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Mon, 9 Dec 2024 21:59:21 GMT (envelope-from git) Date: Mon, 9 Dec 2024 21:59:21 GMT Message-Id: <202412092159.4B9LxLj2053423@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-branches@FreeBSD.org From: Yuri Victorovich Subject: git: e17ba537c699 - 2024Q4 - biology/fastani: Broken where OpenMP isn't available; Update WWW List-Id: Commit messages for all branches of the ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-all List-Help: List-Post: List-Subscribe: List-Unsubscribe: X-BeenThere: dev-commits-ports-all@freebsd.org Sender: owner-dev-commits-ports-all@FreeBSD.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: yuri X-Git-Repository: ports X-Git-Refname: refs/heads/2024Q4 X-Git-Reftype: branch X-Git-Commit: e17ba537c6998bfbb3cf7542a66ab66292211cc1 Auto-Submitted: auto-generated The branch 2024Q4 has been updated by yuri: URL: https://cgit.FreeBSD.org/ports/commit/?id=e17ba537c6998bfbb3cf7542a66ab66292211cc1 commit e17ba537c6998bfbb3cf7542a66ab66292211cc1 Author: Yuri Victorovich AuthorDate: 2024-11-03 05:45:54 +0000 Commit: Yuri Victorovich CommitDate: 2024-12-09 21:59:19 +0000 biology/fastani: Broken where OpenMP isn't available; Update WWW Reported by: fallout (cherry picked from commit 72e82b9c563912ee65f656d9aaba164fc9f3d0f8) --- biology/fastani/Makefile | 6 +++++- 1 file changed, 5 insertions(+), 1 deletion(-) diff --git a/biology/fastani/Makefile b/biology/fastani/Makefile index 5608f01a847f..2d77344aac34 100644 --- a/biology/fastani/Makefile +++ b/biology/fastani/Makefile @@ -5,7 +5,7 @@ CATEGORIES= biology MAINTAINER= yuri@FreeBSD.org COMMENT= Fast Whole-Genome Similarity (ANI) Estimation -WWW= https://github.com/shenwei356/unikmer/ +WWW= https://github.com/ParBLiSS/FastANI LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE @@ -14,6 +14,10 @@ LIB_DEPENDS= libgsl.so:math/gsl USES= cmake:testing +.if !exists(/usr/include/omp.h) +BROKEN= build w/out OpenMP support still attempts to use omp.h, see https://github.com/ParBLiSS/FastANI/issues/139 +.endif + USE_GITHUB= yes GH_ACCOUNT= ParBLiSS GH_PROJECT= FastANI