%%%DATADIR%%/samples/python/surface_chemistry/1D_pfr_surfchem.py +%%PYTHON%%%%DATADIR%%/samples/python/surface_chemistry/catalytic_combustion.py +%%PYTHON%%%%DATADIR%%/samples/python/surface_chemistry/diamond_cvd.py +%%PYTHON%%%%DATADIR%%/samples/python/surface_chemistry/lithium_ion_battery.py +%%PYTHON%%%%DATADIR%%/samples/python/surface_chemistry/sofc.py +%%PYTHON%%%%DATADIR%%/samples/python/thermo/coverage_dependent_surf.py +%%PYTHON%%%%DATADIR%%/samples/python/thermo/critical_properties.py +%%PYTHON%%%%DATADIR%%/samples/python/thermo/equivalenceRatio.py +%%PYTHON%%%%DATADIR%%/samples/python/thermo/isentropic.py +%%PYTHON%%%%DATADIR%%/samples/python/thermo/isentropic_units.py +%%PYTHON%%%%DATADIR%%/samples/python/thermo/mixing.py +%%PYTHON%%%%DATADIR%%/samples/python/thermo/rankine.py +%%PYTHON%%%%DATADIR%%/samples/python/thermo/rankine_units.py +%%PYTHON%%%%DATADIR%%/samples/python/thermo/sound_speed.py +%%PYTHON%%%%DATADIR%%/samples/python/thermo/sound_speed_units.py +%%PYTHON%%%%DATADIR%%/samples/python/thermo/vapordome.py +%%PYTHON%%%%DATADIR%%/samples/python/transport/dusty_gas.py +%%PYTHON%%%%DATADIR%%/samples/python/transport/multiprocessing_viscosity.py %%OCTAVE%%%%DATADIR%%/samples/matlab/PFR_solver.m %%OCTAVE%%%%DATADIR%%/samples/matlab/Plug_Flow_Reactor.m %%OCTAVE%%%%DATADIR%%/samples/matlab/catcomb.m