git: 03ea0f3a11dc - main - math/deal.ii: update 9.5.2 → 9.6.1

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From: Yuri Victorovich <yuri_at_FreeBSD.org>
Date: Sat, 21 Dec 2024 03:41:15 UTC
The branch main has been updated by yuri:

URL: https://cgit.FreeBSD.org/ports/commit/?id=03ea0f3a11dc44b6cd42efda9240fac37b99809d

commit 03ea0f3a11dc44b6cd42efda9240fac37b99809d
Author:     Yuri Victorovich <yuri@FreeBSD.org>
AuthorDate: 2024-12-21 01:20:01 +0000
Commit:     Yuri Victorovich <yuri@FreeBSD.org>
CommitDate: 2024-12-21 03:41:13 +0000

    math/deal.ii: update 9.5.2 → 9.6.1
---
 math/deal.ii/Makefile                              | 18 +++++---
 math/deal.ii/distinfo                              |  6 +--
 ...h-cmake_modules_FindDEAL__II__OPENCASCADE.cmake | 27 ------------
 math/deal.ii/pkg-plist                             | 48 ++++++++++++++++++----
 math/hyperdeal/Makefile                            |  1 +
 5 files changed, 55 insertions(+), 45 deletions(-)

diff --git a/math/deal.ii/Makefile b/math/deal.ii/Makefile
index 3e45251654de..a76b0fec4879 100644
--- a/math/deal.ii/Makefile
+++ b/math/deal.ii/Makefile
@@ -1,16 +1,18 @@
 PORTNAME=	deal.II
-DISTVERSION=	9.5.2
-PORTREVISION=	4
+DISTVERSION=	9.6.1
 CATEGORIES=	math
 MASTER_SITES=	https://github.com/dealii/dealii/releases/download/v${DISTVERSION}/
 DISTNAME=	dealii-${DISTVERSION}
 
 MAINTAINER=	yuri@FreeBSD.org
 COMMENT=	Finite element Differential Equations Analysis Library (DEAL)
-WWW=		https://www.dealii.org/
+WWW=		https://www.dealii.org/ \
+		https://github.com/dealii/dealii
 
-LICENSE=	LGPL21
-LICENSE_FILE=	${WRKSRC}/LICENSE.md
+LICENSE=	APACHE20 LGPL21
+LICENSE_COMB=	dual
+LICENSE_FILE_APACHE20=	${WRKSRC}/LICENSE.md
+LICENSE_FILE_LGPL21=	${WRKSRC}/LICENSE.md
 
 BROKEN_aarch64=		error: use of undeclared identifier '__TBB_machine_fetchadd4'
 BROKEN_armv7=		clang runs out of memory
@@ -19,7 +21,8 @@ BUILD_DEPENDS=	${LOCALBASE}/include/boost/config.hpp:devel/boost-libs
 LIB_DEPENDS=	libblis.so:math/blis \
 		libboost_serialization.so:devel/boost-libs \
 		libhdf5.so:science/hdf5 \
-		libmetis.so:math/metis
+		libmetis.so:math/metis \
+		libvtkCommonCore-${VTK_VER}.so:math/vtk${VTK_VER:R}
 #		libkokkoscore.so:devel/kokkos TMP commented out for bundled kokkos, tests fail for non-bundled kokkos, see https://github.com/dealii/dealii/issues/15692
 
 USES=		blaslapack cmake:testing compiler:c++17-lang localbase:ldflags xorg
@@ -102,4 +105,7 @@ post-patch: # unbundle boost
 post-stage:
 	@${RM} ${STAGEDIR}${PREFIX}/*.log
 
+# the testsuite is excluded from the tarball: https://github.com/dealii/dealii/issues/17951
+
+.include <../../math/vtk9/Makefile.version>
 .include <bsd.port.mk>
diff --git a/math/deal.ii/distinfo b/math/deal.ii/distinfo
index c4822c3aea3e..2bfd96948847 100644
--- a/math/deal.ii/distinfo
+++ b/math/deal.ii/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1709202081
-SHA256 (dealii-9.5.2.tar.gz) = 7930e5218a9807d60cc05c300a3b70f36f4af22c3551a2cd1141fbab013bbaf1
-SIZE (dealii-9.5.2.tar.gz) = 31523493
+TIMESTAMP = 1734736517
+SHA256 (dealii-9.6.1.tar.gz) = 9fcaa3968ac2eab41573b3614756a898a3ea91afcd9f3477ab2f30bb19aa669a
+SIZE (dealii-9.6.1.tar.gz) = 40825345
diff --git a/math/deal.ii/files/patch-cmake_modules_FindDEAL__II__OPENCASCADE.cmake b/math/deal.ii/files/patch-cmake_modules_FindDEAL__II__OPENCASCADE.cmake
deleted file mode 100644
index e723a7b09742..000000000000
--- a/math/deal.ii/files/patch-cmake_modules_FindDEAL__II__OPENCASCADE.cmake
+++ /dev/null
@@ -1,27 +0,0 @@
---- cmake/modules/FindDEAL_II_OPENCASCADE.cmake.orig	2024-02-01 02:26:09 UTC
-+++ cmake/modules/FindDEAL_II_OPENCASCADE.cmake
-@@ -67,11 +67,19 @@ endif()
- endif()
- 
- # These seem to be pretty much the only required ones.
--set(_opencascade_libraries
--  TKBO TKBool TKBRep TKernel TKFeat TKFillet TKG2d TKG3d TKGeomAlgo
--  TKGeomBase TKHLR TKIGES TKMath TKMesh TKOffset TKPrim TKShHealing TKSTEP
--  TKSTEPAttr TKSTEPBase TKSTEP209 TKSTL TKTopAlgo TKXSBase
--  )
-+if(OPENCASCADE_VERSION AND OPENCASCADE_VERSION VERSION_GREATER_EQUAL "7.8.0")
-+  set(_opencascade_libraries
-+    TKBO TKBool TKBRep TKernel TKFeat TKFillet TKG2d TKG3d TKGeomAlgo
-+    TKGeomBase TKHLR TKDEIGES TKMath TKMesh TKOffset TKPrim TKShHealing TKDESTEP
-+    TKDESTL TKTopAlgo TKXSBase
-+    )
-+    else()
-+  set(_opencascade_libraries
-+    TKBO TKBool TKBRep TKernel TKFeat TKFillet TKG2d TKG3d TKGeomAlgo
-+    TKGeomBase TKHLR TKIGES TKMath TKMesh TKOffset TKPrim TKShHealing TKSTEP
-+    TKSTEPAttr TKSTEPBase TKSTEP209 TKSTL TKTopAlgo TKXSBase
-+    )
-+endif()
- 
- set(_libraries "")
- foreach(_library ${_opencascade_libraries})
diff --git a/math/deal.ii/pkg-plist b/math/deal.ii/pkg-plist
index 0f58a55e4363..dfdccf88b979 100644
--- a/math/deal.ii/pkg-plist
+++ b/math/deal.ii/pkg-plist
@@ -35,7 +35,6 @@ include/deal.II/base/function.templates.h
 include/deal.II/base/function_bessel.h
 include/deal.II/base/function_cspline.h
 include/deal.II/base/function_derivative.h
-include/deal.II/base/function_level_set.h
 include/deal.II/base/function_lib.h
 include/deal.II/base/function_parser.h
 include/deal.II/base/function_restriction.h
@@ -50,9 +49,11 @@ include/deal.II/base/graph_coloring.h
 include/deal.II/base/hdf5.h
 include/deal.II/base/incremental_function.h
 include/deal.II/base/index_set.h
+include/deal.II/base/init_finalize.h
 include/deal.II/base/iterator_range.h
 include/deal.II/base/job_identifier.h
 include/deal.II/base/kokkos.h
+include/deal.II/base/lazy.h
 include/deal.II/base/linear_index_iterator.h
 include/deal.II/base/logstream.h
 include/deal.II/base/memory_consumption.h
@@ -116,14 +117,12 @@ include/deal.II/base/scalar_polynomials_base.h
 include/deal.II/base/scope_exit.h
 include/deal.II/base/signaling_nan.h
 include/deal.II/base/smartpointer.h
-include/deal.II/base/std_cxx14/algorithm.h
-include/deal.II/base/std_cxx14/memory.h
-include/deal.II/base/std_cxx14/utility.h
 include/deal.II/base/std_cxx17/algorithm.h
 include/deal.II/base/std_cxx17/cmath.h
 include/deal.II/base/std_cxx17/optional.h
 include/deal.II/base/std_cxx17/tuple.h
 include/deal.II/base/std_cxx17/variant.h
+include/deal.II/base/std_cxx20/functional.h
 include/deal.II/base/std_cxx20/iota_view.h
 include/deal.II/base/std_cxx20/type_traits.h
 include/deal.II/base/subscriptor.h
@@ -135,6 +134,7 @@ include/deal.II/base/synchronous_iterator.h
 include/deal.II/base/table.h
 include/deal.II/base/table_handler.h
 include/deal.II/base/table_indices.h
+include/deal.II/base/task_result.h
 include/deal.II/base/template_constraints.h
 include/deal.II/base/tensor.h
 include/deal.II/base/tensor_accessors.h
@@ -311,6 +311,7 @@ include/deal.II/bundled/OpenMPTarget/Kokkos_OpenMPTarget_Parallel.hpp
 include/deal.II/bundled/OpenMPTarget/Kokkos_OpenMPTarget_Parallel_MDRange.hpp
 include/deal.II/bundled/OpenMPTarget/Kokkos_OpenMPTarget_Task.hpp
 include/deal.II/bundled/OpenMPTarget/Kokkos_OpenMPTarget_UniqueToken.hpp
+include/deal.II/bundled/README.md
 include/deal.II/bundled/SYCL/Kokkos_SYCL_Abort.hpp
 include/deal.II/bundled/SYCL/Kokkos_SYCL_DeepCopy.hpp
 include/deal.II/bundled/SYCL/Kokkos_SYCL_Half_Conversion.hpp
@@ -778,6 +779,7 @@ include/deal.II/fe/fe_base.h
 include/deal.II/fe/fe_bdm.h
 include/deal.II/fe/fe_bernardi_raugel.h
 include/deal.II/fe/fe_bernstein.h
+include/deal.II/fe/fe_coupling_values.h
 include/deal.II/fe/fe_data.h
 include/deal.II/fe/fe_dg_vector.h
 include/deal.II/fe/fe_dg_vector.templates.h
@@ -787,6 +789,7 @@ include/deal.II/fe/fe_dgp_nonparametric.h
 include/deal.II/fe/fe_dgq.h
 include/deal.II/fe/fe_enriched.h
 include/deal.II/fe/fe_face.h
+include/deal.II/fe/fe_hermite.h
 include/deal.II/fe/fe_interface_values.h
 include/deal.II/fe/fe_nedelec.h
 include/deal.II/fe/fe_nedelec_sz.h
@@ -818,7 +821,10 @@ include/deal.II/fe/fe_tools_interpolate.templates.h
 include/deal.II/fe/fe_trace.h
 include/deal.II/fe/fe_update_flags.h
 include/deal.II/fe/fe_values.h
+include/deal.II/fe/fe_values_base.h
 include/deal.II/fe/fe_values_extractors.h
+include/deal.II/fe/fe_values_views.h
+include/deal.II/fe/fe_values_views_internal.h
 include/deal.II/fe/fe_wedge_p.h
 include/deal.II/fe/mapping.h
 include/deal.II/fe/mapping_c1.h
@@ -837,6 +843,7 @@ include/deal.II/fe/mapping_related_data.h
 include/deal.II/gmsh/utilities.h
 include/deal.II/grid/cell_id.h
 include/deal.II/grid/cell_id_translator.h
+include/deal.II/grid/cell_status.h
 include/deal.II/grid/composition_manifold.h
 include/deal.II/grid/connectivity.h
 include/deal.II/grid/filtered_iterator.h
@@ -844,10 +851,11 @@ include/deal.II/grid/grid_generator.h
 include/deal.II/grid/grid_in.h
 include/deal.II/grid/grid_out.h
 include/deal.II/grid/grid_refinement.h
-include/deal.II/grid/grid_reordering.h
 include/deal.II/grid/grid_tools.h
 include/deal.II/grid/grid_tools_cache.h
 include/deal.II/grid/grid_tools_cache_update_flags.h
+include/deal.II/grid/grid_tools_geometry.h
+include/deal.II/grid/grid_tools_topology.h
 include/deal.II/grid/intergrid_map.h
 include/deal.II/grid/magic_numbers.h
 include/deal.II/grid/manifold.h
@@ -867,6 +875,7 @@ include/deal.II/grid/tria_iterator_selector.h
 include/deal.II/grid/tria_levels.h
 include/deal.II/grid/tria_objects.h
 include/deal.II/grid/tria_objects_orientations.h
+include/deal.II/grid/tria_orientation.h
 include/deal.II/hp/collection.h
 include/deal.II/hp/fe_collection.h
 include/deal.II/hp/fe_values.h
@@ -900,7 +909,6 @@ include/deal.II/lac/block_vector_base.h
 include/deal.II/lac/chunk_sparse_matrix.h
 include/deal.II/lac/chunk_sparse_matrix.templates.h
 include/deal.II/lac/chunk_sparsity_pattern.h
-include/deal.II/lac/communication_pattern_base.h
 include/deal.II/lac/constrained_linear_operator.h
 include/deal.II/lac/constraint_matrix.h
 include/deal.II/lac/cuda_atomic.h
@@ -924,8 +932,6 @@ include/deal.II/lac/la_parallel_block_vector.h
 include/deal.II/lac/la_parallel_block_vector.templates.h
 include/deal.II/lac/la_parallel_vector.h
 include/deal.II/lac/la_parallel_vector.templates.h
-include/deal.II/lac/la_vector.h
-include/deal.II/lac/la_vector.templates.h
 include/deal.II/lac/lapack_full_matrix.h
 include/deal.II/lac/lapack_support.h
 include/deal.II/lac/lapack_templates.h
@@ -963,6 +969,7 @@ include/deal.II/lac/precondition_block.templates.h
 include/deal.II/lac/precondition_block_base.h
 include/deal.II/lac/precondition_selector.h
 include/deal.II/lac/qr.h
+include/deal.II/lac/read_vector.h
 include/deal.II/lac/read_write_vector.h
 include/deal.II/lac/read_write_vector.templates.h
 include/deal.II/lac/relaxation_block.h
@@ -1014,7 +1021,19 @@ include/deal.II/lac/trilinos_precondition.h
 include/deal.II/lac/trilinos_solver.h
 include/deal.II/lac/trilinos_sparse_matrix.h
 include/deal.II/lac/trilinos_sparsity_pattern.h
+include/deal.II/lac/trilinos_tpetra_block_sparse_matrix.h
+include/deal.II/lac/trilinos_tpetra_block_sparse_matrix.templates.h
+include/deal.II/lac/trilinos_tpetra_block_vector.h
+include/deal.II/lac/trilinos_tpetra_block_vector.templates.h
 include/deal.II/lac/trilinos_tpetra_communication_pattern.h
+include/deal.II/lac/trilinos_tpetra_precondition.h
+include/deal.II/lac/trilinos_tpetra_precondition.templates.h
+include/deal.II/lac/trilinos_tpetra_solver_direct.h
+include/deal.II/lac/trilinos_tpetra_solver_direct.templates.h
+include/deal.II/lac/trilinos_tpetra_sparse_matrix.h
+include/deal.II/lac/trilinos_tpetra_sparse_matrix.templates.h
+include/deal.II/lac/trilinos_tpetra_sparsity_pattern.h
+include/deal.II/lac/trilinos_tpetra_types.h
 include/deal.II/lac/trilinos_tpetra_vector.h
 include/deal.II/lac/trilinos_tpetra_vector.templates.h
 include/deal.II/lac/trilinos_vector.h
@@ -1038,6 +1057,7 @@ include/deal.II/matrix_free/dof_info.h
 include/deal.II/matrix_free/dof_info.templates.h
 include/deal.II/matrix_free/evaluation_flags.h
 include/deal.II/matrix_free/evaluation_kernels.h
+include/deal.II/matrix_free/evaluation_kernels_face.h
 include/deal.II/matrix_free/evaluation_kernels_hanging_nodes.h
 include/deal.II/matrix_free/evaluation_selector.h
 include/deal.II/matrix_free/evaluation_template_face_factory.templates.h
@@ -1050,6 +1070,7 @@ include/deal.II/matrix_free/face_setup_internal.h
 include/deal.II/matrix_free/fe_evaluation.h
 include/deal.II/matrix_free/fe_evaluation_data.h
 include/deal.II/matrix_free/fe_point_evaluation.h
+include/deal.II/matrix_free/fe_remote_evaluation.h
 include/deal.II/matrix_free/hanging_nodes_internal.h
 include/deal.II/matrix_free/mapping_data_on_the_fly.h
 include/deal.II/matrix_free/mapping_info.h
@@ -1059,10 +1080,16 @@ include/deal.II/matrix_free/mapping_info_storage.templates.h
 include/deal.II/matrix_free/matrix_free.h
 include/deal.II/matrix_free/matrix_free.templates.h
 include/deal.II/matrix_free/operators.h
+include/deal.II/matrix_free/portable_fe_evaluation.h
+include/deal.II/matrix_free/portable_hanging_nodes_internal.h
+include/deal.II/matrix_free/portable_matrix_free.h
+include/deal.II/matrix_free/portable_matrix_free.templates.h
+include/deal.II/matrix_free/portable_tensor_product_kernels.h
 include/deal.II/matrix_free/shape_info.h
 include/deal.II/matrix_free/shape_info.templates.h
 include/deal.II/matrix_free/task_info.h
 include/deal.II/matrix_free/tensor_product_kernels.h
+include/deal.II/matrix_free/tensor_product_point_kernels.h
 include/deal.II/matrix_free/tools.h
 include/deal.II/matrix_free/type_traits.h
 include/deal.II/matrix_free/util.h
@@ -1192,16 +1219,19 @@ include/deal.II/sundials/ida.h
 include/deal.II/sundials/kinsol.h
 include/deal.II/sundials/n_vector.h
 include/deal.II/sundials/n_vector.templates.h
+include/deal.II/sundials/sundials_types.h
 include/deal.II/sundials/sunlinsol_wrapper.h
 include/deal.II/sundials/utilities.h
 include/deal.II/trilinos/nox.h
 include/deal.II/trilinos/nox.templates.h
+include/deal.II/vtk/utilities.h
 lib/cmake/deal.II/deal.IIConfig.cmake
+lib/cmake/deal.II/deal.IIConfigGit.cmake
 lib/cmake/deal.II/deal.IIConfigVersion.cmake
 lib/cmake/deal.II/deal.IITargets-%%CMAKE_BUILD_TYPE%%.cmake
 lib/cmake/deal.II/deal.IITargets.cmake
 lib/libdeal_II.so
-lib/libdeal_II.so.9.5.2
+lib/libdeal_II.so.9.6.1
 %%DATADIR%%/macros/macro_deal_ii_add_test.cmake
 %%DATADIR%%/macros/macro_deal_ii_initialize_cached_variables.cmake
 %%DATADIR%%/macros/macro_deal_ii_invoke_autopilot.cmake
diff --git a/math/hyperdeal/Makefile b/math/hyperdeal/Makefile
index 994fbccec520..64f463039a67 100644
--- a/math/hyperdeal/Makefile
+++ b/math/hyperdeal/Makefile
@@ -1,5 +1,6 @@
 PORTNAME=	hyperdeal
 DISTVERSION=	g20230706
+PORTREVISION=	1
 CATEGORIES=	math
 
 PATCH_SITES=	https://github.com/${GH_ACCOUNT}/${GH_PROJECT}/commit/