From nobody Wed May 31 15:41:36 2023 X-Original-To: dev-commits-ports-all@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4QWYQm4jJgz4Ysls; Wed, 31 May 2023 15:41:36 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4QWYQm4Jwnz4P8j; Wed, 31 May 2023 15:41:36 +0000 (UTC) (envelope-from git@FreeBSD.org) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1685547696; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=aJfVUjG8eiMuUCzsRfCYrS5MTC1bB+Gii3yS0jl2XJY=; b=xf9uem/pAqOmrDX+8ZxRFaxTG3UINhPucVIFIj8g0IimwcmRaOhuWTu9TGl3PrH3sO3bui N2AA12wSflhwMBZHxjteXb8xtUpaf8Vitu6PFVIYF4bqdzgzniCGAwAnKU5G/ew82royvH orrMeCmQ2wt9NoSzMBt4sozlF0R5kNPv6jqEUQYCzFswWs1J0EmHk9thQZQq3wnSxJcX2B HHzEzKhwEz3MY9oxu1N5ojTyCzNielHvlG6lwkD9jv4QdIdM66okxx+E0RIl4hAgJoNt9x RdmQQ8sGTbNwE/CHt8cpwX+LalmWdFa3mB4VJUDAxP2Rcy3T4Fd200YFGvdI8g== ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1685547696; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=aJfVUjG8eiMuUCzsRfCYrS5MTC1bB+Gii3yS0jl2XJY=; b=Zx9U+5ztpLPiwDVs5jw5qV7S7NTsS3QRwwyH+TElTptOA5VzzV+13DuqPF08B98VeivzY2 cm1t5SMX3FwXmm3M4QDEXeOiaCMJt7Q8lFFKSeO65wHvZyD6evBdQL2DuEKjBBpmzVZJZ7 AG30XAv9XkQ+eziscaHtY+39dLh+0xw9QYeYRR4P9d98rrHTumJH+24vCkiOmft6d/hv/5 4T4qyib/CXASENLfvAjP4hgfznHI2NhVGAhEHK8qphgGssaZ+Wg/DmRZeJO+w1ROTDUc1P tSQlJd5b2aWPzulHTMPx4qPrPOPanPYIxpZ4qHc9Sdo9myOyTzlCG02c9N1B/w== ARC-Authentication-Results: i=1; mx1.freebsd.org; none ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1685547696; a=rsa-sha256; cv=none; b=TiGzk9HiAzEOJJf6BHA9HnwHR4uWUVJs9IYb/Ac0idSdxyAnJSexm/7tRYhuG8lVSERomm FI+hmNiOeFGcN34uniYw/RhMQZ/zrZnydKOjfRplSnFsE66ddMHc5JHnUo1Q0rqPEvhecl WGvOwc7oSXd5Chy2POn0XEl3z7YkHho1SumYzMOP+I5BfCc4iL+ix64B68/qbcij0qQXQL A4vA2mzw98Jui9hhRRf3rM1QK7oHq0nB1dLREYUVQ3DcLIuMJPKbFFx/KKZCBumeP6TGNc PPwCuak39W/RGtZ4TmZpwRPjusrFhNugP+DH93kMt5nZIKgunWSpMUu0lY23aQ== Received: from gitrepo.freebsd.org (gitrepo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:5]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 4QWYQm3PNNzgvS; Wed, 31 May 2023 15:41:36 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from gitrepo.freebsd.org ([127.0.1.44]) by gitrepo.freebsd.org (8.16.1/8.16.1) with ESMTP id 34VFfaoQ056022; Wed, 31 May 2023 15:41:36 GMT (envelope-from git@gitrepo.freebsd.org) Received: (from git@localhost) by gitrepo.freebsd.org (8.16.1/8.16.1/Submit) id 34VFfa35056021; Wed, 31 May 2023 15:41:36 GMT (envelope-from git) Date: Wed, 31 May 2023 15:41:36 GMT Message-Id: <202305311541.34VFfa35056021@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: "Jason W. Bacon" Subject: git: 8b9ae52ebb8c - main - biology/fastp: Update to 0.23.4 List-Id: Commit messages for all branches of the ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-all List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-dev-commits-ports-all@freebsd.org X-BeenThere: dev-commits-ports-all@freebsd.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: jwb X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: 8b9ae52ebb8c82a291c64a86a02607ccf3337737 Auto-Submitted: auto-generated X-ThisMailContainsUnwantedMimeParts: N The branch main has been updated by jwb: URL: https://cgit.FreeBSD.org/ports/commit/?id=8b9ae52ebb8c82a291c64a86a02607ccf3337737 commit 8b9ae52ebb8c82a291c64a86a02607ccf3337737 Author: Jason W. Bacon AuthorDate: 2023-05-31 15:40:00 +0000 Commit: Jason W. Bacon CommitDate: 2023-05-31 15:40:00 +0000 biology/fastp: Update to 0.23.4 Fix regression in FASTQ reader Changes: https://github.com/OpenGene/fastp/releases Reported by: portscout --- biology/fastp/Makefile | 5 +---- biology/fastp/distinfo | 6 +++--- 2 files changed, 4 insertions(+), 7 deletions(-) diff --git a/biology/fastp/Makefile b/biology/fastp/Makefile index 42720400d7f0..ddd4d84876b1 100644 --- a/biology/fastp/Makefile +++ b/biology/fastp/Makefile @@ -1,6 +1,6 @@ PORTNAME= fastp DISTVERSIONPREFIX= v -DISTVERSION= 0.23.3 +DISTVERSION= 0.23.4 CATEGORIES= biology MAINTAINER= jwb@FreeBSD.org @@ -15,9 +15,6 @@ LIB_DEPENDS= libdeflate.so:archivers/libdeflate \ USES= gmake localbase:ldflags USE_GITHUB= yes -# FIXME: Neglected to document what gcc is needed. -# Investigate and remove if possible. -USE_GCC= yes GH_ACCOUNT= OpenGene diff --git a/biology/fastp/distinfo b/biology/fastp/distinfo index bbad3e93cd45..1c215d4d8906 100644 --- a/biology/fastp/distinfo +++ b/biology/fastp/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1684079755 -SHA256 (OpenGene-fastp-v0.23.3_GH0.tar.gz) = a37ee4b5dcf836a5a19baec645657b71d9dcd69ee843998f41f921e9b67350e3 -SIZE (OpenGene-fastp-v0.23.3_GH0.tar.gz) = 164057 +TIMESTAMP = 1685547158 +SHA256 (OpenGene-fastp-v0.23.4_GH0.tar.gz) = 4fad6db156e769d46071add8a778a13a5cb5186bc1e1a5f9b1ffd499d84d72b5 +SIZE (OpenGene-fastp-v0.23.4_GH0.tar.gz) = 164071