From nobody Sat Nov 16 10:27:27 2024 X-Original-To: dev-commits-ports-all@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4Xr97M4H8Qz5d8NX; Sat, 16 Nov 2024 10:27:27 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R10" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4Xr97M35Lnz4vds; Sat, 16 Nov 2024 10:27:27 +0000 (UTC) (envelope-from git@FreeBSD.org) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1731752847; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=/oEfEQ4p1kX/ayJWF34isez4QAS5ssOkaSsjWnfowgs=; b=xzH7kjp7SnjmgsYSm3kCOJgX96bJxQACoVOGMbJpKvjrpPX9g2jiOLo/daLorIAIzPfHMn HN9gAustSBP4Lan4C7+h4cGwLB5QeSRkHoRb8m8eE0NBcokMQTQ8H25wEUM5RtAWcMHfNF S3y7KJcgz1X93lDNF/xt6ziqPYX5DzVuK8Hc1DSK9F0++Cn0YHgkBbD4fFZgAZGC4JJ4WB QydfF/GJ54AL8RysFbC3TUFLVqpiLu4D/SUqazZrOB5DCoEdtbpPxr5EPMLeS8wJJx1PAz azbU/gB88lT2dhSNVq0xicq/4jyhd/fPDdj7K7Lk3omiF2PY7/eptwDe742MVA== ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1731752847; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=/oEfEQ4p1kX/ayJWF34isez4QAS5ssOkaSsjWnfowgs=; b=BvReoBPipqd3uCQQrBCO7lxmswc54HpshVty7iEtxOpCaxi46nxMXCL6Qydqhdow3yvgx6 ChemHK9RSw3FxcV1Q4mvJgahruF0aPr99naZpAEAXn2h5g6amnYmwNNfzb1OtFkLNxVbPJ 3p9J+pv541h6U+Usr8+zcbZtgPK2Uy1Z+XLnGm7nVj7Z0mLYVFo+RYG0BDmrXG+uj9spbv 3tHumpl0UBvi2MgbiNrZH0RQ1HY072lfMVMuwPShHaCWPX06FvYSoQv8Y+rnKQmXOREZHw qSBNGwaZ+8M1vc4Q0UJmworXeDj7xN9lLjE1XpWB8JyoBodOsWjMsemXwFCuGQ== ARC-Authentication-Results: i=1; mx1.freebsd.org; none ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1731752847; a=rsa-sha256; cv=none; b=erO3fdVEPiDbQ3PW59ZJZQsrKNo6AT9h3HXmeWOudtw6gxgxnLke0YMj6FUC9LXhEAUl7Q sYoshn1dGI1I0eoqkoiZxkJ8rXT+7kPqciLYvewTOZpWbatswuONca+FXg9BVE2r+jvhaA +i47XoDjP6g2wNZ0gdKeZ9cFRHZSDOnzLztrW8yEC/nKc3QemioLnNGAh89FkYOtvX2Cn6 Ty/ylsLpfADV2LjWIrg89E01/43hbaQo96XpsUnjtiyJPVsq9MfZ4CAL+i9QEsyyPsv9Af SEnOQ8ObUA6cvHauYR4aig9LKdhiZJgUXXtaPq3l2Gr78Fa1SodAfH4ePIibmA== Received: from gitrepo.freebsd.org (gitrepo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:5]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 4Xr97M2SMVz13MR; Sat, 16 Nov 2024 10:27:27 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from gitrepo.freebsd.org ([127.0.1.44]) by gitrepo.freebsd.org (8.18.1/8.18.1) with ESMTP id 4AGARROe053642; Sat, 16 Nov 2024 10:27:27 GMT (envelope-from git@gitrepo.freebsd.org) Received: (from git@localhost) by gitrepo.freebsd.org (8.18.1/8.18.1/Submit) id 4AGARR7P053639; Sat, 16 Nov 2024 10:27:27 GMT (envelope-from git) Date: Sat, 16 Nov 2024 10:27:27 GMT Message-Id: <202411161027.4AGARR7P053639@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: Yuri Victorovich Subject: git: f46e45c34456 - main - biology/py-gtfparse: update 1.3.0 =?utf-8?Q?=E2=86=92?= 2.5.0 List-Id: Commit messages for all branches of the ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-all List-Help: List-Post: List-Subscribe: List-Unsubscribe: X-BeenThere: dev-commits-ports-all@freebsd.org Sender: owner-dev-commits-ports-all@FreeBSD.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: yuri X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: f46e45c344564ac98a004decdee000fc737427b4 Auto-Submitted: auto-generated The branch main has been updated by yuri: URL: https://cgit.FreeBSD.org/ports/commit/?id=f46e45c344564ac98a004decdee000fc737427b4 commit f46e45c344564ac98a004decdee000fc737427b4 Author: Yuri Victorovich AuthorDate: 2024-11-16 07:41:57 +0000 Commit: Yuri Victorovich CommitDate: 2024-11-16 10:27:19 +0000 biology/py-gtfparse: update 1.3.0 → 2.5.0 --- biology/py-gtfparse/Makefile | 13 +++++++------ biology/py-gtfparse/distinfo | 6 +++--- 2 files changed, 10 insertions(+), 9 deletions(-) diff --git a/biology/py-gtfparse/Makefile b/biology/py-gtfparse/Makefile index 114fb6017c25..b2bb5e43548a 100644 --- a/biology/py-gtfparse/Makefile +++ b/biology/py-gtfparse/Makefile @@ -1,8 +1,7 @@ PORTNAME= gtfparse -DISTVERSION= 1.3.0 -PORTREVISION= 1 +DISTVERSION= 2.5.0 CATEGORIES= biology python -MASTER_SITES= PYPI +#MASTER_SITES= PYPI PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org @@ -11,11 +10,13 @@ WWW= https://github.com/openvax/gtfparse LICENSE= APACHE20 -RUN_DEPENDS= ${PYNUMPY} \ - ${PYTHON_PKGNAMEPREFIX}pandas>=0.15:math/py-pandas@${PY_FLAVOR} +BUILD_DEPENDS= ${PY_SETUPTOOLS} +RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pandas>0:math/py-pandas@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}polars>=0.20.2:misc/py-polars@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}pyarrow>=14.0.2:databases/py-pyarrow@${PY_FLAVOR} USES= python -USE_PYTHON= distutils autoplist +USE_PYTHON= pep517 autoplist pytest # tests from the PYPI tarball fail because 'data' module is missing, and the GH repository doesn't have tags NO_ARCH= yes diff --git a/biology/py-gtfparse/distinfo b/biology/py-gtfparse/distinfo index c475bd4a83f1..cf2b7fe4fe20 100644 --- a/biology/py-gtfparse/distinfo +++ b/biology/py-gtfparse/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1678604725 -SHA256 (gtfparse-1.3.0.tar.gz) = d957f18e5f70413f89a28ef83068c461b6407eb38fd30e99b8da3d69143527b1 -SIZE (gtfparse-1.3.0.tar.gz) = 16740 +TIMESTAMP = 1731429071 +SHA256 (gtfparse-2.5.0.tar.gz) = 9fea54811cd87f597a110a49dc1b1b6a3325ffb7d1f36ecc62c32d14d3eb9493 +SIZE (gtfparse-2.5.0.tar.gz) = 17228