From nobody Sat Jul 20 08:37:00 2024 X-Original-To: dev-commits-ports-all@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4WR0Js0rJYz5RFJ0; Sat, 20 Jul 2024 08:37:01 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R11" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4WR0Jr5S5Bz4dgR; Sat, 20 Jul 2024 08:37:00 +0000 (UTC) (envelope-from git@FreeBSD.org) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1721464620; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=AGDfEIptYogXWWf+dWlNHFoOSAP+F3YTyBjbGBZ/qVI=; b=yKAe55zkHXiXKBxq1L2Q+Fm3vODyTnLA5mVcScIoHhbFysmjZ5V37qbWidMf2netOsDzgi 5u1EDg7JFx9DUIn70KJ+RxZsCYklkpNKbcXsWkE6usd1obL91RirslhSBcfS263ZJrBNY4 XloOgm83NlPxxRm6hMJxuMeCeH6/DJifdMswRQmDowGokur3pYmUMDvSjAJ0stOaH56uOJ LYubRmpHq3LCBMVSxlyCGddpL0vPJv1fGVay6n3o2xyX3tq8wseSjCpXEJIDkrKr/fSNx6 djFbF80KnGN777vstKebKx5H2LAmiweAXXh6SRgYPVLf+d/z+8fnhR/JLwtT0A== ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1721464620; a=rsa-sha256; cv=none; b=GHW90wvmuVcjMuEt0j+BQxLeAzA1Fh/CHKbzVw63TswHE8lsIovUumYPAk9NXj3sUegzfM kkAF4kun3Gae5HnGVPSmbeaYThoX+k1U66K2NWGengDYzt6x9gggvaMZ6gUjAdLO1081f+ Ewuqnmk+gnMrcAfdDbBp0LGxUdGEsuxTCxkqVHeURwJHGezu4E0CIYoQgWmzuRANj600AE o2gtSCMcI/9jnQnZ7pVbWizA5cXM2Kpn/t5MXDvz4/E82oxZn/VVQBorFYELcMlrdveD+P hcoT4lXZ1CDnvnULIU3vXeaUGfG8YdN7w1wH+z/1yGATV0qPajn2plrlaPu1ng== ARC-Authentication-Results: i=1; mx1.freebsd.org; none ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1721464620; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=AGDfEIptYogXWWf+dWlNHFoOSAP+F3YTyBjbGBZ/qVI=; b=CDWDwiigbgKld++jZzqUJL2lAoIhe+rdx6L6UQZBoBhnWXEku+o0s2vZzn/uZwKj1W0iTV 5LTyLdddjPCvl3uKPgJ7rkeThd6n/Dkm51rBUPTewxRU9LafdJk7IjIC3VMamKl5LXoDlL dDyYimcTH5HkrjvJFVybLIRt5r+cuhVL8hmhqS5P5zJ5DA0YDI5iAEF414UmoYkQX/yyvO vvUK8TA+fVHIiiP8KqRACrHPjwk4aOfU9ccyHYvieP2COlZLXRjzRxMB7ZhiF8BqnbVniE 0qly8xLFdOdp5RILEo8l3MuJEPpLagkwPOsGrHmOTgomNgn0RQIxzYRJOicevQ== Received: from gitrepo.freebsd.org (gitrepo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:5]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 4WR0Jr4kcDz17k9; Sat, 20 Jul 2024 08:37:00 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from gitrepo.freebsd.org ([127.0.1.44]) by gitrepo.freebsd.org (8.18.1/8.18.1) with ESMTP id 46K8b0dQ001624; Sat, 20 Jul 2024 08:37:00 GMT (envelope-from git@gitrepo.freebsd.org) Received: (from git@localhost) by gitrepo.freebsd.org (8.18.1/8.18.1/Submit) id 46K8b0gP001621; Sat, 20 Jul 2024 08:37:00 GMT (envelope-from git) Date: Sat, 20 Jul 2024 08:37:00 GMT Message-Id: <202407200837.46K8b0gP001621@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: Yuri Victorovich Subject: git: 9e9db724e292 - main - biology/gatk: Fix fetch List-Id: Commit messages for all branches of the ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-all List-Help: List-Post: List-Subscribe: List-Unsubscribe: X-BeenThere: dev-commits-ports-all@freebsd.org Sender: owner-dev-commits-ports-all@FreeBSD.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: yuri X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: 9e9db724e2928ce33ae96e2517ae73fa1d119ada Auto-Submitted: auto-generated The branch main has been updated by yuri: URL: https://cgit.FreeBSD.org/ports/commit/?id=9e9db724e2928ce33ae96e2517ae73fa1d119ada commit 9e9db724e2928ce33ae96e2517ae73fa1d119ada Author: Yuri Victorovich AuthorDate: 2024-07-20 08:27:30 +0000 Commit: Yuri Victorovich CommitDate: 2024-07-20 08:36:53 +0000 biology/gatk: Fix fetch --- biology/gatk/Makefile | 2 +- biology/gatk/distinfo | 6 +++--- 2 files changed, 4 insertions(+), 4 deletions(-) diff --git a/biology/gatk/Makefile b/biology/gatk/Makefile index 7c0a4a9e3019..1200e614cba3 100644 --- a/biology/gatk/Makefile +++ b/biology/gatk/Makefile @@ -70,7 +70,7 @@ do-fetch: ) && \ ${FIND} ${PORTNAME}-${DISTVERSION} -and -exec ${TOUCH} -h -d 1970-01-01T00:00:00Z {} \; && \ ${FIND} ${PORTNAME}-${DISTVERSION} -print0 | LC_ALL=C ${SORT} -z | \ - ${TAR} czf ${DISTNAME}${EXTRACT_SUFX} --gid 0 --uid 0 --options gzip:!timestamp --no-recursion --null -T - && \ + ${SETENV} -i ${TAR} czf ${DISTNAME}${EXTRACT_SUFX} --format=cpio --gid 0 --uid 0 --options gzip:!timestamp --no-recursion --null -T - && \ ${RM} -r ${PORTNAME}-${DISTVERSION}; \ fi # fetch the deps distfile diff --git a/biology/gatk/distinfo b/biology/gatk/distinfo index 0dd6a1818b5b..f56c15a9371a 100644 --- a/biology/gatk/distinfo +++ b/biology/gatk/distinfo @@ -1,5 +1,5 @@ -TIMESTAMP = 1720732636 +TIMESTAMP = 1721460609 SHA256 (gatk-4.6.0.0-deps.tar.gz) = 0d124af0ec3d2d93cf2d9c5119ddab4c7d02c8d0213d288695718a6e04064e24 SIZE (gatk-4.6.0.0-deps.tar.gz) = 937753829 -SHA256 (broadinstitute-gatk-4.6.0.0_GH0.tar.gz) = 6805e831d318964787adfeddbbe8b5ce9a916104913b7e1f73d1e08095638c64 -SIZE (broadinstitute-gatk-4.6.0.0_GH0.tar.gz) = 4322587766 +SHA256 (broadinstitute-gatk-4.6.0.0_GH0.tar.gz) = e19eb3efa6d891bdb9c9e11b366fcea73d9a24b1cb74e68ac214d6272730cb50 +SIZE (broadinstitute-gatk-4.6.0.0_GH0.tar.gz) = 4322396590